Entrez protein query

From owner-celegans@net.bio.net Sun Jul 20 23:00:00 1997 Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!europa.clark.net!news.maxwell.syr.edu!news.cis.ohio-state.edu!nntp.sei.cmu.edu!bb3.andrew.cmu.edu!goldenapple.srv.cs.cmu.edu!das-news2.harvard.edu!oitnews.harvard.edu!news.dfci.harvard.edu!usenet From: Myles Brown Newsgroups: bionet.celegans Subject: Cosmid F52E1 Date: Mon, 21 Jul 1997 16:31:25 -0400 Organization: Dana-Farber Cancer Institute Lines: 158 Message-ID: <33D3C6FE.2C6B@dfci.harvard.edu> Reply-To: 44, Binney, Street, Boston, MA, 02115 NNTP-Posting-Host: 155.52.82.198 Mime-Version: 1.0 Content-Type: multipart/mixed; boundary="------------2002F85458" X-Mailer: Mozilla 3.0Gold (Macintosh; I; PPC) This is a multi-part message in MIME format. --------------2002F85458 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit Dear colleagues, My lab has cloned an estrogen receptor associated protein from a human cDNA library with very strong homology to an orf in the sequenced C. elegans cosmid F52E1. Does anyone know of mutants which map to this cosmid? I would very be interested in collaborating with someone in the C. elegans world to study this gene. Thanks, Myles Brown Dana-Farber Cancer Institute 44 Binney Street Boston, MA 02115 Tel 617-632-3948 Fax 617-632-5417 email: Myles_Brown@dfci.havard.edu --------------2002F85458 Content-Type: text/html; charset=us-ascii; name="query" Content-Transfer-Encoding: 7bit Content-Disposition: inline; filename="query" Content-Base: "http://www.ncbi.nlm.nih.gov/htbin-post /Entrez/query?form=6&dopt=g&db=p&ui d=01695240" Entrez protein query

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LOCUS       1695240       819 aa                              29-NOV-1996
DEFINITION  No definition line found.
ACCESSION   1695240
PID         g1695240
DBSOURCE    GENBANK: locus CELF52E1, accession U41109
KEYWORDS    .
SOURCE      Caenorhabditis elegans strain=Bristol N2.
  ORGANISM  Caenorhabditis elegans
            Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda;
            Secernentea; Rhabditia; Rhabditida; Rhabditina; Rhabditidae;
            Caenorhabditis.
REFERENCE   1  (residues 1 to 819)
  AUTHORS   Wilson,R., Ainscough,R., Anderson,K., Baynes,C., Berks,M.,
            Bonfield,J., Burton,J., Connell,M., Copsey,T., Cooper,J.,
            Coulson,A., Craxton,M., Dear,S., Du,Z., Durbin,R., Favello,A.,
            Fulton,L., Gardner,A., Green,P., Hawkins,T., Hillier,L., Jier,M.,
            Johnston,L., Jones,M., Kershaw,J., Kirsten,J., Laister,N.,
            Latreille,P., Lightning,J., Lloyd,C., McMurray,A., Mortimore,B.,
            O'Callaghan,M., Parsons,J., Percy,C., Rifken,L., Roopra,A.,
            Saunders,D., Shownkeen,R., Smaldon,N., Smith,A., Sonnhammer,E.,
            Staden,R., Sulston,J., Thierry-Mieg,J., Thomas,K., Vaudin,M.,
            Vaughan,K., Waterston,R., Watson,A., Weinstock,L.,
            Wilkinson-Sproat,J. and Wohldman,P.
  TITLE     2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
            elegans
  JOURNAL   Nature 368 (6466), 32-38 (1994)
  MEDLINE   94150718
REFERENCE   2  (residues 1 to 819)
  AUTHORS   Le,TT and Rifkin,L.
  TITLE     The sequence of C. elegans cosmid F52E1
  JOURNAL   Unpublished (1996)
REFERENCE   3  (residues 1 to 819)
  AUTHORS   Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-1995) Robert Waterston
REFERENCE   4  (residues 1 to 819)
  AUTHORS   Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-1996)
COMMENT     Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Caenorhabditis elegans"
                     /strain="Bristol N2"
                     /chromosome="V"
                     /clone="F52E1"
     Protein         1..819
     CDS             1..819
                     /note="coded for by C. elegans cDNA yk63f7.3; coded for by
                     C. elegans cDNA yk63f7.5; coded for by C. elegans cDNA
                     yk47e10.3; coded for by C. elegans cDNA yk47g9.3; coded
                     for by C. elegans cDNA yk47e10.5; coded for by C. elegans
                     cDNA yk47g9.5; coded for by C. elegans cDNA yk54f1.5;
                     coded for by C. elegans cDNA yk66b6.5; coded for by C.
                     elegans cDNA CEMSF22F; coded for by C. elegans cDNA cm7b4;
                     coded for by C. elegans cDNA yk44f11.3; coded for by C.
                     elegans cDNA yk44f11.5; coded for by C. elegans cDNA
                     yk45c12.3; coded for by C. elegans cDNA yk45c12.5"
                     /coded_by="complement(join(U41109:39710..40286,
                     U41109:45207..45340,U41109:45983..46058,
                     U41109:46256..46319,U41109:46901..47064,
                     U41109:47510..47628,U41109:48202..48303,
                     U41109:50546..50702,U41109:50746..51116,
                     U41109:51164..51287,U41109:51339..51621,
                     U41109:51783..52008,U41109:56048..56110))"
ORIGIN      
        1 mgsfgsvssv ppgsakipaf qmdytitetd tlervaashd ctvgelmkln kmasrmvfpg
       61 qkilvplana ddvfdppssa sslkssgnqi sgienaedgi rkgpggavpa hvrrgsftkt
      121 qsapiprgsn deadtdclqr flkikvkqvt esdgtvsgtl lvtpnclmfd pdvshplvke
      181 ngpdlygmva nmdeiqsvsv ykeisgltgd kaekkrdifd pdhlrtpeds pkkqikqnge
      241 ieiakneeva feagsvdsnh spkfgsdial paiseetkds pceeakgdls rnrsatlgde
      301 eiqlrarsrt ssqassnder prsfseldtp segknigrfs pnaarrsfgk lgrtlsarak
      361 siqgtvtsga ekvvgtavqg tktvahgvvt htksaadtlq sgiengakaa advagrvvdk
      421 gqslmsesin gvteifsvpd feqpakspla mkreqslakl qdlrrqtaea rensakenha
      481 gvfacatssd eapdlfaavd eimernriqs ndstasqspi lpfymavrlt rnkkkkksst
      541 sspsydedia fgnklkrefa vprnqadniy hfllqwspdk ygldtttstt eepssvmsnd
      601 gqdkgfivlg snadeslggt lfcfnytinn mnnnnnnnde khknsnvilt efdvkqmmar
      661 sradtvcvss lrrqsseeae ksiletvrqt gsdgeeeasg mskkgsitsr kssgshdsgv
      721 gtrpnspias nlhmpsssnn deviefkvpe itvslaedts nseeqkkkrn ikraimkkvf
      781 kkksakaiem rtrskslgsn aiysskfvwf csrmvyfkf
//

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