tadd extra simulations with larger A values - sphere - GPU-based 3D discrete element method algorithm with optional fluid coupling
 (HTM) git clone git://src.adamsgaard.dk/sphere
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       ---
 (DIR) commit 987ae24511a34ef79f5af6edc429d95d125e6cc5
 (DIR) parent d1cb80136671adac63c1c26cf3de6b016e3cd375
 (HTM) Author: Anders Damsgaard <anders.damsgaard@geo.au.dk>
       Date:   Tue,  5 May 2015 21:07:46 +0200
       
       add extra simulations with larger A values
       
       Diffstat:
         A python/wip-varA2-cont.sh            |      49 +++++++++++++++++++++++++++++++
         A python/wip-varA2.sh                 |      50 +++++++++++++++++++++++++++++++
       
       2 files changed, 99 insertions(+), 0 deletions(-)
       ---
 (DIR) diff --git a/python/wip-varA2-cont.sh b/python/wip-varA2-cont.sh
       t@@ -0,0 +1,49 @@
       +#!/bin/sh
       +#PBS -N wip-varA2
       +#PBS -l nodes=1:ppn=3
       +#PBS -l walltime=48:00:00
       +#PBS -q qfermi
       +#PBS -M adc@geo.au.dk
       +#PBS -m abe
       +
       +# Grendel CUDA
       +source /com/gcc/4.6.4/load.sh
       +CUDAPATH=/com/cuda/5.5.22
       +export PATH=$HOME/bin:$PATH
       +export PATH=$CUDAPATH/bin:$PATH
       +export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH
       +
       +# Manually installed Python modules
       +export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH
       +export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH
       +
       +# Manually installed Python
       +#export PATH=/home/adc/.local/bin:$PATH
       +
       +# Shared Python2.7
       +PYTHON=/com/python/2.7.6
       +export PYTHONPATH=$PYTHON/lib:$PYTHONPATH
       +export PATH=$PYTHON/bin:$PATH
       +
       +echo "`whoami`@`hostname`"
       +echo "Start at `date`"
       +
       +ORIGDIR=/home/adc/code/sphere
       +#WORKDIR=/scratch/$PBS_JOBID
       +WORKDIR=$ORIGDIR
       +
       +#cp -r $ORIGDIR/* $WORKDIR
       +
       +cd $WORKDIR
       +nvidia-smi
       +rm CMakeCache.txt
       +cmake . && make
       +cd python
       +python continue_sim.py halfshear-darcy-sigma0=10000.0-k_c=2e-16-mu=2.08e-07-ss=2000.0-A=4625.0-f=0.2 1 0 &
       +python continue_sim.py halfshear-darcy-sigma0=10000.0-k_c=2e-16-mu=2.08e-07-ss=2000.0-A=4750.0-f=0.2 1 1 &
       +python continue_sim.py halfshear-darcy-sigma0=10000.0-k_c=2e-16-mu=2.08e-07-ss=2000.0-A=4875.0-f=0.2 1 2 &
       +wait
       +
       +#cp $WORKDIR/output/* $ORIGDIR/output/
       +
       +echo "End at `date`"
 (DIR) diff --git a/python/wip-varA2.sh b/python/wip-varA2.sh
       t@@ -0,0 +1,50 @@
       +#!/bin/sh
       +#PBS -N wip-varA2
       +#PBS -l nodes=1:ppn=3
       +#PBS -l walltime=48:00:00
       +#PBS -q qfermi
       +#PBS -M adc@geo.au.dk
       +#PBS -m abe
       +
       +# Grendel CUDA
       +source /com/gcc/4.6.4/load.sh
       +CUDAPATH=/com/cuda/5.5.22
       +export PATH=$HOME/bin:$PATH
       +export PATH=$CUDAPATH/bin:$PATH
       +export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH
       +
       +# Manually installed Python modules
       +export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH
       +export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH
       +
       +# Manually installed Python
       +#export PATH=/home/adc/.local/bin:$PATH
       +
       +# Shared Python2.7
       +PYTHON=/com/python/2.7.6
       +export PYTHONPATH=$PYTHON/lib:$PYTHONPATH
       +export PATH=$PYTHON/bin:$PATH
       +
       +echo "`whoami`@`hostname`"
       +echo "Start at `date`"
       +
       +ORIGDIR=/home/adc/code/sphere
       +#WORKDIR=/scratch/$PBS_JOBID
       +WORKDIR=$ORIGDIR
       +
       +#cp -r $ORIGDIR/* $WORKDIR
       +
       +cd $WORKDIR
       +nvidia-smi
       +rm CMakeCache.txt
       +cmake . && make
       +cd python
       +# $ ipython halfshear-darcy-stress-starter.py <device> <fluid> <c_phi> <k_c> <sigma_0> <mu> <shear_stress>
       +python halfshear-darcy-stress-mod-starter.py 0 1 1.0 2.0e-16 10000.0 2.08e-7 2000.0 4625.0 0.2 1.0 &
       +python halfshear-darcy-stress-mod-starter.py 1 1 1.0 2.0e-16 10000.0 2.08e-7 2000.0 4750.0 0.2 1.0 &
       +python halfshear-darcy-stress-mod-starter.py 2 1 1.0 2.0e-16 10000.0 2.08e-7 2000.0 4875.0 0.2 1.0 &
       +wait
       +
       +#cp $WORKDIR/output/* $ORIGDIR/output/
       +
       +echo "End at `date`"