loci.formats
Class PerkinElmerReader

java.lang.Object
  loci.formats.FormatHandler
      loci.formats.FormatReader
          loci.formats.PerkinElmerReader

public class PerkinElmerReader

extends FormatReader

PerkinElmerReader is the file format reader for PerkinElmer files.

Field Summary

protected String[]	files Tiff files to open.
protected int	numImages Number of images.
protected TiffReader	tiff Helper reader.

Fields inherited from class loci.formats.FormatReader

DEBUG, DEBUG_LEVEL, metadata, ome

Fields inherited from class loci.formats.FormatHandler

chooser, currentId, filters, format, suffixes

Constructor Summary

PerkinElmerReader()
Constructs a new PerkinElmer reader.

Method Summary

void	close() Closes any open files.
int	getImageCount(String id) Determines the number of images in the given PerkinElmer file.
protected void	initFile(String id) Initializes the given PerkinElmer file.
boolean	isThisType(byte[] block) Checks if the given block is a valid header for a PerkinElmer file.
static void	main(String[] args)
BufferedImage	open(String id, int no) Obtains the specified image from the given PerkinElmer file.

Methods inherited from class loci.formats.FormatReader

createFilters, getMetadata, getMetadataValue, getOMENode, open, testRead

Methods inherited from class loci.formats.FormatHandler

getFileChooser, getFileFilters, getFormat, getSuffixes, isThisType

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

numImages

protected int numImages

Number of images.

tiff

protected TiffReader tiff

Helper reader.

files

protected String[] files

Tiff files to open.

Constructor Detail

PerkinElmerReader

public PerkinElmerReader()

Constructs a new PerkinElmer reader.

Method Detail

isThisType

public boolean isThisType(byte[] block)

Checks if the given block is a valid header for a PerkinElmer file.

Specified by:

isThisType in class FormatReader

getImageCount

public int getImageCount(String id)
                  throws FormatException,
                         IOException

Determines the number of images in the given PerkinElmer file.

Specified by:

getImageCount in class FormatReader

Throws:

FormatException

IOException

open

public BufferedImage open(String id,
                          int no)
                   throws FormatException,
                          IOException

Obtains the specified image from the given PerkinElmer file.

Specified by:

open in class FormatReader

Throws:

FormatException

IOException

close

public void close()
           throws FormatException,
                  IOException

Closes any open files.

Specified by:

close in class FormatReader

Throws:

FormatException

IOException

initFile

protected void initFile(String id)
                 throws FormatException,
                        IOException

Initializes the given PerkinElmer file.

Overrides:

initFile in class FormatReader

Throws:

FormatException

IOException

main

public static void main(String[] args)
                 throws FormatException,
                        IOException

Throws:

FormatException

IOException