From owner-metabolic-reg@net.bio.net Mon Jan 17 22:00:00 1994 Path: biosci!ysics.physics.sunysb.edu!psinntp!psinntp!uunet!cs.utexas.edu!howland.reston.ans.net!pipex!doc.ic.ac.uk!daresbury!not-for-mail From: "" Newsgroups: bionet.metabolic-reg Subject: Re: proceedings BTK 1992 Date: 17 Jan 1994 14:30:09 -0000 Lines: 332 Sender: daemon@mserv1.dl.ac.uk Distribution: bionet Message-ID: <2he7dh$1s0@mserv1.dl.ac.uk> Original-To: btk-mca@dl.ac.uk Dear Biothermokineticists, I did overhear Pedro Mendes' inquiry concerning the proceedings. Recently, Plenum Press (New York and London) sent me a sales bulletin announcing the book "Modern Trends in Biothermokinetics" (proceedings of the Fifth International Meeting held in Bordeaux-Bombannes, France, September 23-26, 1992, eds S. Schuster, M. Rigoulet, R. Ouhabi and J.-P. Mazat) for January/February 1994. The ISBN no. is 0-306-44579-4. We have expected it to appear earlier, but it's partly our fault as well (I changed position two times during the period of edition). Attached goes the table of contents with the final page numbers. Greetings, Stefan=Schuster @ rz.hu-berlin.de ***** ATTACHMENT: u:\worddoc\contword.asc ***** CONTENTS I. Thermodynamics and Kinetics of Transport Processes and Biological Energy Transduction 1 Frontiers in the Mathematical Description of "Biothermokinetic" Phenomena G. R. Welch 3-6 Monitoring a Heterogeneous Coupled System Using Soluble and Biologically Localized Firefly Luciferase as a Probe for Bulk and Local ATP C. Aflalo 7-10 Control of Cytochrome C Oxidase: Kinetic, Thermodynamic or Allosteric? P. Nicholls 11-16 Mechanism of Bupivacaine Uncoupling in Rat Heart Mitochondria F. Sztark, P. Schonfeld, P. Dabadie and J.-P. Mazat 17-22 Mosaic Non-Equilibrium Thermodynamics as a Tool in the Study of Oxidative Phosphorylation B.H. Groen, J.A. Berden and K. van Dam 23-26 The Redox State of Cytochromes as a New Tool to Assess the Thermodynamic State of Mitochondria S. Luvisetto, I. Schmehl, M. Canton and G. F. Azzone 27-32 Thermodynamic Response Paradigm and its Application to Oxidative Phosphorylation B. Korzeniewski and W. Froncisz 33-38 A Model Study on the Interrelation between the Transmembrane Potential and pH Difference across the Mitochondrial Inner Membrane S. Schuster and J.-P. Mazat 39-44 Comparison of Retinal-Based and Chlorophyll-Based Photosynthesis: A Biothermokinetic Description of Photochemical Reaction Centers K.J. Hellingwerf, W. Crielaard and H.V. Westerhoff 45-52 Regulation of Energy Flux of Yeast during Steady State and Oscillatory Growth R. Olz, K. Larsson, Ch. Larsson, E. Gnaiger and L. Gustafsson 53-60 Free-Energy Coupling Mediated by Dynamic Interactions between Membrane Proteins R.D. Astumian, B. Robertson and M. Bier 61-66 Characterization of Energy-Dependent Phosphate Uptake by Blue-Green Alga Anacystis nidulans: Adaptation to External Phosphate Levels Obeys a Linear Flow-Force Relation G. Falkner, F. Wagner and R. Falkner 67-70 Brownian Dynamics Simulation of Charged Membrane Components. Implications for their Lateral Distribution and Voltage Dependence of Ion Transport through Membranes D. Walther, P. Kuzmin and E. Donath 71-76 Evolutionary Strategies and the Optimization of Carrier Models J. Lenz and M. Hofer 77-81 II. Modeling of Cell Processes with Applications to Biotechnology and Medicine 83 Mathematical Model of the Creatine Kinase Reaction Coupled to Adenine Nucleotide Translocation and Oxidative Phosphorylation M.K. Aliev and V.A. Saks 85-92 Critical Regulation of Multienzyme Complexes: A Kinetic Model for the Mammalian Pyruvate Dehydrogenase Complex B.N. Goldstein and V.A. Selivanov 93-96 The Analysis of Flux in Substrate Cycles D.A. Fell 97-101 Estimation of Enzymatic Flux Rates from Kinetic Isotope Experiments H.-G. Holzhutter and A. Schwendel 103-107 When Going Backwards Means Progress: On the Solution of Biochemical Inverse Problems Using Artificial Neural Networks D.B. Kell, Ch.L. Davey, R. Goodacre and H.M. Sauro 109-114 Quality Assessment of a Metabolic Model and Systems Analysis of Citric Acid Production by Aspergillus niger N. Torres, C. Regalado, A. Sorribas and M. Cascante 115-124 Steady-State Measurements and Identifiability of Regulatory Patterns in Metabolic Studies A. Sorribas and M. Cascante 125-131 A Biochemical "NAND" Gate and Assorted Circuits H.M. Sauro 133-140 Dynamic Modeling of Cell, Substrate, and Product Concentrations and pH in E. coli- Containing Agar Membranes J. Lefebvre and J.-C. Vincent 141-147 The Interpretation of Flow Cytometry Profiles in Terms of Gene Dosage and Gene Expression W.G. Bardsley and E.K. Kyprianou 149-153 Invention of a Useful Transcriptional Regulation System Using Mechanistic Mathematical Modeling W. Chen, S.-B. Lee, P. Kallio and J.E. Bailey 155-158 Tumor Progression and Catastrophe Theory H. Daams, S. Cortassa, M. A. Aon and H.V. Westerhoff 159-166 Biochemical Neuron: Application to Neural Network Studies and Practical Implementation of Device M. Okamoto, Y. Maki and T. Sekiguchi 167-172 Example of the Use of Computers to Study the Variability of Seed Development of a Parasitic Weed, Striga hermonthica (Del.) Benth. (Scrophulariaceae), after Treatment by Herbicide J. Pare 173-176 III. Metabolic Control Theory: New Developments and Applications 177 Responses of Metabolic Systems to Large Changes in Enzyme Activities J.R. Small and H. Kacser 179-185 An Extension of Metabolic Control Analysis to Larger Parameter Perturbations by Inclusion of Second-Order Effects T. Hofer and R. Heinrich 187-192 A Control Analysis of Metabolic Regulation J.-H.S. Hofmeyr and A. Cornish-Bowden 193-198 Regulation and Homeostasis in Metabolic Control Theory: Interplay between Fluctuations of Variables and Parameter Changes D. Kahn and H.V. Westerhoff 199-204 Sum of the Flux Control Coefficients: What is it Equal to in Different Systems? B.N. Kholodenko and H.V. Westerhoff 205-210 Control Analysis of Metabolic Channeling P. Mendes and D.B. Kell 211-216 Path Analysis in General Control Theory G. Meszena 217-224 Phenomenological Kinetics and the Top-Down Approach to Metabolic Control Analysis G.C. Brown 225-228 A Modular Approach to the Description of the Control of Connected Metabolic Systems S. Schuster, D. Kahn and H.V. Westerhoff 229-235 Control Analysis of Isoenzymic Pathways: Application of Directed Graphs and Electrical Analogs A.K. Sen 237-242 Derivation of a General Matrix Method for the Calculation of Control Coefficients M. Ehlde and G. Zacchi 243-252 Internal Regulation. The C.E=I=E.C Square-Matrix Method Illustrated for a Simple Case of a Complex Pathway A.A. van der Gugten and H.V. Westerhoff 253-262 Multiplicity of Control H.V. Westerhoff, P.R. Jensen, A.A. van der Gugten, D. Kahn, B.N. Kholodenko, S. Schuster, N. Oldenburg, K. van Dam and W.C. van Heeswijk 263-268 Control of Threonine Biosynthesis in E. coli B. Rais, R. Heinrich, M. Malgat and J.-P. Mazat 269-274 Control Coefficients in Cellular Cation Homeostasis: A Model Analysis J. Siegenbeek van Heukelom 275-279 IV. Control and Regulation of Oxidative Phosphorylation 281 Experimental Discrimination between Proton Leak across the Mitochondrial Membrane and Slip in the Proton Pumps of the Electron Transport Chain M.D. Brand and Ph. Diolez 283-286 Does Redox Slip Contribute Significantly to Mitochondrial Respiration? K.D. Garlid, C. Semrad and V. Zinchenko 287-293 Mechanistic Stoichiometry of Yeast Mitochondrial Oxidative Phosphorylation: A Behavior of Working Engine V. Fitton, M. Rigoulet and B. Guerin 295-299 Mitochondrial Creatine Kinase: Biothermokinetics of the Reaction and its Role in the Regulation of Energy Fluxes in Muscle Cells in vivo V.A. Saks, G.V. Elizarova, Yu. O. Belikova, E.V. Vasileva, A.V. Kuznetsov, L. Petrova, N.A. Perov and F.N. Gellerich 301-312 Effect of Macromolecules on ADP-Channeling into Mitochondria F.N. Gellerich, M. Wagner, M. Kapischke and D. Brdiczka 313-318 Control of ATP Flux in Rat Muscle Mitochondria S. Jouaville, F. Ichas, T. Letellier, M. Malgat and J.-P. Mazat 319-325 Control of Respiration of Mitochondria from Euglena gracilis Determined by Means of Metabolic Control Analysis: Comparison of Oxidation of Matrix- and Cytosolic NADH A. Kesseler, S. Kisteneich and K. Brinkmann 327-332 Top Down Metabolic Control Analysis of Oxidative Phosphorylation at Different Rates in Potato Tuber Mitochondria A. Kesseler, Ph. Diolez, K. Brinkmann and M.D. Brand 333-338 The Influence of Phosphate on the Distribution of Flux Control among the Enzymes of Oxidative Phosphorylation in Rat Skeletal Muscle Mitochondria W.S. Kunz, E. Wisniewski and F.N. Gellerich 339-342 The Molecular Basis of Threshold Effects Observed in Mitochondrial Diseases J.-P. Mazat, T. Letellier and M. Malgat 343-346 Control of Respiration in Heart Mitochondria. Comparative Study of Oxidation of Succinate and NAD-Dependent Substrates V. Mildaziene, V. Borutaite, Z. Katiliute, R. Petroliunaite, L. Ivanoviene, A. Toleikis and B.N. Kholodenko 347-350 Mechanisms of the Effects of Hypothyroidism and Hyperthyroidism in Rats on Respiration Rate in Isolated Hepatocytes M.-E. Harper and M.D. Brand 351-356 Substrate and Calcium Dependence of the Pyridine Nucleotide and Flavine Redox State in Rat Heart Mitochondria Respiring at Different Metabolic States R.C. Scaduto, Jr. and A.V. Panov 357-365 V. Investigation of Cell Processes 367 Modification of Mitochondrial Metabolism by Amino Acid-Induced Cell Swelling P. Espie, M. Rigoulet and B. Guerin 369-376 Estimation of the Mechanism of Peptide Binding to HLA Class II Molecules E. Furuichi, N. Kamikawaji, T. Sasazuki and S. Kuhara 377-381 Shift of a Peptide Bond Equilibrium towards Synthesis Catalyzed by alpha-Chymotrypsin B. Deschrevel and J.-C. Vincent 383-390 Modulation of Cellular Energy State and DNA Supercoiling in E. coli P.R. Jensen, N. Oldenburg, B. Petra, O. Michelsen and H.V. Westerhoff 391-396 Cascade Control of Ammonia Assimilation W.C. van Heeswijk, H.V. Westerhoff and D. Kahn 397-399 Photovoltage Measurements as a Probe of Light Distribution and Ion Movements around Photosynthetic Apparatus G. Meszena and H.V. Westerhoff 401-406 Neural Networks Applied to Cell Signaling and Chemical Communication in Cell Networks J.A. Prideaux, J.L. Ware, A.M. Clarke and D.C. Mikulecky 407-411 Synchronization of Glycolytic Oscillations in Intact Yeast Cells P. Richard, B. Teusink, H.V. Westerhoff and K. van Dam 413-416 Control in Electrophysiology and Intracellular Signal Transduction H. van Mil and J. Siegenbeek van Heukelom 417-422 Structure-Function Relationship of Magainins. Studies in Liposomal Model Systems A. Vaz Gomes, A. de Waal, J.A. Berden and H.V. Westerhoff 423-425 The Communication between the Mitochondrial and Cytosolic Branches of Energy Metabolism F. Laterveer, F. van Dorsten, A. van der Toorn and K. Nicolay 427-433 Calculation of Metabolic Fluxes by Mathematical Modeling of Carbon-13 Distribution in Metabolites. I. Presentation of the Mathematical Model R. Schuster, J.-C. Portais, F. Garderet, M. Merle, J.-P. Mazat and P. Canioni 435-442 Calculation of Metabolic Fluxes by Mathematical Modeling of Carbon-13 Distribution in Metabolites. II. Application to the Study of C6 Cell Metabolism J.-C. Portais, R. Schuster, F. Garderet, M. Merle, J.-P. Mazat and P. Canioni 443-447 VI. Computer Programs for Modeling Metabolic Systems 449 MLAB: An Advanced System for Mathematical and Statistical Modeling G.D. Knott 451-454 SIMFIT - A Computer Package for Simulation, Curve Fitting and Statistical Analysis Using Life Science Models W.G. Bardsley 455-458 Optimal Design for Model Discrimination. Choosing the Best Spacing and Density of Design Points W.G. Bardsley and E.M. Melikhova 459-462 GEPASI: A User Oriented Metabolic Simulator P. Mendes 463-466 Object Oriented Simulation of Metabolic Processes H.J. Stoffers, B. van Stigt, P. Richard, A.A. van der Gugten, H.V. Westerhoff and G.J.F. Blommestijn 467-472 MetaCon - A Computer Program for the Algebraic Evaluation of Control Coefficients of Metabolic Networks S. Thomas and D.A. Fell 473-478 VII. Oenological Epilogue 479 Champagne in Holland: An Experiment in Oenology H. Daams and A. Daams-Moussault 481-483 Index 485 .