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Message-Id: <201005171339.o4HDdYfM001425@www.freebsd.org>
Date: Mon, 17 May 2010 13:39:34 GMT
From: Ju Pengfei <jupengfei@gmail.com>
To: freebsd-gnats-submit@FreeBSD.org
Subject: New port: science/pyNN A simulator-independent language for building neuronal network models
X-Send-Pr-Version: www-3.1
X-GNATS-Notify:

>Number:         146664
>Category:       ports
>Synopsis:       New port: science/pyNN A simulator-independent language for building neuronal network models
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    wen
>State:          closed
>Quarter:        
>Keywords:       
>Date-Required:  
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Mon May 17 13:40:01 UTC 2010
>Closed-Date:    Tue May 18 08:15:04 UTC 2010
>Last-Modified:  Tue May 18 08:20:01 UTC 2010
>Originator:     Ju Pengfei
>Release:        8.0-RELEASE-p2
>Organization:
Ju Pengfei
>Environment:
>Description:
New port: science/pyNN A simulator-independent language for building neuronal network models

PyNN (pronounced 'pine' ) is a is a simulator-independent language
for building neuronal network models. 

WWW: http://neuralensemble.org/trac/PyNN
>How-To-Repeat:

>Fix:
use this shar file, please.
thanks.

Patch attached with submission follows:

# This is a shell archive.  Save it in a file, remove anything before
# this line, and then unpack it by entering "sh file".  Note, it may
# create directories; files and directories will be owned by you and
# have default permissions.
#
# This archive contains:
#
#	pyNN
#	pyNN/Makefile
#	pyNN/distinfo
#	pyNN/pkg-descr
#	pyNN/pkg-plist
#
echo c - pyNN
mkdir -p pyNN > /dev/null 2>&1
echo x - pyNN/Makefile
sed 's/^X//' >pyNN/Makefile << '78b7110e299b6a33a0add4dba7ffda92'
X# New ports collection makefile for: pyNN
X# Date created:			12 May 2010
X# Whom:				Ju Pengfei <jupengfei@gmail.com>
X#
X# $FreeBSD$
X#
X
XPORTNAME=	pyNN
XPORTVERSION=	0.6.0
XCATEGORIES=	science python
XMASTER_SITES=	CHEESESHOP
XPKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
XDISTNAME=	PyNN-${PORTVERSION}
X
XMAINTAINER=	jupengfei@gmail.com
XCOMMENT=	A simulator-independent language for building neuronal network models
X
XBUILD_DEPENDS=	${PYNUMPY}
XRUN_DEPENDS=	${BUILD_DEPENDS}
X
XUSE_PYTHON=	yes
XUSE_PYDISTUTILS=yes
XPYDISTUTILS_PKGNAME=PyNN
X
X.include <bsd.port.mk>
78b7110e299b6a33a0add4dba7ffda92
echo x - pyNN/distinfo
sed 's/^X//' >pyNN/distinfo << 'c5c6b76e459c1f558111bb068df4103b'
XMD5 (PyNN-0.6.0.tar.gz) = 00b124abc21afad6d2eaf455976fc2e5
XSHA256 (PyNN-0.6.0.tar.gz) = a1367e64b1cd83ac3eae7ee696a1d48e64656f62121e081e3d8449c21e18fbe8
XSIZE (PyNN-0.6.0.tar.gz) = 191346
c5c6b76e459c1f558111bb068df4103b
echo x - pyNN/pkg-descr
sed 's/^X//' >pyNN/pkg-descr << 'ca995d478fcd8f25e3c88a471cbb1978'
XPyNN (pronounced 'pine' ) is a is a simulator-independent language
Xfor building neuronal network models. 
X
XWWW: http://neuralensemble.org/trac/PyNN
ca995d478fcd8f25e3c88a471cbb1978
echo x - pyNN/pkg-plist
sed 's/^X//' >pyNN/pkg-plist << 'ccf8f488a0e16e2daf7ade9145172544'
X%%PYTHON_SITELIBDIR%%/pyNN/__init__.py
X%%PYTHON_SITELIBDIR%%/pyNN/connectors.py
X%%PYTHON_SITELIBDIR%%/pyNN/common.py
X%%PYTHON_SITELIBDIR%%/pyNN/utility.py
X%%PYTHON_SITELIBDIR%%/pyNN/cells.py
X%%PYTHON_SITELIBDIR%%/pyNN/random.py
X%%PYTHON_SITELIBDIR%%/pyNN/synapses.py
X%%PYTHON_SITELIBDIR%%/pyNN/multisim.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/recording.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/__init__.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/connectors.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/simulator.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/cells.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/synapses.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/electrodes.py
X%%PYTHON_SITELIBDIR%%/pyNN/nest/recording.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/__init__.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/connectors.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/simulator.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/cells.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/synapses.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/electrodes.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/nest/recording.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/nest/__init__.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/nest/connectors.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/nest/simulator.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/nest/cells.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/nest/synapses.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/nest/electrodes.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/recording.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/__init__.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/connectors.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/simulator.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/cells.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/synapses.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/connectors_old.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/electrodes.py
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/recording.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/__init__.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/connectors.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/simulator.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/cells.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/synapses.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/connectors_old.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/electrodes.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/recording.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/__init__.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/connectors.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/simulator.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/cells.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/synapses.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/connectors_old.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/pcsim/electrodes.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/recording.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/__init__.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/connectors.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/simulator.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/cells.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/synapses.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/electrodes.py
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/recording.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/__init__.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/connectors.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/simulator.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/cells.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/synapses.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/electrodes.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/recording.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/__init__.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/connectors.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/simulator.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/cells.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/synapses.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/neuron/electrodes.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/recording.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/__init__.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/connectors.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/simulator.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/cells.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/synapses.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/electrodes.py
X%%PYTHON_SITELIBDIR%%/pyNN/brian/recording.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/__init__.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/connectors.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/simulator.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/cells.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/synapses.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/electrodes.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/brian/recording.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/__init__.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/connectors.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/simulator.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/cells.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/synapses.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/brian/electrodes.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/recording/files.py
X%%PYTHON_SITELIBDIR%%/pyNN/recording/__init__.py
X%%PYTHON_SITELIBDIR%%/pyNN/recording/files.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/recording/__init__.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/recording/files.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/recording/__init__.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/stdwa_songabbott.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/reset.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/stdwa_softlimits.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/stdwa_guetig.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/hh_traub.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/vecstim.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/refrac.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/alphasyn.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/adexp.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/netstim2.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/stdwa_symm.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/alphaisyn.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/expisyn.mod
X%%PYTHON_SITELIBDIR%%/pyNN/hoc/tmgsyn.mod
X%%PYTHON_SITELIBDIR%%/pyNN/__init__.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/connectors.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/common.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/utility.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/cells.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/random.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/synapses.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/multisim.pyc
X%%PYTHON_SITELIBDIR%%/pyNN/__init__.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/connectors.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/common.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/utility.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/cells.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/random.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/synapses.pyo
X%%PYTHON_SITELIBDIR%%/pyNN/multisim.pyo
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN/nest
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN/pcsim
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN/neuron
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN/brian
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN/recording
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN/hoc
X@dirrm %%PYTHON_SITELIBDIR%%/pyNN
ccf8f488a0e16e2daf7ade9145172544
exit



>Release-Note:
>Audit-Trail:
Responsible-Changed-From-To: freebsd-ports-bugs->wen 
Responsible-Changed-By: edwin 
Responsible-Changed-When: Mon May 17 13:40:11 UTC 2010 
Responsible-Changed-Why:  
wen@ wants his PRs (via the GNATS Auto Assign Tool) 

http://www.freebsd.org/cgi/query-pr.cgi?pr=146664 
State-Changed-From-To: open->closed 
State-Changed-By: wen 
State-Changed-When: Tue May 18 08:15:03 UTC 2010 
State-Changed-Why:  
New port added. Thanks! 

http://www.freebsd.org/cgi/query-pr.cgi?pr=146664 

From: dfilter@FreeBSD.ORG (dfilter service)
To: bug-followup@FreeBSD.org
Cc:  
Subject: Re: ports/146664: commit references a PR
Date: Tue, 18 May 2010 08:14:27 +0000 (UTC)

 wen         2010-05-18 08:14:12 UTC
 
   FreeBSD ports repository
 
   Modified files:
     science              Makefile 
   Added files:
     science/pyNN         Makefile distinfo pkg-descr pkg-plist 
   Log:
   PyNN(pronounced 'pine') is a simulator-independent language for
   building neuronal network models.
   
   WWW: http://neuralensemble.org/trac/PyNN
   
   PR:             ports/146664
   Submitted by:   Ju Pengfei <jupengfei@gmail.com>
   
   Revision  Changes    Path
   1.186     +1 -0      ports/science/Makefile
   1.1       +25 -0     ports/science/pyNN/Makefile (new)
   1.1       +3 -0      ports/science/pyNN/distinfo (new)
   1.1       +4 -0      ports/science/pyNN/pkg-descr (new)
   1.1       +138 -0    ports/science/pyNN/pkg-plist (new)
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>Unformatted:
