[HN Gopher] Deep beneath earth's surface, clues to life's origins
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       Deep beneath earth's surface, clues to life's origins
        
       Author : rbanffy
       Score  : 63 points
       Date   : 2024-01-07 14:47 UTC (8 hours ago)
        
 (HTM) web link (www.quantamagazine.org)
 (TXT) w3m dump (www.quantamagazine.org)
        
       | olddustytrail wrote:
       | This is something I wondered about the idea of life beginning in
       | the oceans and spreading to dry land.
       | 
       | If approximately 70 percent of the total number of microbes on
       | the planet live underground today (number I googled) wouldn't it
       | make more sense that life began underground and slowly spread to
       | the surface? Is this a theory anywhere?
        
         | JoeAltmaier wrote:
         | I favor the idea that a planet with a moon in a slightly
         | eccentric orbit (earth) you have oceans washing minerals over
         | every grain of sand on every beach, depositing then washing
         | away different concentrations of everything, wetting and drying
         | and applying sunlight and shade, warming and cooling. A billion
         | billion petri dishes over a billion years. Eventually bingo!
         | organic molecules then life.
        
           | ninkendo wrote:
           | I don't even think it's the eccentricity that does it, all it
           | matters is that the earth isn't tidally locked with the moon,
           | that's what gives you the tides: Earth is rotating faster
           | than the moon orbits and so different parts of the earth face
           | the moon within a day. It also helps that the moon is a
           | significant fraction of the mass of the earth, which means
           | its gravitational influence is significant to the oceans.
        
             | adolph wrote:
             | Eccentricities also contribute to long duration cycles of
             | tides. Instead of all the Petri dishes following a single
             | cycle, there is also another dimension of longer cycle
             | dishes.
        
         | orangepinyata wrote:
         | It's an interesting suggestion but I think given what we know
         | of life it's unlikely. I guess (obviously this is all
         | speculation - none of us were there!) the origin of life can
         | sort of be thought of as going from chemistry/geochemistry to
         | biochemistry. And purely from a rate of reactions perspective,
         | in a nice solvent like water that's likely to be more conducive
         | to the origin of life than deep underground (in solids/highly
         | viscous liquid at best).
         | 
         | Then there's also flux - do you have temporal/spatial variation
         | in your various chemical constituents that might give rise to
         | potential gradients (as we find in life - chemiosmosis in
         | mitochondria for an obvious example). These are very prevalent
         | at the sort of Lost City hydrothermal vents, where you have a
         | very nice solvent coming into contact with a large mineral
         | flux, with large energetic and chemical gradients. Again, less
         | likely to be found underground.
         | 
         | If you're interested in this kind of thing I'd heartily
         | recommend Nick Lane's book 'The Vital Question' or
         | 'Transformer'. He tends to frame the issue not so much as just
         | having the chemicals available (we find these on
         | asteroids/meteorites!) but in having the energetic flux to get
         | life started. Sort of akin I guess to how the components of a
         | lightbulb don't do anything until you add an electron flux.
        
           | freedomben wrote:
           | I bought "The Vital Question" last year, but haven't read it
           | yet. I started "Oxygen" by the same author though and found
           | it a real slog. It felt like it occupied a hard position,
           | assuming a fair amount of relevant scientific background in
           | the reader, and wasn't really a book meant for general
           | consumption. It's definitely possible I just wasn't in the
           | right mental state for it.
           | 
           | Did you find his books to be like that? Have you read Oxygen
           | by chance and good compare/contrast them?
        
             | orangepinyata wrote:
             | I'll admit I haven't read them that recently but from what
             | I recall the Vital Question is slightly more readable than
             | Oxygen. That said, all of his books are very 'thorough' in
             | the sense that he's definitely posing them as trying to
             | make an argument as opposed to just educational, which does
             | definitely make them less readable than they could be. Less
             | bedtime reading and more something to actually make time
             | for I guess?
             | 
             | I have seen him give talks in person before and they've
             | been a lot clearer - maybe there's some on youtube? He's
             | been on a few of the 'In Our Time' podcast episodes, so
             | they might be interesting too?
        
           | syllablehq wrote:
           | I posted another comment above about recent discoveries that
           | the Earth has enormous quantities of hydrogen deep
           | underground which is constantly bubbling to the surface - and
           | in fact, flowing all the way up to the upper atmosphere and
           | even escaping into space (!). So this would indeed seem to
           | provide a flux even deep underground. Understanding this
           | geologic hydrogen cycle is a fascinating new field.
        
         | freedomben wrote:
         | Yes this is definitely a theory already. The volcanic vents
         | under the ocean particularly seem promising. I'm nowhere near
         | qualified to even try to explain it without making certain
         | errors, so I don't want to even try, rather I'll recommend
         | someone who _is_ qualified (and good at teaching).
         | 
         | If you're interested in this stuff, I can highly recommend
         | Robert M. Hazen. He has an amazing Great Course called "The
         | Origin and Evolution of Earth: From the Big Bang to the Future
         | of Human Existence" that covers stuff in depth. There's a
         | shorter one called "Origins of Life" as well but I haven't
         | listened to that. My impression is that it's an abridged
         | version of the former.
         | 
         | Hazen also wrote a book called "The Story of Earth: The First
         | 4.5 Billion Years, from Stardust to Living Planet" which covers
         | the same material as the course (but in book form, obviously)
         | and is really good. I liked the lecture-style of the course
         | better personally, but they're both excellent resources if
         | you're interested in this stuff.
         | 
         | My only regret is that they're about 10 years old at this
         | point. If anyone knows what has changed in the last decade in
         | the field, I'd be fascinated to know.
        
           | tectonic wrote:
           | Came here to post the same thing, The Story of Earth is
           | excellent!
        
           | olddustytrail wrote:
           | Oh thanks! I have an Audible subscription so just spent a
           | credit on the Hazen great course.
           | 
           | Mind you, I just started the Bach and the High Baroque so it
           | might be a fair way into 2024 before I get to it. Maybe I can
           | interleave them...
        
             | freedomben wrote:
             | Nice! I wouldn't worry too much. Once you start Hazen's
             | course it will be impossible for you to stop :-D
             | 
             | That Bach course does seem quite interesting though, I'll
             | check it out!
        
           | queuebert wrote:
           | If you're interested in the origins and future of humanity,
           | I'd recommend Isaac Arthur's YouTube channel as a
           | complementary source as well.
           | 
           | https://www.youtube.com/@isaacarthurSFIA
        
             | olddustytrail wrote:
             | Thanks, I'll check that out also!
        
             | edgyquant wrote:
             | Isaac Arthur is an engineer, so not exactly an expert on
             | biology or anthropology. He does to a lot of futurology,
             | but thats unrelated to the origins of life on earth and any
             | speculation he does there is just that.
        
         | comboy wrote:
         | All life is made out of cells. All cells are filled with water.
         | Phospholipids which make cells membrane arrange themselves into
         | membrane because one part of them is hydrophobic and the other
         | hydrophilic. Although I guess some water is present underground
         | too.
        
           | olddustytrail wrote:
           | Well that relates to something I heard a few years ago about
           | there being more water in the earth's crust and mantle than
           | in the oceans. Isn't there some SciFi book along those lines
           | with the water rising up? Not something I've actually read,
           | but I'm pretty sure I heard about it.
        
             | queuebert wrote:
             | The water exists in the rock mostly like water exists in
             | the silica packets in everything you buy these days --
             | chemically bound in hydrated forms of crystals. That means
             | it must be taken into account in any chemistry models, but
             | not that there's a giant reservoir underground waiting to
             | burst out in a flood.
        
         | adrian_b wrote:
         | The essential ingredient for the origin of life is a source of
         | energy.
         | 
         | The use of solar energy did not become possible until at least
         | a few hundred million years after the appearance of life,
         | perhaps only after more than a billion years, because the
         | trans-membrane ionic pumps powered by solar light are extremely
         | complex structures that could not have been created out of non-
         | living substances.
         | 
         | The only known energy source that can cause the appearance of
         | life is the reaction between dihydrogen (elemental hydrogen)
         | and carbon monoxide or carbon dioxide. Carbon dioxide exists in
         | huge quantities everywhere on any planet without living beings
         | (Earth is an anomaly, because most of the original carbon
         | dioxide has been reduced and incorporated in living matter), so
         | what is necessary for the appearance of life is a source of
         | free dihydrogen. A gradient of ionic concentration in water is
         | also helpful.
         | 
         | Such conditions are present where either volcanic gases are
         | released in water or in the so called alkaline vents, where
         | rocks rich in iron are oxidized by water, releasing the
         | hydrogen from water as dihydrogen (this is the
         | "serpentinization" mentioned in the parent article).
         | 
         | Both kinds of conditions are more typical for certain places on
         | the bottom of the ocean, but they can be also encountered under
         | ground, with the condition that there must be water infiltrated
         | through the rocks, without water there is no source of free
         | dihydrogen.
        
           | lumb63 wrote:
           | > The only known energy source that can cause the appearance
           | of life is the reaction between dihydrogen (elemental
           | hydrogen) and carbon monoxide or carbon dioxide.
           | 
           | What do you mean by "the appearance of life"? These elements
           | couldn't make even a single amino acid, so I'm not sure I
           | follow how these molecules could lead to the appearance of
           | life.
        
       | syllablehq wrote:
       | Very cool research. On the topic of hydrogen deep underground:
       | I'm not an expert, just a fascinated amateur, but I've been
       | fascinated by the recent discovery that there is enormous amounts
       | of hydrogen below the earth. In fact, this article mentions
       | hydrogen forming by serpentinization, and says that the
       | researchers were shocked to find so much hydrogen. Recent
       | research indicates that hydrogen may exist deep in the earth from
       | processes other than serpentinization as well. There are now a
       | handful of companies working to extract this natural hydrogen to
       | use as a source of green energy. Exciting stuff.
       | 
       | This is an excellent research overview on the topic of "natural"
       | geologic hydrogen
       | https://www.sciencedirect.com/science/article/abs/pii/S00128...
       | 
       | I've also compiled some of my own notes on that paper here which
       | provide some summaries on the multiple fascinating sub-topics.
       | (E.G. hydrogen may be a driver of earthquakes! And we may be able
       | to use hydrogen samples to predict earthquakes! Some predict that
       | there may be even more biomass under the earth driven by sources
       | like hydrogen and methane than there is above ground!)
       | https://docs.google.com/document/d/1pnW4HRq6E2up0DhIoxjCyGS6...
        
         | pixl97 wrote:
         | If the Earth didn't have a huge internal geological reserve of
         | hydrogen (and other gaseous chemicals) we'd effectively be a
         | dead planet. It's easy to lose hydrogen to space, which is one
         | reason we don't see much of it in the atmosphere. When we start
         | talking about geologic timescales it would lead to the
         | disassociation and lose of almost all atmospheric gasses.
         | Luckily we have the tectonic plate cycle that puts new gasses
         | in the atmosphere and kicks our eventual extinction down the
         | road a bit farther. This also leads to earth shrinking over
         | these very long time periods.
        
         | jl6 wrote:
         | Let's hope we don't find and extract so much subterranean
         | hydrogen that we burn it into water and cause sea level rise.
        
           | coder543 wrote:
           | Don't forget that oxygen is useful for breathing too. Semi-
           | important, I hear.
           | 
           | ChatGPT estimates that if we converted all of earth's
           | atmospheric oxygen into water (via burning with hydrogen),
           | ocean levels would rise about 3.7 meters: https://chat.openai
           | .com/share/c9c8ce51-6070-49b6-a092-86e4a4...
           | 
           | I don't have time to check this math, so take it with a
           | substantial grain of salt.
        
           | random_ind_dude wrote:
           | It will probably increase the concentration of water vapor in
           | the atmosphere, which will lead to further warming as water
           | vapor absorbs the heat radiated by Earth.
        
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