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Date: Tue, 2 Oct 2001 10:46:57 -0700 (PDT)
From: Adam Weinberger <monkey@crackula.com>
Reply-To: Adam Weinberger <monkey@crackula.com>
To: FreeBSD-gnats-submit@freebsd.org
Cc: monkey@crackula.com
Subject: biology/ncbi-toolkit will not compile (PATCH)
X-Send-Pr-Version: 3.113
X-GNATS-Notify:

>Number:         30990
>Category:       ports
>Synopsis:       biology/ncbi-toolkit will not compile (PATCH)
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    wjv
>State:          closed
>Quarter:        
>Keywords:       
>Date-Required:  
>Class:          sw-bug
>Submitter-Id:   current-users
>Arrival-Date:   Tue Oct 02 10:50:00 PDT 2001
>Closed-Date:    Wed Nov 7 23:19:14 PST 2001
>Last-Modified:  Wed Nov 07 23:19:57 PST 2001
>Originator:     Adam Weinberger
>Release:        FreeBSD 4.4-RELEASE i386
>Organization:
>Environment:
System: FreeBSD codon.pherin.com 4.4-RELEASE FreeBSD 4.4-RELEASE #1: Sat Sep 22 
01:13:58 PDT 2001 root@codon.pherin.com:/usr/src/sys/compile/AMINO i386


        initial 4.4-RELEASE install. has ports/x11-toolkits/openmotif

>Description:
	ncbi-toolkit wants to link against static Motif libraries, which are
	not installed by the motif port upon which it depends. i can't even
	get openmotif to install static libs at all. this simple patch links
>How-To-Repeat:
	build ports/biology/ncbi-toolkit
>Fix:

        the following patch should be applied in ports/biology/ncbi-toolkit/.
        it will modify the files/freebsd.ncbi.mk file.

        =============BEGIN patch-freebsd.ncbi.mk
        --- files/freebsd.ncbi.mk       Tue Oct  2 22:28:19 2001
        +++ files/freebsd.ncbi.mk.orig  Tue Oct  2 22:27:50 2001
        @@ -18,7 +18,7 @@
         #will work only when you have Motif installed!
         NCBI_VIBFLAG = -I/usr/X11R6/include -L/usr/X11R6/lib -DWIN_MOTIF
         NCBI_VIBLIBS = -lXm -lXmu -lXp -lXpm -lXt -lX11 -lXext 
        -NCBI_DISTVIBLIBS = -L/usr/X11R6/lib /usr/X11R6/lib/libXm.a -lXp -lXpm - lXmu -lXt -lX11 -lXext
        +NCBI_DISTVIBLIBS = -L/usr/X11R6/lib /usr/X11R6/lib/libXm.a /usr/X11R6/l ib/libXp.a /usr/X11R6/lib/libXpm.a -lXmu -lXt -lX11 -lXext
         NCBI_OTHERLIBS = -lm
         NCBI_RANLIB = ranlib
         # Used by makedis.csh
        ============END patch-freebsd.ncbi.mk
>Release-Note:
>Audit-Trail:
Responsible-Changed-From-To: freebsd-ports->wjv 
Responsible-Changed-By: wjv 
Responsible-Changed-When: Wed Nov 7 05:43:45 PST 2001 
Responsible-Changed-Why:  
I'm taking this up with the maintainer. 

http://www.FreeBSD.org/cgi/query-pr.cgi?pr=30990 
State-Changed-From-To: open->closed 
State-Changed-By: wjv 
State-Changed-When: Wed Nov 7 23:19:14 PST 2001 
State-Changed-Why:  
Issue resolved after discussions with submitter and maintainer. 

http://www.FreeBSD.org/cgi/query-pr.cgi?pr=30990 
>Unformatted:
