[HN Gopher] Tubeworms live around deep-sea vents
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       Tubeworms live around deep-sea vents
        
       Author : marban
       Score  : 82 points
       Date   : 2024-10-17 17:41 UTC (1 days ago)
        
 (HTM) web link (www.economist.com)
 (TXT) w3m dump (www.economist.com)
        
       | blakesterz wrote:
       | The study is here:
       | 
       | https://www.nature.com/articles/s41467-024-52631-9
       | 
       | Lots of cool pictures if you like oceanography stuff.
        
         | mmooss wrote:
         | It includes the actual photos of the animals in the subseafloor
         | crust:
         | 
         | https://www.nature.com/articles/s41467-024-52631-9/figures/2
         | 
         | https://www.nature.com/articles/s41467-024-52631-9/figures/3
        
       | bityard wrote:
       | paywall'd
        
         | herdymerzbow wrote:
         | https://archive.is/I23NT
        
         | ninalanyon wrote:
         | Works for me.
        
       | 1egg0myegg0 wrote:
       | Are we in the Dune timeline?
        
         | Tagbert wrote:
         | Yes, but we have to get through the Butlerian Jihad first.
        
           | pineaux wrote:
           | This will inevitably happen. Life is more robust than
           | electronic systems. The electronic systems will be destroyed
           | for their aggression.
        
             | avaldez_ wrote:
             | >Life is more robust than electronic systems. The
             | electronic systems will be destroyed for their aggression.
             | 
             | Compelling argument. However from the moment I understood
             | the weakness of my flesh, it disgusted me. I craved the
             | strength and certainty of steel. I aspired to the purity of
             | the Blessed Machine. Your kind cling to your flesh, as
             | though it will not decay and fail you. One day the crude
             | biomass you call a temple will wither, and you will beg my
             | kind to save you. But I am already saved, for the Machine
             | is immortal.
             | 
             | Jokes aside life may be more robust but in a very narrow
             | set of conditions where it evolved. Look at Mars for
             | example. No life (as far as we know) but three robots
             | happily wandering like _what do you mean this planet isn 't
             | habitable? Atmosphere? Biomass? Planetary magnetic field?
             | Tell me more_
        
               | alserio wrote:
               | but those robots are also robust only in a narrow set of
               | conditions: the short frame of their operative lifetime.
               | life can survive in extremely harsh conditions for eons.
               | really just a different subset of the conditons space,
               | arguably bigger. life tends to, uh, find a way
        
               | grvbck wrote:
               | >However from the moment I understood the weakness of my
               | flesh, it disgusted me.
               | 
               |  _I don 't want to be human! I want to see gamma rays! I
               | want to hear X-rays! And I want to - I want to smell dark
               | matter! Do you see the absurdity of what I am? I can't
               | even express these things properly because I have to - I
               | have to conceptualize complex ideas in this stupid
               | limiting spoken language! But I know I want to reach out
               | with something other than these prehensile paws! And feel
               | the wind of a supernova flowing over me! I'm a machine!_
        
             | VladimirGolovin wrote:
             | I wonder, is an electronic system capable of doing anti-
             | entropy work on itself (the way life does) necessarily AGI-
             | complete? It turns out that there are many complex
             | behaviors (like drawing or generating sensible text) that
             | don't require AGI-completeness.
             | 
             | (Stumbled upon the answer while formulating the question -
             | no, being capable of doing anti-entropy self-maintenance
             | work isn't AGI-complete because there's plenty of life
             | that's perfectly capable of that without being generally
             | intelligent.)
        
       | ruleryak wrote:
       | https://archive.is/I23NT - mirrored
       | 
       | I won't pretend to be a biologist, so forgive me if this is
       | naive, but this does feel like it's at least within the realm of
       | possibility of working similarly on Europa, right? As in a non-
       | zero chance at least.
        
         | jl6 wrote:
         | It would be bold to declare it _im_ possible. We know so little
         | about abiogenesis. There might be a critical ingredient or
         | condition that Earth had which Europa lacks.
         | 
         | Or maybe not. Europa's ocean could be teeming with life.
        
           | thebruce87m wrote:
           | Discovery and detailed analysis of life on Europa in my
           | lifetime would be amazing. Even better if we can get
           | Attenborough there.
        
           | hinkley wrote:
           | Scary life that tries to eat the astronauts...
        
       | r00fus wrote:
       | There's a theory that life actually originated not directly
       | through photosynthesis based life, but originally from a very
       | constant source of energy - the earth's crust - Hyperthermophile
       | archaea - using non-oxygen based metabolism which migrated to the
       | surface where photosynthesis evolved and took over as the core
       | energy source.
       | 
       | All laid out in Paul Davies' book - fascinating read:
       | https://www.simonandschuster.com/books/The-Fifth-Miracle/Pau...
        
         | polishdude20 wrote:
         | Similar to Nick Lane's work!
        
           | vibrio wrote:
           | Oxygen is a great book that covers a lot of this from geology
           | to microbiology to chemistry.
        
         | pineaux wrote:
         | Actually this is not a theory. Photosynthesis came millions of
         | years later than life. Plants are evolved from animals, not the
         | other way around. Basic animals are less evolved than basic
         | plants.
        
           | HelloMcFly wrote:
           | Plants and animals evolved from different lineages of
           | eukaryotic organisms. They share a common ancestor, but
           | plants did not evolve from animals. Plants evolved from green
           | algae, while animals evolved from colonial protists.
           | 
           | I also take exception with the concept of "more" or "less"
           | evolved. Do you mean "complexity"?
        
             | WillPostForFood wrote:
             | He is right though that, "Photosynthesis came millions of
             | years later than life." And the parent post's claim,
             | "There's a theory that life actually originated not
             | directly through photosynthesis based life," misrepresents
             | that it is a commonly held view that life originated not
             | directly through photosynthesis based life. It is generally
             | understood that life predates photosynthesis.
        
               | Tagbert wrote:
               | Yes, they are right that photosynthesis came later, but
               | then veered way off track saying that plant evolved from
               | animals.
        
               | HelloMcFly wrote:
               | I probably should have acknowledged they were right about
               | that, but I was so jarred by what they were wrong about
               | it's the only thing that had my focus.
        
         | bmitc wrote:
         | Regarding Davies' book, what are the first four miracles that
         | the title is referencing?
        
           | tomcam wrote:
           | Turbo Pascal, Porsche 911, Mtn Dew Throwback, Scarlett
           | Johansson
           | 
           | Just spitballing, haven't read the book
        
             | sourcepluck wrote:
             | Nice
        
           | gardenmud wrote:
           | It's a Bible reference.
           | 
           | >The fifth miracle of Davies' title refers to Genesis 1:11:
           | "Let the Land Produce Vegetation." (The first four Biblical
           | miracles are the creation of the universe, the creation of
           | light, the creation of the firmament and the creation of dry
           | land.) It is proverbial in the popular science publishing
           | world that God is good for sales, especially since Steven
           | Hawking sold millions of copies of an otherwise unremarkable
           | book by promising that a unified physical theory would enable
           | us "to know the mind of God." Commercial requirements alone
           | seem to have dictated that word "miracle," since Davies
           | begins the book by disavowing it. Like other evolutionary
           | scientists he starts with the presumption that "it is the job
           | of science to solve mysteries without recourse to divine
           | intervention." Life is not a miracle because scientists wish
           | it to be a product of natural forces which they can explain.
           | 
           | - http://www.arn.org/docs/johnson/fifthmiracle.htm
        
         | dyauspitr wrote:
         | Didn't we already know that? Chloroplasts are a whole different
         | organism that was subsumed by photosynthetic organism cells
         | much later, much like mitochondria. Moreover, isn't the
         | dominant hypothesis that life originated in the primordial
         | soup, basically underwater?
        
           | adrian_b wrote:
           | The primordial soup hypothesis has been obsolete for decades.
           | 
           | It does not explain which is the source of energy. Without a
           | continuous source of energy life cannot exist.
           | 
           | Moreover, it does not explain how the soup becomes
           | concentrated enough to enable the formation of complex
           | structures. Any primordial soup would have been too dilute
           | for the dissolved substances to have chances to interact.
           | 
           | The only plausible hypotheses for the origin of life are not
           | in the middle of a soup, but at the surface of some minerals,
           | more likely inside pores in the minerals. The minerals must
           | have been metallic sulfides, more precisely sulfides of iron
           | with some content of cobalt and nickel, as these 3 metals
           | included in sulfide clusters are the catalysts for all the
           | chemical reactions that are necessary and sufficient for
           | sustaining the simplest forms of life.
           | 
           | The catalysts Fe, Co and Ni are equally important with the
           | structural non-metals H, C, N, O and S for the origin of
           | life. Life is impossible without both kinds of chemical
           | elements.
        
             | edgyquant wrote:
             | Primordial soup is not obsolete, it just isn't the whole
             | theory anymore. That the early oceans were rich with
             | minerals and proteins already is still accepted
        
               | adrian_b wrote:
               | Not even in the earliest variant of the primordial soup
               | theory there was any supposition that it contained
               | proteins.
               | 
               | About a half of the amino-acids that are contained in
               | modern proteins can form in the absence of life, and it
               | was supposed that the "soup" contained those ten amino-
               | acids.
               | 
               | The original "soup" theory did not explain how you could
               | get proteins from amino-acids. Proteins cannot form
               | within a soup, because they can form only by extracting
               | water from amino-acids, which cannot happen when they are
               | inside water. (The living cells extract the water from
               | substances like amino-acids, in order to make polymers by
               | condensation, by using special dehydrating agents that
               | are acid anhydrides; the most important classes of such
               | acid anhydrides are either polyphosphoric acids like ATP
               | or thioesters; such dehydrating agents cannot appear
               | naturally in a "soup".)
               | 
               | A way to form proteins would be not in a soup, but on
               | some rock where the water evaporates and leaves a residue
               | of amino-acids that could condense into proteins, more
               | precisely into peptides, in the absence of water. However
               | not even this is good enough to explain the appearance of
               | a self-reproducing system. Such a system can appear only
               | in a place where amino-acids are synthesized continuously
               | (like attached on the surface of minerals with catalytic
               | properties), and not like in the theory of primordial
               | soup where it was supposed that they could be synthesized
               | in the atmosphere, by lightning and UV light, then they
               | would fall in the sea, which could have never
               | concentrated them sufficiently in a single place.
               | 
               | Also the mineral ions that could have existed in a
               | primordial "soup" are not those that could have provided
               | catalytic functions. In the beginning, the primordial
               | ocean contained mostly potassium ions, and later also
               | magnesium ions, because these are the most easily leeched
               | from rocks. The primordial ocean had condensed from
               | volcanic gases and initially it contained only volatile
               | acids, like hydrogen chloride and carbonic acid. Then
               | slowly it has dissolved the more soluble parts of the
               | rocks, so that the dissolved ions, starting with
               | potassium, have neutralized the acids, and then other
               | less soluble ions have been leeched from rocks, until
               | eventually the ocean water has reached the current
               | composition of its salts, but this happened after a very
               | long time, most likely long after the appearance of life.
               | 
               | It would be very unlikely for life to appear in an ocean
               | with the current salt composition, because many of the
               | ions present now in sea water would interfere with the
               | biological chemical reactions. All the living cells that
               | are inside sea water spend a considerable part of their
               | energy with preventing undesirable ions, like sodium and
               | calcium, from entering the cells. At the origin of life,
               | such highly-efficient ion pumps could not have existed,
               | so such harmful ions must have been not abundant in the
               | ocean of that time. Therefore the probability for the
               | appearance of life is much higher on a young planet with
               | a young ocean and the probability decreases on an old
               | planet, where chemical equilibrium is reached.
               | 
               | The primordial ocean acquired relatively soon a high
               | concentration of Fe(II) ions, but those are not suitable
               | as catalysts in the form of hydrated ions. All the
               | ancient enzymes that use iron as catalyst use it in the
               | form of iron-sulfur clusters, exactly like the iron that
               | can be found in non-soluble iron sulfide minerals, so it
               | can be presumed that the original catalysts were iron
               | sulfide crystals alone, without the protein part that is
               | now attached to the iron-sulfur cluster, in order to
               | position it correctly inside the living cells.
        
         | 47282847 wrote:
         | That's how I learned it in school 30 years ago?
        
         | adrian_b wrote:
         | Actually it is beyond any reasonable doubt that the origin of
         | photosynthesis is much more recent than the origin of life.
         | 
         | The reason is that photosynthesis requires very complex
         | structures for which there exists no plausible way to appear in
         | non-living conditions, but only after a long biological
         | evolution from simpler structures.
         | 
         | Photosynthesis is much more correctly named as "phototrophy"
         | (i.e. feeding with light), because light is not used directly
         | in any synthesis, it only provides energy and in some variants,
         | not in all, it also provides reduced molecules that can be used
         | later in redox reactions (typically the so-called NADPH). The
         | name "photosynthesis" was coined at a time when nobody had any
         | idea about how it worked.
         | 
         | The so-called oxygenic phototrophy a.k.a. oxygenic
         | photosynthesis, where free dioxygen is generated by splitting
         | water, has appeared only once, in the ancestor of blue-green
         | algae a.k.a. cyanobacteria, billions of years after the origin
         | of life and a very long time after the bacteria had evolved
         | into a large number of distinct groups.
         | 
         | The anoxygenic phototrophy a.k.a. anoxygenic photosynthesis,
         | where no oxygen is generated, is still encountered in many
         | groups of bacteria, which instead of water oxidize dihydrogen
         | or carbon monoxide or reduced compounds of sulfur or of iron.
         | 
         | It is possible, but far from certain, that anoxygenic
         | phototrophy already existed in the ancestor of all present
         | bacteria. Even in the not very likely case when this were true,
         | there is no doubt that anoxygenic phototrophy has appeared
         | after a long evolution, like also the current genetic code of
         | the nucleic acids, which is also the result of a long evolution
         | from simpler genetic codes, despite the fact that there are no
         | known survivors from that early time.
         | 
         | The results of the current research leave no doubt that the
         | mechanism that has been used by the earliest forms of life for
         | obtaining energy is the one that is still used in the so-called
         | acetogenic bacteria and acetogenic archaea (a.k.a.
         | homoacetogenic bacteria and archaea). For obtaining energy,
         | these convert dihydrogen and carbon dioxide (or carbon monoxide
         | and water) into acetic acid.
         | 
         | So at the origin of life, the required energy source was free
         | elemental hydrogen a.k.a. dihydrogen (or/and carbon monoxide).
         | 
         | Dihydrogen is also produced today in volcanic gases and in
         | hydrothermal vents and it was produced in greater quantities in
         | the past, when Earth had more hydrogen than today, because a
         | significant part of the hydrogen has been lost in space, as it
         | cannot be retained by the gravity of Earth when it is not
         | combined with heavier elements.
         | 
         | Both in volcanic gases and in hydrothermal vents the origin of
         | dihydrogen is in the reaction of volcanic rocks with water,
         | where the water oxidizes the reduced iron ions (FeII) that come
         | from the interior of the Earth into rust (FeIII).
         | 
         | Because volcanic gases are mainly released during violent
         | eruptions, the more peaceful hydrothermal vents, where gases
         | with high dihydrogen content are released slowly during long
         | times in stable conditions are a more likely place for the
         | origin of life.
         | 
         | Moreover, the hydrothermal vents also release alkaline ions
         | (because of the increase in positive electric charge of the
         | oxidized iron ions, which repels the alkaline ions), which
         | create a gradient of ions in their path towards sea water,
         | which is likely to have been an auxiliary source of energy also
         | since the origin of life. All the present life forms still use
         | ion gradients as intermediates in the energy-transforming
         | processes.
         | 
         | The source of energy is the most important factor for the
         | origin of life. There have been plenty of fantastic theories
         | about the origin of life, which have omitted to provide an
         | explanation for a continuous source of energy, without which no
         | form of life is possible, so there is no doubt that all those
         | theories were wrong.
         | 
         | Free dihydrogen is not produced only at the surface of the
         | crust, like in hydrothermal vents, but it is also produced at
         | great depths, wherever volcanic rocks are infiltrated with
         | water. The acetogenic bacteria and the methanogenic or
         | acetogenic archaea do not need any other source of energy, so
         | they can live there without problems.
         | 
         | While the acetogenic bacteria and the methanogenic or
         | acetogenic archaea need only dihydrogen, besides normal
         | constituents of the rocks, like water and carbon dioxide, so
         | they can live at any depth below the surface of the Earth where
         | the temperature is not too great for life, many of the so-
         | called anaerobic bacteria actually need substances, like
         | sulfate or nitrate or oxidized iron, that are products of
         | oxidation caused by the activity of the phototrophic algae and
         | plants, so even when those anaerobic bacteria live in caves or
         | on the deep sea bottom they are still dependent on Sun's light
         | and on the oxygenic phototrophic organisms. Therefore such
         | anaerobic bacteria are unlikely to live at great depths and
         | their metabolism is not relevant for the origin of life.
        
           | tim333 wrote:
           | I think one of the most interesting things to investigate on
           | Mars is if similar stuff happened there. They may quite
           | likely have life at the deep in rocks phase that hasn't
           | progressed to plants and animals.
           | 
           | Probably better investigated by robots than by Musk building
           | a Butlins there.
        
       | RachelF wrote:
       | The title of the article is incorrect, the worms live in the
       | crust, not "beneath the planetary crust" (in the magma).
       | 
       | The Economist magazine is not what it used to be, sadly.
        
         | fuzzfactor wrote:
         | Yeah, beneath the planetary crust is asking a lot.
         | 
         | Probably didn't want to settle for less but you take what you
         | can get . . .
        
         | davidw wrote:
         | I finally unsubscribed this summer.
        
           | sourcepluck wrote:
           | For me the last straw was a piece they did on Julian Assange
           | when he was still going through his kangaroo court debacle in
           | the UK, a pure hit job. It was gruesome stuff.
        
         | foobar1962 wrote:
         | This annoyed me as well.
        
         | hinkley wrote:
         | We've known about tube worms for an awfully long time. If we
         | found them in the mantle that actually would be worth a news
         | article. This is middle school biology. And has been for
         | decades.
        
           | blackhawkC17 wrote:
           | The Economist's specialty is business and finance, not
           | science. It's not out of the place for their journalists to
           | make such mistakes, the same way many science publications
           | make silly mistakes when talking about business matters.
        
             | hinkley wrote:
             | Technically the article does say the young gestate farther
             | into the vents, which is news. Not surprising news, but
             | still news.
             | 
             | "Under the seabed" would have been more accurate.
        
       | metalman wrote:
       | my personal take on evolution,is based on two fact like pieces of
       | information, first is that life can perhaps be seen as extreamly
       | complex assemblies of matter and energy and second that the
       | universe is a vast field of energy gradients with a general mish
       | mash of all of the possible elements of matter lodged in a
       | variety of disks,spheres,blobs,and ribbons, leaving much of it
       | open for life to work in some form which is just a re phaseing of
       | what many have suggested is the feeling of the inevitability of
       | life,which I might add,is miracle enough
        
         | foobar1962 wrote:
         | 1) take a breath 2) the universe is big, really big...
        
         | adolph wrote:
         | > life can perhaps be seen as extreamly complex assemblies
         | 
         | Sounds similar to Assembly Theory as promulgated by Cronin et
         | al
         | 
         | https://www.nature.com/articles/s41586-023-06600-9
        
         | steveoscaro wrote:
         | I've always had the vague feeling that life is like little
         | whirl pools in the river of energy flowing from low entropy to
         | high entropy. Water can flow uphill if you observe only
         | snippets of the journey.
        
           | 082349872349872 wrote:
           | anyone know the source of "life is fire, slowed down, with an
           | attitude"?
        
       | gorgoiler wrote:
       | Tjeerd van Andel -- one of the original _Alvin_ divers from
       | Scripps -- once told a group of us that their excitement at
       | finding giant mussels around these smokers was both scientific
       | and culinary. Large, rich and meaty, with a hint of Radon,
       | apparently, which meant they had to limit their intake.
       | 
       | It's a shame there weren't any deep sea potatoes to complete the
       | classic mosselen-friet / moules frites / mussel French fries
       | combo.
        
       | andrewflnr wrote:
       | The current HN title is, ah, underselling the find here. We
       | already knew tubeworms live "around" vents.
        
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