tInitial commit - petsc-git-PKGBUILD - build template for non-complex PETSC with petsc4py
(HTM) git clone git://src.adamsgaard.dk/petsc-git-PKGBUILD
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---
(DIR) commit d5b93df3eee209906e2a6ed1bc7cce1187af1ca9
(HTM) Author: Lucas Heitzmann Gabrielli <heitzmann@gmail.com>
Date: Tue, 5 Feb 2019 12:41:18 -0200
Initial commit
Diffstat:
A .SRCINFO | 27 +++++++++++++++++++++++++++
A PKGBUILD | 119 +++++++++++++++++++++++++++++++
A patch.diff | 13 +++++++++++++
A petsc.install | 9 +++++++++
4 files changed, 168 insertions(+), 0 deletions(-)
---
(DIR) diff --git a/.SRCINFO b/.SRCINFO
t@@ -0,0 +1,27 @@
+pkgbase = petsc-git
+ pkgdesc = Portable, extensible toolkit for scientific computation
+ pkgver = 20190205
+ pkgrel = 1
+ url = https://www.mcs.anl.gov/petsc/
+ install = petsc.install
+ arch = i686
+ arch = x86_64
+ license = BSD
+ makedepends = gcc
+ makedepends = gcc-fortran
+ makedepends = cmake
+ depends = python2
+ depends = openmpi
+ depends = boost
+ depends = lapack
+ depends = fftw
+ depends = hdf5
+ provides = petsc
+ conflicts = petsc
+ source = petsc::git+https://bitbucket.org/petsc/petsc#branch=maint
+ source = patch.diff
+ sha256sums = SKIP
+ sha256sums = fdf016437dd94f33316e734e35858476aeea1ca0f3ab4d0ee36029b016498de7
+
+pkgname = petsc-git
+
(DIR) diff --git a/PKGBUILD b/PKGBUILD
t@@ -0,0 +1,119 @@
+# Maintainer: Lucas H. Gabrielli <heitzmann at gmail dot com>
+
+pkgname=petsc-git
+pkgver=20190205
+pkgrel=1
+_config=linux-c-opt
+pkgdesc="Portable, extensible toolkit for scientific computation"
+provides=(petsc)
+conflicts=(petsc)
+arch=('i686' 'x86_64')
+url="https://www.mcs.anl.gov/petsc/"
+license=('BSD')
+depends=('python2' 'openmpi' 'boost' 'lapack' 'fftw' 'hdf5')
+makedepends=('gcc' 'gcc-fortran' 'cmake')
+install=petsc.install
+source=(petsc::git+https://bitbucket.org/petsc/petsc#branch=maint
+ patch.diff)
+sha256sums=('SKIP'
+ 'fdf016437dd94f33316e734e35858476aeea1ca0f3ab4d0ee36029b016498de7')
+
+_petsc_arch="arch-${_config}"
+
+
+pkgver() {
+ cd petsc
+ git log --format="%cd" --date=short -1 | sed 's/-//g'
+}
+
+
+prepare() {
+ # force using python2
+ MATCH='\(/usr/bin/env\|/usr/bin/\)python[[:digit:].]*'
+ while IFS= read file; do
+ sed -i "s#$MATCH#\\1python2#" "$file"
+ done < <( find ${srcdir} -name "*" -type f -exec grep -le "$MATCH" \{\} + )
+
+ cd "${srcdir}/petsc"
+ patch -p1 < ../patch.diff
+}
+
+
+build() {
+ cd petsc
+
+ CONFOPTS='--with-shared-libraries=1 --COPTFLAGS=-O3 --CXXOPTFLAGS=-O3 --with-cxx-dialect=C++11 --with-mpi=1 --with-fftw=1 --with-hdf5=1 --with-zlib=1'
+
+ # if --with-debugging=1 is set then PETSC_ARCH is automatically set to
+ # "linux-c-debug" for some things, so _config should be changed to "linux-c-debug"
+ #CONFOPTS="${CONFOPTS} --with-debugging=1"
+
+ for external_pkg in amd eigen hypre metis mumps parmetis party pastix ptscotch scalapack suitesparse sundials superlu superlu_dist
+ do
+ CONFOPTS="${CONFOPTS} --download-${external_pkg}=1"
+ done
+
+ export PETSC_DIR="${srcdir}/petsc"
+ export PETSC_ARCH="${_petsc_arch}"
+
+ python2 ./configure LDFLAGS="$LDFLAGS" --prefix=/opt/petsc/${_config} ${CONFOPTS}
+
+ make all
+}
+
+
+package() {
+ cd petsc
+
+ _build_dir="${srcdir}/petsc"
+ _install_dir=/opt/petsc/${_config}
+
+ export PETSC_DIR=${_build_dir}
+ export PETSC_ARCH="${_petsc_arch}"
+
+ make DESTDIR="${pkgdir}" install
+
+ # documentation
+ # Note: the hyperlinks between documentation, tutorials and examples are
+ # not perfect yet
+ #mkdir -p ${pkgdir}/usr/share/doc/petsc/
+ #cp -r ${_build_dir}/docs ${pkgdir}/usr/share/doc/petsc/
+
+ # src for tutorials
+ #find ./src -path '*examples*' -type f -exec \
+ # install -Dm 644 "{}" "${pkgdir}/usr/share/doc/petsc/{}" \;
+
+ # html versions of header files
+ #mkdir -p ${pkgdir}/usr/share/doc/petsc/include
+ #cp -r ${_build_dir}/include/*.html ${pkgdir}/usr/share/doc/petsc/include/
+
+ # install licence (even though there is no such word as licenses)
+ install -Dm 644 ${_build_dir}/LICENSE ${pkgdir}/usr/share/licenses/${pkgname}/LICENSE
+
+ mkdir -p "${pkgdir}/etc/profile.d"
+ echo "export PETSC_DIR=${_install_dir}" > "${pkgdir}/etc/profile.d/petsc.sh"
+ chmod +x "${pkgdir}/etc/profile.d/petsc.sh"
+
+ # show where the shared libraries are
+ install -dm 755 "${pkgdir}/etc/ld.so.conf.d/"
+ echo "${_install_dir}/lib" > "${pkgdir}/etc/ld.so.conf.d/petsc.conf"
+
+ sed -i "s#-L${_build_dir}/${_petsc_arch}/lib ##" "${pkgdir}${_install_dir}/lib/pkgconfig/PETSc.pc"
+ sed -i \
+ -e "s#prefix=.*#prefix=${_install_dir}#" \
+ -e "s#libdir=.*#libdir=\${prefix}/lib#" \
+ -e "s#includedir=.*#includedir=\${prefix}/include#" \
+ "${pkgdir}${_install_dir}/lib/pkgconfig/superlu.pc"
+ sed -i \
+ -e "s#prefix=.*#prefix=${_install_dir}#" \
+ -e "s#libdir=.*#libdir=\${prefix}/lib#" \
+ -e "s#includedir=.*#includedir=\${prefix}/include#" \
+ "${pkgdir}${_install_dir}/lib/pkgconfig/superlu_dist.pc"
+ sed -i \
+ -e "s#prefix=.*#prefix=${_install_dir};#" \
+ -e "s#libdir=.*#libdir=\${prefix}/lib;#" \
+ "${pkgdir}${_install_dir}/lib/petsc/bin/sundials-config"
+
+ # install pkgconfig settings
+ #install -Dm 644 "${_build_dir}/${_petsc_arch}/lib/pkgconfig/PETSc.pc" "${pkgdir}/usr/share/pkgconfig/PETSc.pc"
+}
(DIR) diff --git a/patch.diff b/patch.diff
t@@ -0,0 +1,13 @@
+diff --git a/config/BuildSystem/config/package.py b/config/BuildSystem/config/package.py
+index d7777d623b..9dfcf66cee 100644
+--- a/config/BuildSystem/config/package.py
++++ b/config/BuildSystem/config/package.py
+@@ -60,7 +60,7 @@ class Package(config.base.Configure):
+ self.excludedDirs = [] # list of directory names that could be false positives, SuperLU_DIST when looking for SuperLU
+ self.downloadonWindows = 0 # 1 means the --download-package works on Microsoft Windows
+ self.requirescxx11 = 0
+- self.publicInstall = 1 # Installs the package in the --prefix directory if it was given. Packages that are only used
++ self.publicInstall = 0 # Installs the package in the --prefix directory if it was given. Packages that are only used
+ # during the configuration/installation process such as sowing, make etc should be marked as 0
+ self.parallelMake = 1 # 1 indicates the package supports make -j np option
+
(DIR) diff --git a/petsc.install b/petsc.install
t@@ -0,0 +1,9 @@
+post_install() {
+source /etc/profile.d/petsc.sh
+}
+
+post_upgrade() {
+post_install
+}
+
+# vim:set ts=2 sw=2 et: