tUpdate publication list - sphere - GPU-based 3D discrete element method algorithm with optional fluid coupling
 (HTM) git clone git://src.adamsgaard.dk/sphere
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 (DIR) LICENSE
       ---
 (DIR) commit fe991f9a76dc5f80931b523ad11fd5d4a526110e
 (DIR) parent 6a26c98ac0803ad905ddd315980198fe20595c8c
 (HTM) Author: Anders Damsgaard <andersd@riseup.net>
       Date:   Wed, 20 Dec 2017 17:28:32 -0800
       
       Update publication list
       
       Diffstat:
         M README.rst                          |      19 ++++++++++++-------
       
       1 file changed, 12 insertions(+), 7 deletions(-)
       ---
 (DIR) diff --git a/README.rst b/README.rst
       t@@ -12,9 +12,9 @@ Navier-Stokes or Darcy formulations.
        A powerful Nvidia GPU with proper support for double precision floating is
        highly recommended. ``sphere`` has been tested with Nvidia Tesla GPUs, and has 
        successfully been employed on the clusters `Grendel 
       -<http://www.cscaa.dk/grendel/hardware/>`_ (Aarhus University), `ICME 
       +<https://www.cscaa.dk/grendel/hardware/>`_ (Aarhus University), `ICME 
        <https://icme.stanford.edu/computer-resources/gpu-cluster>`_ (Stanford 
       -University), `Comet <http://www.sdsc.edu/services/hpc/hpc_systems.html#comet>`_ 
       +University), `Comet <https://www.sdsc.edu/services/hpc/hpc_systems.html#comet>`_ 
        (San Diego Supercomputing Center),  `Bridges 
        <https://psc.edu/index.php/resources/computing/bridges>`_ (Portland 
        Supercomputing Center), and `Stampede <https://www.tacc.utexas.edu/stampede/>`_ 
       t@@ -81,7 +81,7 @@ the `html <doc/html/index.html>`_ and `pdf <doc/pdf/sphere.pdf>`_ formats.
        
        Examples
        --------
       -All examples are visualized using `ParaView <http://www.paraview.org>`_.
       +All examples are visualized using `ParaView <https://www.paraview.org>`_.
        
        .. figure:: doc/sphinx/img/stokes.png
           :scale: 75%
       t@@ -109,19 +109,24 @@ Publications
        ``sphere`` has been used to produce results in the following scientific
        publications and presentations:
        
       +- Damsgaard, A., J. Suckale, J. A. Piotrowski, M. Houssais, M. R. Siegfried, H.
       +  A. Fricker (2017), Sediment behavior controls equilibrium width of subglacial
       +  channels, Journal of Glaciology, 
       +  `doi:10.1017/jog.2017.71 
       +  <https://doi.org/10.1017/jog.2017.71>`_.
        - Damsgaard, A., A. Cabrales-Vargas, J. Suckale, and L. Goren (2017), The 
          coupled dynamics of meltwater percolation and granular deformation in the 
          sediment layer underlying parts of the big ice sheets, Poromechanics VI, 
          `doi:10.1061/9780784480779.024 
       -  <https://dx.doi.org/10.1061/9780784480779.024>`_.
       +  <https://doi.org/10.1061/9780784480779.024>`_.
        - Damsgaard, A., D.L. Egholm, L.H. Beem, S. Tulaczyk, N.K. Larsen, J.A.  
          Piotrowski, and M.R. Siegfried (2016), Ice flow dynamics forced by water 
          pressure variations in subglacial granular beds, Geophysical Research Letters, 
       -  43, `doi:10.1002/2016GL071579 <http://dx.doi.org/10.1002/2016GL071579>`_.
       +  43, `doi:10.1002/2016GL071579 <https://doi.org/10.1002/2016GL071579>`_.
        - Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, N.K. Larsen, and
          C.F. Brædstrup (2015), A new methodology to simulate subglacial deformation of
          water-saturated granular material, The Cryosphere, 9, 2183-2200,
       -  `doi:10.5194/tc-9-2183-2015 <http://dx.doi.org/10.5194/tc-9-2183-2015>`_.
       +  `doi:10.5194/tc-9-2183-2015 <https://doi.org/10.5194/tc-9-2183-2015>`_.
        - Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, N.K. Larsen, and
          C.F. Brædstrup (2014), Numerical modeling of particle-fluid mixtures in a
          subglacial setting. `Poster at Americal Geophysical Union Fall Meeting
       t@@ -129,7 +134,7 @@ publications and presentations:
        - Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, N.K. Larsen, and
          K. Tylmann (2013), Discrete element modeling of subglacial sediment
          deformation, J. Geophys. Res. Earth Surf., 118, 2230–2242,
       -  `doi:10.1002/2013JF002830 <http://dx.doi.org/10.1002/2013JF002830>`_.
       +  `doi:10.1002/2013JF002830 <https://doi.org/10.1002/2013JF002830>`_.
        - Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, and N.K. Larsen
          (2013), Discrete element modeling of subglacial sediment deformation.
          Talk at American Geophysical Fall Meeting 2013.