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Message-Id: <200804052104.m35L4oL1099295@www.freebsd.org>
Date: Sat, 5 Apr 2008 21:04:50 GMT
From: "M. L. Dodson" <mldodson@comcast.net>
To: freebsd-gnats-submit@FreeBSD.org
Subject: Maintainer update of biology/nab and mark for deprecation
X-Send-Pr-Version: www-3.1
X-GNATS-Notify: mldodson@houston.rr.com

>Number:         122474
>Category:       ports
>Synopsis:       Maintainer update of biology/nab and mark for deprecation
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          closed
>Quarter:        
>Keywords:       
>Date-Required:  
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Sat Apr 05 21:10:01 UTC 2008
>Closed-Date:    Sun Apr 06 08:39:28 UTC 2008
>Last-Modified:  Sun Apr  6 08:40:03 UTC 2008
>Originator:     M. L. Dodson
>Release:        6.3-RELEASE
>Organization:
Active Site Dynamics
>Environment:
FreeBSD wotan.mlandml.net 6.3-RELEASE FreeBSD 6.3-RELEASE #1: Tue Feb 12 18:57:01 CST 2008     mldodson@wotan.mlandml.net:/usr/obj/usr/src/sys/WOTAN  i386
>Description:
I am the maintainer of this port  This pr (1) updates my email address. (2) Sets a new MASTER_SITES as the software has been superceded by AmberTools-1.0 from the same development group, and the distribution is no longer available from them. (3) Marks the port as DEPRECATED since the software has been superceded.  I will prepare a port of AmberTools soon, but in the meantime I will be hosting the nab distribution on my own server as it is no longer available from the developer.
>How-To-Repeat:
N. A.
>Fix:
--- Makefile.orig       2007-12-16 09:01:18.000000000 -0600
+++ Makefile    2008-04-05 15:54:08.000000000 -0500
@@ -1,22 +1,24 @@
 # New ports collection Makefile for: nab
 # Date created:         Sept. 10, 2000
-# Whom:                 M. L. Dodson <mldodson@houston.rr.com>
+# Whom:                 M. L. Dodson <mldodson@comcast.net>
 #
-# $FreeBSD: ports/biology/nab/Makefile,v 1.21 2007/10/28 21:42:23 miwi Exp $
+# $FreeBSD: $
 #
 
 PORTNAME=      nab
 PORTVERSION=   5.1.2
 PORTREVISION=  1
 CATEGORIES=    biology
-MASTER_SITES=  http://www.scripps.edu/mb/case/
+MASTER_SITES=  http://www.activesitedynamics.com/mldodson/
 
-MAINTAINER=    mldodson@houston.rr.com
+MAINTAINER=    mldodson@comcast.net
 COMMENT=       A language for macromolecules
 
 BUILD_DEPENDS= ucpp:${PORTSDIR}/devel/ucpp
 RUN_DEPENDS=   ucpp:${PORTSDIR}/devel/ucpp
 
+DEPRECATED=    Superceded by AmberTools (by same development group)
+
 MAKE_ENV+=     NABHOME=${WRKSRC} ARCH= PATH=${WRKSRC}/bin:${PATH} \
                CFLAGS="${CFLAGS}" OCFLAGS="${CFLAGS}" FFLAGS="${FFLAGS}"
 


>Release-Note:
>Audit-Trail:
Class-Changed-From-To: maintainer-update->change-request 
Class-Changed-By: edwin 
Class-Changed-When: Sat Apr 5 21:10:11 UTC 2008 
Class-Changed-Why:  
Fix category (submitter is not maintainer) (via the GNATS Auto Assign 
Tool) 

http://www.freebsd.org/cgi/query-pr.cgi?pr=122474 
State-Changed-From-To: open->feedback 
State-Changed-By: edwin 
State-Changed-When: Sat Apr 5 21:10:15 UTC 2008 
State-Changed-Why:  
Awaiting maintainers feedback (via the GNATS Auto Assign Tool) 

http://www.freebsd.org/cgi/query-pr.cgi?pr=122474 
State-Changed-From-To: feedback->closed 
State-Changed-By: rafan 
State-Changed-When: Sun Apr 6 08:39:27 UTC 2008 
State-Changed-Why:  
Committed. Thanks! 

http://www.freebsd.org/cgi/query-pr.cgi?pr=122474 

From: dfilter@FreeBSD.ORG (dfilter service)
To: bug-followup@FreeBSD.org
Cc:  
Subject: Re: ports/122474: commit references a PR
Date: Sun,  6 Apr 2008 08:39:24 +0000 (UTC)

 rafan       2008-04-06 08:39:20 UTC
 
   FreeBSD ports repository
 
   Modified files:
     biology/nab          Makefile 
   Log:
   - Update maintainer's email
   - Mark as deprecated
   
   PR:             ports/122474
   Submitted by:   M. L. Dodson <mldodson at comcast.net> (maintainer with another email)
   
   Revision  Changes    Path
   1.22      +5 -3      ports/biology/nab/Makefile
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>Unformatted:
