## Package loci.formats

Interface Summary
BZip2Constants: Base class for both the compress and decompress classes.

Class Summary
AndorReader: Reader is the file format reader for Andor Bio-imaging Division (ABD) TIFF files.
AVIReader: AVIReader is the file format reader for uncompressed AVI files.
AVIWriter: AVIWriter is the file format writer for AVI files.
BaseTiffReader: BaseTiffReader is the superclass for file format readers compatible with or derived from the TIFF 6.0 file format.
BioRadReader: BioRadReader is the file format reader for Bio-Rad PIC files.
BitBuffer: A class for reading arbitrary numbers of bits from a byte array.
BitWriter: A class for writing arbitrary numbers of bits to a byte array.
BMPReader: BMPReader is the file format reader for Microsoft Bitmap (BMP) files.
ByteVector: A growable array of bytes.
CBZip2InputStream: An input stream that decompresses from the BZip2 format (without the file header chars) to be read as any other stream.
ComboFileFilter: A file filter that recognizes files from a union of other filters.
Compression: A utility class for handling various compression types.
CRC: A simple class the hold and calculate the CRC for sanity checking of the data.
DataTools: A utility class with convenience methods for reading, writing and decoding words.
DeltavisionReader: DeltavisionReader is the file format reader for Deltavision files.
ExtensionFileFilter: A file filter based on file extensions, for use with a JFileChooser.
FluoviewReader: FluoviewReader is the file format reader for Olympus Fluoview TIFF files.
FormatFileFilter: A file filter for a biological file format, for use with a JFileChooser.
FormatHandler: Abstract superclass of all biological file format readers and writers.
FormatReader: Abstract superclass of all biological file format readers.
FormatWriter: Abstract superclass of all biological file format writers.
GatanReader: GatanReader is the file format reader for Gatan files.
GIFReader: GIFReader is the file format reader for Graphics Interchange Format (GIF) images.
ICSReader: ICSReader is the file format reader for ICS (Image Cytometry Standard) files.
ImageIOReader: ImageIOReader is the superclass for file format readers that use the javax.imageio package.
ImageJReader: ImageJReader is the file format reader for the image formats supported by Wayne Rasband's excellent ImageJ program: DICOM, FITS, PGM, JPEG, GIF, LUT, BMP, TIFF, ZIP-compressed TIFF and ROI.
ImageReader: ImageReader is master file format reader for all supported formats.
ImageTester: A class for testing the ImageTools.makeImage methods.
ImageTools: A utility class with convenience methods for manipulating images.
ImageViewer: ImageViewer is a simple viewer/converter for the LOCI Bio-Formats image formats.
ImageWriter: ImageWriter is master file format writer for all supported formats.
IPLabReader: IPLabReader is the file format reader for IPLab (.IPL) files.
IPWReader: IPWReader is the file format reader for Image-Pro Workspace (IPW) files.
JPEGReader: JPEGReader is the file format reader for JPEG images.
JPEGWriter: JPEGWriter is the file format writer for JPEG files.
LegacyPictReader: LegacyPictReader is the old file format reader for Apple PICT files.
LegacyQTReader: LegacyQTReader is the old file format reader for QuickTime movie files.
LegacyZVIReader: LegacyZVIReader is the legacy file format reader for Zeiss ZVI files.
LeicaReader: LeicaReader is the file format reader for Leica files.
LZWTreeNode: An LZW-compression helper class for building a symbol table in tree format.
MetamorphReader: Reader is the file format reader for Metamorph STK files.
OMETools: A utility class for constructing and manipulating OME-XML DOMs.
OMEXMLReader: OMEXMLReader is the file format reader for OME-XML files.
OpenlabReader: OpenlabReader is the file format reader for Openlab LIFF files.
PerkinElmerReader: PerkinElmerReader is the file format reader for PerkinElmer files.
PictReader: PictReader is the file format reader for Apple PICT files.
PNGReader: PNGReader is the file format reader for Portable Network Graphics (PNG) images.
QTReader: QTReader is the file format reader for QuickTime movie files.
QTWriter: QTWriter is the file format writer for uncompressed QuickTime movie files.
RandomAccessArray: An extension of RandomAccessFile providing random access into an array of bytes directly from memory.
ReflectedUniverse: A general-purpose reflection wrapper class.
SEQReader: SEQReader is the file format reader for Image-Pro Sequence files.
TiffRational: A rational number (numerator over denominator).
TiffReader: TiffReader is the file format reader for TIFF files.
TiffTools: A utility class for manipulating TIFF files.
TiffWriter: TiffWriter is the file format writer for TIFF files.
ZeissLSMReader: ZeissLSMReader is the file format reader for Zeiss LSM files.
ZeissZVIReader: ZeissZVIReader is the file format reader for Zeiss ZVI files.

Exception Summary
FormatException: FormatException is the exception thrown when something goes wrong performing a file format operation.
ReflectException: ReflectException is the exception thrown when something goes wrong performing a reflected operation with ReflectedUniverse.