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Date: Sun, 16 Jun 2002 13:16:57 +1000 (EST)
From: Tony Maher <tonym@biolateral.com.au>
Reply-To: Tony Maher <tonym@biolateral.com.au>
To: FreeBSD-gnats-submit@freebsd.org
Cc:
Subject: Maintainer update: biology/ncbi-toolkit
X-Send-Pr-Version: 3.113
X-GNATS-Notify:

>Number:         39357
>Category:       ports
>Synopsis:       Maintainer update: biology/ncbi-toolkit
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports
>State:          closed
>Quarter:        
>Keywords:       
>Date-Required:  
>Class:          maintainer-update
>Submitter-Id:   current-users
>Arrival-Date:   Sat Jun 15 20:20:01 PDT 2002
>Closed-Date:    Fri Sep 20 23:59:45 PDT 2002
>Last-Modified:  Fri Sep 20 23:59:45 PDT 2002
>Originator:     Tony Maher
>Release:        FreeBSD 4.6-RC i386
>Organization:
BioLateral
>Environment:
System: FreeBSD dt.home 4.6-RC FreeBSD 4.6-RC #5: Sat Jun 1 13:32:56 EST 2002 root@dt.home:/usr/obj/usr/src/sys/DT i386


>Description:
	Update ncbi-toolkit to version 2002.04.26.
	Use the new ${REINPLACE_CMD} while I am here.
	Update patch-aa
		a) to remove a file that is not actually an executable
		b) not list all the libraries explicitly, just copy
			all library files we can find.  This simplifies
			future updates and we already know (or will update)
			what they are via pkg-plist.
	Update emails in pkg-descr.
	Fix typo and unnecessary blank lines in pkg-message.

>How-To-Repeat:

>Fix:


diff -u ncbi-toolkit.orig/Makefile ncbi-toolkit/Makefile
--- ncbi-toolkit.orig/Makefile	Sat Jun  8 10:40:10 2002
+++ ncbi-toolkit/Makefile	Sun Jun 16 11:56:45 2002
@@ -6,7 +6,7 @@
 #
 
 PORTNAME=	ncbi-toolkit
-PORTVERSION=	2001.12.20
+PORTVERSION=	2002.04.26
 CATEGORIES=	biology
 MASTER_SITES=	ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/${PORTVERSION:S/.//g}/
 DISTNAME=	ncbi
@@ -36,7 +36,7 @@
 pre-configure:
 	@${CP} ${FILESDIR}/${DUMMYMAKE} ${WRKSRC}
 	@${CP} ${FILESDIR}/freebsd.ncbi.mk ${PLATFORMDIR}
-	@${PERL} -pi.orig -e 's#NetBSD#FreeBSD#;'  -e 's#netbsd#freebsd#' ${BUILDSCRIPT}
+	@${REINPLACE_CMD} -e 's#NetBSD#FreeBSD#;'  -e 's#netbsd#freebsd#' ${BUILDSCRIPT}
 
 post-install:
 	@${MKDIR} ${DATADIR}
diff -u ncbi-toolkit.orig/distinfo ncbi-toolkit/distinfo
--- ncbi-toolkit.orig/distinfo	Fri Feb 22 18:57:05 2002
+++ ncbi-toolkit/distinfo	Sat Jun 15 09:57:51 2002
@@ -1 +1 @@
-MD5 (ncbi.tar.gz) = 8038afb3f5502b3b8ade4f221eebe46e
+MD5 (ncbi.tar.gz) = 7278c10b227b0298f00a5ed5dde58bc4
Common subdirectories: ncbi-toolkit.orig/files and ncbi-toolkit/files
diff -u ncbi-toolkit.orig/pkg-descr ncbi-toolkit/pkg-descr
--- ncbi-toolkit.orig/pkg-descr	Thu Jun 21 00:25:54 2001
+++ ncbi-toolkit/pkg-descr	Sat Jun 15 09:57:51 2002
@@ -16,5 +16,4 @@
   have found it a useful and stable basis for a number of tools and
   applications.
 
--- Tony Maher <tony.maher@ebioinformatics.com>
-   FreeBSD bio-porters <bio@freebsd.net>
+-- Tony Maher <tonym@biolateral.com.au>
diff -u ncbi-toolkit.orig/pkg-message ncbi-toolkit/pkg-message
--- ncbi-toolkit.orig/pkg-message	Fri Feb 22 18:57:05 2002
+++ ncbi-toolkit/pkg-message	Sat Jun 15 09:57:51 2002
@@ -1,8 +1,6 @@
-
-The data files are installed in "%%PREFIX%%/share/ncbi-tookit".
+The data files are installed in "%%PREFIX%%/share/ncbi-toolkit".
 To use them you need to create a .ncbirc file in your home directory
 with the following lines:
 
 [NCBI]
 Data=%%PREFIX%%/share/ncbi-toolkit/
-
diff -u ncbi-toolkit.orig/pkg-plist ncbi-toolkit/pkg-plist
--- ncbi-toolkit.orig/pkg-plist	Fri Feb 22 18:57:05 2002
+++ ncbi-toolkit/pkg-plist	Sat Jun 15 09:57:51 2002
@@ -37,12 +37,12 @@
 %%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn19.gif
 %%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn20.gif
 %%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn21.gif
+%%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn22.gif
 %%PORTDOCS%%share/doc/ncbi-toolkit/ncbixml.txt
 %%PORTDOCS%%share/doc/ncbi-toolkit/sdk.doc
 %%PORTDOCS%%share/doc/ncbi-toolkit/sequin.htm
 bin/Nentrez
 bin/Psequin
-bin/asn2fast
 bin/asn2ff
 bin/asn2xml
 bin/asndhuff
@@ -87,6 +87,7 @@
 bin/testval
 bin/udv
 bin/vecscreen
+lib/ncbi/libddvlib.a
 lib/ncbi/libncbi.a
 lib/ncbi/libncbiCacc.a
 lib/ncbi/libncbiNacc.a
@@ -102,7 +103,6 @@
 lib/ncbi/libncbitxc2.a
 lib/ncbi/libnetblast.a
 lib/ncbi/libnetcli.a
-lib/ncbi/libnetcli_.a
 lib/ncbi/libnetentr.a
 lib/ncbi/libvibgif.a
 lib/ncbi/libvibnet.a
@@ -110,6 +110,7 @@
 include/ncbi/connect/ncbi_ansi_ext.h
 include/ncbi/connect/ncbi_buffer.h
 include/ncbi/connect/ncbi_comm.h
+include/ncbi/connect/ncbi_config.h
 include/ncbi/connect/ncbi_connection.h
 include/ncbi/connect/ncbi_connector.h
 include/ncbi/connect/ncbi_connutil.h
@@ -117,6 +118,7 @@
 include/ncbi/connect/ncbi_file_connector.h
 include/ncbi/connect/ncbi_heapmgr.h
 include/ncbi/connect/ncbi_http_connector.h
+include/ncbi/connect/ncbi_memory_connector.h
 include/ncbi/connect/ncbi_priv.h
 include/ncbi/connect/ncbi_sendmail.h
 include/ncbi/connect/ncbi_server_info.h

>Release-Note:
>Audit-Trail:

From: Patrick Li <pat@FreeBSD.org>
To: freebsd-gnats-submit@FreeBSD.org, tonym@biolateral.com.au
Cc:  
Subject: Re: ports/39357: Maintainer update: biology/ncbi-toolkit
Date: Sun, 16 Jun 2002 16:52:10 -0700

 I notice you mentioned an update to patch-aa which i dont see in your
 submitted patch.
 
 -pat

From: Tony Maher <tonym@biolateral.com.au>
To: freebsd-gnats-submit@FreeBSD.ORG, pat@FreeBSD.ORG
Cc:  
Subject: Re: ports/39357: Maintainer update: biology/ncbi-toolkit
Date: Mon, 17 Jun 2002 10:13:47 +1000 (EST)

 Sorry, updated a single file and regenerated the patch just before sending
 but used -u instread of -ruN.
 
 Here is patch generated correctly this time (I hope!)
 
 thanks
 --
 tonym
 
 
 
 diff -ruN seaview.orig/Makefile seaview/Makefile
 --- seaview.orig/Makefile	Sat May 18 12:36:56 2002
 +++ seaview/Makefile	Mon Jun 17 10:05:18 2002
 @@ -2,34 +2,61 @@
  # Date created:         Dec 5 1997
  # Whom:                 frankch@waru.life.nthu.edu.tw
  #
 -# $FreeBSD: ports/biology/seaview/Makefile,v 1.18 2002/05/18 02:36:56 kris Exp $
 +# $FreeBSD: ports/biology/seaview/Makefile,v 1.17 2000/10/08 10:19:17 asami Exp $
  #
  
  PORTNAME=	seaview
 -PORTVERSION=	1.0
 +PORTVERSION=	2002.04.09
  CATEGORIES=	biology
  MASTER_SITES=	ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
  DISTNAME=	${PORTNAME}
  EXTRACT_SUFX=	.tar
  
 -MAINTAINER=	frankch@waru.life.nthu.edu.tw
 +MAINTAINER=	tonym@biolateral.com.au
  
 -BROKEN=		"Checksum is incorrect"
 -
 -LIB_DEPENDS=	xforms.0:${PORTSDIR}/x11-toolkits/xforms
 +LIB_DEPENDS=	fltk.1:${PORTSDIR}/x11-toolkits/fltk
  
  USE_X_PREFIX=	YES
 +USE_MESA=	YES
  NO_WRKSUBDIR=	YES
 -EXTRACT_CMD=		${TAR}
 +MAKEFILE=	makefile
 +ALL_TARGET=	seaview
 +EXTRACT_CMD=	${TAR}
  EXTRACT_BEFORE_ARGS=	-xf
  EXTRACT_AFTER_ARGS=	# empty
 +DOCDIR=		${PREFIX}/share/doc/${PORTNAME}
 +
 +pre-extract:
 +.if !defined(BATCH) && !defined(PACKAGE_BUILDING) && !defined(HAVE_UTAH)
 +	@(/usr/bin/dialog --textbox ${MASTERDIR}/pkg-warning 8 70 || ${TRUE})
 +.endif
 +
 +pre-patch:
 +.if defined(HAVE_UTAH)
 +P_CFLAGS=	${PTHREAD_CFLAGS}
 +P_LIBS=		${PTHREAD_LIBS}
 +.endif
 +
 +post-patch:
 +	@ ${REINPLACE_CMD} -e 's|../fltk|${X11BASE}|;' \
 +			   -e "s|I(.*)$$|I\\1/include|;" \
 +			   -e 's|-lfltk|-lfltk -lGL -lXext|;' \
 +			   -e 's|^CFLAGS  =|CFLAGS += ${P_CFLAGS} |;' \
 +			   -e 's|-lm|-lm ${P_LIBS}|;' \
 +			   ${WRKSRC}/${MAKEFILE}
 +	@ ${REINPLACE_CMD} -e "s|tmpnam|mkstemp|;" \
 +			   -e "s|(<stdlib.h>)|\1\n#include <unistd.h>|;" \
 +			   ${WRKSRC}/align.cxx
  
  do-install:
  	@ ${INSTALL_PROGRAM} ${WRKSRC}/${DISTNAME} ${PREFIX}/bin
 -	@ (${MKDIR} ${PREFIX}/lib/X11/seaview)
 -	@ ${INSTALL_DATA} ${WRKSRC}/seaview.help ${PREFIX}/lib/X11/seaview
 +	@ ${INSTALL_SCRIPT}  ${WRKSRC}/seaview_align.sh ${PREFIX}/bin
 +.if !defined(NOPORTDOCS)
 +	@ ${MKDIR} ${DOCDIR}
 +	@ ${INSTALL_DATA} ${WRKSRC}/seaview.help ${DOCDIR}
 +.endif
  
  post-install:
 -	@ ${CAT} ${DESCR}
 +	@ ${SED} -e "s#%%PREFIX%%#${PREFIX}#" ${PKGMESSAGE}
  
  .include <bsd.port.mk>
 diff -ruN seaview.orig/distinfo seaview/distinfo
 --- seaview.orig/distinfo	Mon Apr 24 19:45:46 2000
 +++ seaview/distinfo	Sun Jun 16 16:12:24 2002
 @@ -1 +1 @@
 -MD5 (seaview.tar) = 2e0b15423aae80a91709b253fc7c5cab
 +MD5 (seaview.tar) = 28b96855e50986b7e6ff6a0249b062b7
 diff -ruN seaview.orig/files/patch-aa seaview/files/patch-aa
 --- seaview.orig/files/patch-aa	Tue Aug 31 13:57:56 1999
 +++ seaview/files/patch-aa	Thu Jan  1 10:00:00 1970
 @@ -1,20 +0,0 @@
 ---- Makefile.orig	Mon Aug 30 20:54:56 1999
 -+++ Makefile	Mon Aug 30 20:55:48 1999
 -@@ -0,0 +1,17 @@
 -+#matpt.h
 -+#seaview.h
 -+CC	?= gcc
 -+CFLAGS+= -I${X11BASE}/include
 -+LIBS	= -L${X11BASE}/lib -lxforms -lX11 -lm
 -+SRCS	= align.c comlines.c load_seq.c regions.c seaview.c use_mase_files.c xfmatpt.c
 -+OBJS	= align.o comlines.o load_seq.o regions.o seaview.o use_mase_files.o xfmatpt.o
 -+
 -+all: seaview
 -+
 -+seaview: $(OBJS)
 -+	$(CC) -o seaview $(OBJS) $(LIBS)
 -+
 -+c.o.: $(SRCS)
 -+	$(CC) $(CFLAGS) -c $(SRCS)
 -+
 -+
 diff -ruN seaview.orig/pkg-descr seaview/pkg-descr
 --- seaview.orig/pkg-descr	Mon May  3 07:37:59 1999
 +++ seaview/pkg-descr	Sun Jun 16 18:27:38 2002
 @@ -2,14 +2,6 @@
  You can align DNA sequences from several organisms, and find out their
  relative postions in phylogenic tree.
  
 -File test.mase can be used as an example file.
 -Open the on-line help window through button 'Help' to learn seaview usage.
 +An example file test.mase can be obtained from the ftp site.
  
 -WWW: http://acnuc.univ-lyon1.fr/phylogeny/seaview.html
 -
 -*****************************************************************************
 -*   The help file (seaview.help) is located in /usr/X11R6/lib/X11/seaview/ .
 -*   Add an entry in your Xresources or Xdefaults file with:
 -*
 -*   seaview*helpfile:	/usr/X11R6/lib/X11/seaview/seaview.help
 -*****************************************************************************
 +WWW: ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
 diff -ruN seaview.orig/pkg-message seaview/pkg-message
 --- seaview.orig/pkg-message	Thu Jan  1 10:00:00 1970
 +++ seaview/pkg-message	Sun Jun 16 18:31:49 2002
 @@ -0,0 +1,6 @@
 +*****************************************************************************
 +* The help file (seaview.help) is located in %%PREFIX%%/share/doc/seaview/  *
 +* Add an entry in your Xresources or Xdefaults file with:                   *
 +*                                                                           *
 +* seaview*helpfile:   %%PREFIX%%/share/doc/seaview/seaview.help             *
 +*****************************************************************************
 diff -ruN seaview.orig/pkg-plist seaview/pkg-plist
 --- seaview.orig/pkg-plist	Mon Dec 22 09:04:39 1997
 +++ seaview/pkg-plist	Sun Jun 16 18:26:13 2002
 @@ -1,3 +1,4 @@
  bin/seaview
 -lib/X11/seaview/seaview.help
 -@dirrm lib/X11/seaview
 +bin/seaview_align.sh
 +%%PORTDOCS%%share/doc/seaview/seaview.help
 +%%PORTDOCS%%@dirrm share/doc/seaview/
 diff -ruN seaview.orig/pkg-warning seaview/pkg-warning
 --- seaview.orig/pkg-warning	Thu Jan  1 10:00:00 1970
 +++ seaview/pkg-warning	Mon Jun 17 08:53:42 2002
 @@ -0,0 +1,3 @@
 +If you are using XFree86 version 3 with utah-glx hit Ctrl-C now
 +and use 'make -DHAVE_UTAH'
 +Otherwise hit OK and continue.

From: Patrick Li <pat@FreeBSD.ORG>
To: Tony Maher <tonym@biolateral.com.au>
Cc: freebsd-gnats-submit@FreeBSD.ORG
Subject: Re:  ports/39357: Maintainer update: biology/ncbi-toolkit
Date: Sun, 16 Jun 2002 17:30:21 -0700

 On Mon, Jun 17, 2002 at 10:13:47AM +1000, Tony Maher wrote:
 > Sorry, updated a single file and regenerated the patch just before sending
 > but used -u instread of -ruN.
 > 
 > Here is patch generated correctly this time (I hope!)
 
 seaview? i believe you sent the wrong patch.

From: Tony Maher <tonym@biolateral.com.au>
To: pat@FreeBSD.ORG
Cc: freebsd-gnats-submit@FreeBSD.ORG
Subject: Re:  ports/39357: Maintainer update: biology/ncbi-toolkit
Date: Mon, 17 Jun 2002 10:54:24 +1000 (EST)

 Pat,
 
 ok here it is patch created with -ruN
 sorry for confusion
 
 thanks
 --
 tonym
 
 
 diff -ruN ncbi-toolkit.orig/Makefile ncbi-toolkit/Makefile
 --- ncbi-toolkit.orig/Makefile	Sat Jun  8 10:40:10 2002
 +++ ncbi-toolkit/Makefile	Sun Jun 16 11:56:45 2002
 @@ -6,7 +6,7 @@
  #
  
  PORTNAME=	ncbi-toolkit
 -PORTVERSION=	2001.12.20
 +PORTVERSION=	2002.04.26
  CATEGORIES=	biology
  MASTER_SITES=	ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/${PORTVERSION:S/.//g}/
  DISTNAME=	ncbi
 @@ -36,7 +36,7 @@
  pre-configure:
  	@${CP} ${FILESDIR}/${DUMMYMAKE} ${WRKSRC}
  	@${CP} ${FILESDIR}/freebsd.ncbi.mk ${PLATFORMDIR}
 -	@${PERL} -pi.orig -e 's#NetBSD#FreeBSD#;'  -e 's#netbsd#freebsd#' ${BUILDSCRIPT}
 +	@${REINPLACE_CMD} -e 's#NetBSD#FreeBSD#;'  -e 's#netbsd#freebsd#' ${BUILDSCRIPT}
  
  post-install:
  	@${MKDIR} ${DATADIR}
 diff -ruN ncbi-toolkit.orig/distinfo ncbi-toolkit/distinfo
 --- ncbi-toolkit.orig/distinfo	Fri Feb 22 18:57:05 2002
 +++ ncbi-toolkit/distinfo	Sat Jun 15 09:57:51 2002
 @@ -1 +1 @@
 -MD5 (ncbi.tar.gz) = 8038afb3f5502b3b8ade4f221eebe46e
 +MD5 (ncbi.tar.gz) = 7278c10b227b0298f00a5ed5dde58bc4
 diff -ruN ncbi-toolkit.orig/files/patch-aa ncbi-toolkit/files/patch-aa
 --- ncbi-toolkit.orig/files/patch-aa	Fri Feb 22 18:57:07 2002
 +++ ncbi-toolkit/files/patch-aa	Sat Jun 15 09:57:51 2002
 @@ -1,12 +1,12 @@
 ---- make/makeall.unx.orig	Thu Apr  5 09:24:30 2001
 -+++ make/makeall.unx	Tue Sep 18 14:49:24 2001
 -@@ -851,3 +851,51 @@
 +--- make/makeall.unx.orig	Thu Mar 21 06:01:20 2002
 ++++ make/makeall.unx	Sat Jun  8 20:16:09 2002
 +@@ -859,3 +859,46 @@
   	#load $(LDFLAGS) getmuid.c medutil.c \
   	$(SRC11) $(SRC8) $(SRC7) $(SRC6) $(SRC5) $(SRC3) \
   	$(SRC2) $(SRC1) $(OTHERLIBS) -lsocket -lnsl
  +
  +EXE=	Nentrez Psequin \
 -+		asn2fast asn2ff asn2xml asndhuff asntool \
 ++		asn2ff asn2xml asndhuff asntool \
  +		bl2seq blast.REAL blastall blastcl3 blastclust blastpgp \
  +		cdscan checksub copymat \
  +		ddv dosimple \
 @@ -21,13 +21,6 @@
  +		udv vecscreen
  +
  +
 -+LIB=	libncbi.a		libncbicdr.a	libncbimla.a	libncbitxc2.a \
 -+		libnetentr.a	libncbiCacc.a	libncbicn3d.a	libncbimmdb.a \
 -+		libnetblast.a	libvibgif.a		libncbiNacc.a	libncbidesk.a \
 -+		libncbiobj.a	libnetcli.a		libvibnet.a		libncbiacc.a \
 -+		libncbiid1.a	libncbitool.a	libnetcli_.a	libvibrant.a
 -+
 -+
  +MKDIR=	/bin/mkdir -p
  +INSTALL_PROGRAM=	/usr/bin/install -c
  +
 @@ -37,7 +30,9 @@
  +
  +linstall: $(LIB)
  +	${MKDIR} ${PREFIX}/lib/ncbi
 -+	${INSTALL_PROGRAM} $? ${PREFIX}/lib/ncbi
 ++	for file in *.a; do \
 ++		${INSTALL_PROGRAM} $$file ${PREFIX}/lib/ncbi; \
 ++	done
  +
  +iinstall::
  +	${MKDIR} ${PREFIX}/include/ncbi/connect
 diff -ruN ncbi-toolkit.orig/pkg-descr ncbi-toolkit/pkg-descr
 --- ncbi-toolkit.orig/pkg-descr	Thu Jun 21 00:25:54 2001
 +++ ncbi-toolkit/pkg-descr	Sat Jun 15 09:57:51 2002
 @@ -16,5 +16,4 @@
    have found it a useful and stable basis for a number of tools and
    applications.
  
 --- Tony Maher <tony.maher@ebioinformatics.com>
 -   FreeBSD bio-porters <bio@freebsd.net>
 +-- Tony Maher <tonym@biolateral.com.au>
 diff -ruN ncbi-toolkit.orig/pkg-message ncbi-toolkit/pkg-message
 --- ncbi-toolkit.orig/pkg-message	Fri Feb 22 18:57:05 2002
 +++ ncbi-toolkit/pkg-message	Sat Jun 15 09:57:51 2002
 @@ -1,8 +1,6 @@
 -
 -The data files are installed in "%%PREFIX%%/share/ncbi-tookit".
 +The data files are installed in "%%PREFIX%%/share/ncbi-toolkit".
  To use them you need to create a .ncbirc file in your home directory
  with the following lines:
  
  [NCBI]
  Data=%%PREFIX%%/share/ncbi-toolkit/
 -
 diff -ruN ncbi-toolkit.orig/pkg-plist ncbi-toolkit/pkg-plist
 --- ncbi-toolkit.orig/pkg-plist	Fri Feb 22 18:57:05 2002
 +++ ncbi-toolkit/pkg-plist	Sat Jun 15 09:57:51 2002
 @@ -37,12 +37,12 @@
  %%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn19.gif
  %%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn20.gif
  %%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn21.gif
 +%%PORTDOCS%%share/doc/ncbi-toolkit/images/seqn22.gif
  %%PORTDOCS%%share/doc/ncbi-toolkit/ncbixml.txt
  %%PORTDOCS%%share/doc/ncbi-toolkit/sdk.doc
  %%PORTDOCS%%share/doc/ncbi-toolkit/sequin.htm
  bin/Nentrez
  bin/Psequin
 -bin/asn2fast
  bin/asn2ff
  bin/asn2xml
  bin/asndhuff
 @@ -87,6 +87,7 @@
  bin/testval
  bin/udv
  bin/vecscreen
 +lib/ncbi/libddvlib.a
  lib/ncbi/libncbi.a
  lib/ncbi/libncbiCacc.a
  lib/ncbi/libncbiNacc.a
 @@ -102,7 +103,6 @@
  lib/ncbi/libncbitxc2.a
  lib/ncbi/libnetblast.a
  lib/ncbi/libnetcli.a
 -lib/ncbi/libnetcli_.a
  lib/ncbi/libnetentr.a
  lib/ncbi/libvibgif.a
  lib/ncbi/libvibnet.a
 @@ -110,6 +110,7 @@
  include/ncbi/connect/ncbi_ansi_ext.h
  include/ncbi/connect/ncbi_buffer.h
  include/ncbi/connect/ncbi_comm.h
 +include/ncbi/connect/ncbi_config.h
  include/ncbi/connect/ncbi_connection.h
  include/ncbi/connect/ncbi_connector.h
  include/ncbi/connect/ncbi_connutil.h
 @@ -117,6 +118,7 @@
  include/ncbi/connect/ncbi_file_connector.h
  include/ncbi/connect/ncbi_heapmgr.h
  include/ncbi/connect/ncbi_http_connector.h
 +include/ncbi/connect/ncbi_memory_connector.h
  include/ncbi/connect/ncbi_priv.h
  include/ncbi/connect/ncbi_sendmail.h
  include/ncbi/connect/ncbi_server_info.h
State-Changed-From-To: open->closed 
State-Changed-By: ijliao 
State-Changed-When: Fri Sep 20 23:59:30 PDT 2002 
State-Changed-Why:  
committed, thanks 

http://www.freebsd.org/cgi/query-pr.cgi?pr=39357 
>Unformatted:
