itput input files to waitfolder during computations - cosmo - front and backend for Markov-Chain Monte Carlo inversion of cosmogenic nuclide concentrations	Err	mx1.adamsgaard.dk	70
hgit clone git://src.adamsgaard.dk/cosmo	URL:git://src.adamsgaard.dk/cosmo	mx1.adamsgaard.dk	70
1Log	/src/log.gph	mx1.adamsgaard.dk	70
1Files	/src/files.gph	mx1.adamsgaard.dk	70
1Refs	/src/refs.gph	mx1.adamsgaard.dk	70
1README	/src/file/README.md.gph	mx1.adamsgaard.dk	70
1LICENSE	/src/file/LICENSE.gph	mx1.adamsgaard.dk	70
i---	Err	mx1.adamsgaard.dk	70
1commit 982c44b95e99c673b67ff5a51d58b2786520db64	/src/commit/982c44b95e99c673b67ff5a51d58b2786520db64.gph	mx1.adamsgaard.dk	70
1parent 1ca0a617715320666a6a2eaf9ed90a7156057982	/src/commit/1ca0a617715320666a6a2eaf9ed90a7156057982.gph	mx1.adamsgaard.dk	70
hAuthor: Anders Damsgaard <anders.damsgaard@geo.au.dk>	URL:mailto:anders.damsgaard@geo.au.dk	mx1.adamsgaard.dk	70
iDate:   Thu,  3 Dec 2015 19:42:20 +0100	Err	mx1.adamsgaard.dk	70
i	Err	mx1.adamsgaard.dk	70
iput input files to waitfolder during computations	Err	mx1.adamsgaard.dk	70
i	Err	mx1.adamsgaard.dk	70
iDiffstat:	Err	mx1.adamsgaard.dk	70
i  M matlab/file_scanner_mcmc_starter.m  |      12 ++++++++----	Err	mx1.adamsgaard.dk	70
i	Err	mx1.adamsgaard.dk	70
i1 file changed, 8 insertions(+), 4 deletions(-)	Err	mx1.adamsgaard.dk	70
i---	Err	mx1.adamsgaard.dk	70
1diff --git a/matlab/file_scanner_mcmc_starter.m b/matlab/file_scanner_mcmc_starter.m	/src/file/matlab/file_scanner_mcmc_starter.m.gph	mx1.adamsgaard.dk	70
it@@ -71,6 +71,9 @@ while 1	Err	mx1.adamsgaard.dk	70
i         % read full file name and path	Err	mx1.adamsgaard.dk	70
i         infile = strcat(infolder, '/', infiles(i).name);	Err	mx1.adamsgaard.dk	70
i         	Err	mx1.adamsgaard.dk	70
i+        % move to waitfolder	Err	mx1.adamsgaard.dk	70
i+        movefile(infile, waitfolder);	Err	mx1.adamsgaard.dk	70
i+        	Err	mx1.adamsgaard.dk	70
i         idstring = strsplit(infile, '_');	Err	mx1.adamsgaard.dk	70
i         id = idstring(2);	Err	mx1.adamsgaard.dk	70
i         statusfile = char(strcat(infolder, '/status_', id));	Err	mx1.adamsgaard.dk	70
it@@ -80,7 +83,7 @@ while 1	Err	mx1.adamsgaard.dk	70
i             disp(infile);	Err	mx1.adamsgaard.dk	70
i             disp(strcat('Simulation id: ', id));	Err	mx1.adamsgaard.dk	70
i         end	Err	mx1.adamsgaard.dk	70
i-        	Err	mx1.adamsgaard.dk	70
i+	Err	mx1.adamsgaard.dk	70
i         % read file and save data to local scope	Err	mx1.adamsgaard.dk	70
i         [sample_id, name, email, lat, long, ...	Err	mx1.adamsgaard.dk	70
i             be_conc,  al_conc,  c_conc,  ne_conc, ...	Err	mx1.adamsgaard.dk	70
it@@ -140,7 +143,8 @@ while 1	Err	mx1.adamsgaard.dk	70
i         	Err	mx1.adamsgaard.dk	70
i         % delete or archive the file so it is not processed again	Err	mx1.adamsgaard.dk	70
i         %delete(infile)	Err	mx1.adamsgaard.dk	70
i-        movefile(infile, archivefolder);	Err	mx1.adamsgaard.dk	70
i+        %movefile(infile, archivefolder);	Err	mx1.adamsgaard.dk	70
i+        movefile(char(strcat(waitfolder, '/cosmo_', id)), archivefolder);	Err	mx1.adamsgaard.dk	70
i         	Err	mx1.adamsgaard.dk	70
i         fid = fopen(statusfile, 'w');	Err	mx1.adamsgaard.dk	70
i         fprintf(fid, 'Computations complete');	Err	mx1.adamsgaard.dk	70
it@@ -150,8 +154,8 @@ while 1	Err	mx1.adamsgaard.dk	70
i         	Err	mx1.adamsgaard.dk	70
i         diary off;	Err	mx1.adamsgaard.dk	70
i         	Err	mx1.adamsgaard.dk	70
i-        % sleep 1 second in order to reduce system load	Err	mx1.adamsgaard.dk	70
i-        pause(1)	Err	mx1.adamsgaard.dk	70
i+        % sleep in order to reduce system load	Err	mx1.adamsgaard.dk	70
i+        pause(5)	Err	mx1.adamsgaard.dk	70
i         	Err	mx1.adamsgaard.dk	70
i         %keyboard	Err	mx1.adamsgaard.dk	70
i     end	Err	mx1.adamsgaard.dk	70
.