[HN Gopher] OpenVertebrate Presents a Database of 13,000 3D Scan...
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       OpenVertebrate Presents a Database of 13,000 3D Scans of Specimens
        
       Author : exikyut
       Score  : 158 points
       Date   : 2025-04-05 02:15 UTC (20 hours ago)
        
 (HTM) web link (www.openculture.com)
 (TXT) w3m dump (www.openculture.com)
        
       | exikyut wrote:
       | 3D objects viewable in-browser can be found here:
       | https://sketchfab.com/FloridaMuseum/models
       | 
       | So far about 800 objects have been uploaded, including within the
       | past fortnight.
       | 
       | Some noninteractive colour images are available here:
       | https://www.floridamuseum.ufl.edu/overt/gallery/
        
         | gnabgib wrote:
         | They're in a number of places, but the most complete seems to
         | be morphosource:
         | 
         | https://www.morphosource.org/projects/000368762 (17867 scans,
         | 10920 specimens)
        
         | Daub wrote:
         | The Sketchfab collection seems to have been set to non-
         | downloadable. The morphsource collection can be downloaded, but
         | only as an image sequence, not as 3D meshes. Fairly easy to
         | convert images sequence to mesh, but I wish they had made the
         | task more straightforward.
        
           | Daub wrote:
           | I take it back. The volumetric image series format of
           | morphsource is not agreeable to being easily converted to
           | mesh objects.
        
           | exDM69 wrote:
           | There are meshes in morphosource too. Didn't try downloading
           | any but they are available as STL files with 1-2 million
           | polygons per model. Some meshes are individual bones or
           | skulls, others are complete specimens. The interface is a bit
           | clumsy but you can use "mesh" in your search string
        
             | Daub wrote:
             | Thanks. I will re-look.
        
       | gnabgib wrote:
       | (2024) Original source:
       | https://www.floridamuseum.ufl.edu/science/scientists-ct-scan...
        
       | quasarj wrote:
       | Do they share the original CT scans?
        
         | vincnetas wrote:
         | Looks like yes. For example here :
         | https://www.morphosource.org/concern/media/000727606?locale=...
        
       | vincnetas wrote:
       | Ok so whas looking where to actually download the models. Looks
       | its here:
       | 
       | https://www.morphosource.org/catalog/media?locale=en
       | 
       | But you need to register account and file a request for each
       | download.
       | 
       | Edit: ok there is a filter option "Publication Status: Open
       | Download" which gives you download without filing a request.
        
       | jmakov wrote:
       | Errot 405
        
       | slimbuck wrote:
       | Some of these would be better converted to 3dgs.
        
       | pmags wrote:
       | Note that MorphoSource is precisely the type of scientific
       | resource that will be lost if Trump, Elon, and the DOGE-ies have
       | their way.
       | 
       | This has been jointly funded by NSF and the investigators home
       | institution (Duke).
       | 
       | Scientific databases, like this, but also many model organism
       | genome databases have already been at risk because maintaining
       | and curating high quality data is often seen as "not sexy
       | enough". Many such resources are being forced to consider
       | subscription models (e.g. [1]) to "keep the lights on".
       | Ironically such resources are in fact critical for modern, high
       | impact science.
       | 
       | This is only going to get worse as the Trumpists and DOGE-ies
       | continue to kneecap NIH, NSF, and other critical parts of our
       | infrastructure.
       | 
       | [1] https://veupathdb.org/veupathdb/app/static-
       | content/subscript...
        
       | seabass-labrax wrote:
       | I find these kinds of projects really exciting. Does anyone know
       | if the people behind this project have any connection to
       | #ScanAllFish[1], which was also featured on Hacker News last
       | year[2]?
       | 
       | [1]: https://www.adamsummers.org/scanallfish
       | 
       | [2]: https://news.ycombinator.com/item?id=40021458
        
       | mzajc wrote:
       | > Error 405 Slovenian users must use proxy.
       | 
       | The project sounds interesting, but I can't see what it's about
       | because they've apparently blacklisted (?) my entire country.
       | 
       | ETA: Looks like this is just a news article. Perhaps linking the
       | (less discriminatory) primary source would be a better idea:
       | https://www.floridamuseum.ufl.edu/overt/gallery/
        
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       (page generated 2025-04-05 23:01 UTC)