From owner-celegans@net.bio.net Wed Jun 04 23:00:00 1997 Path: biosci!rutgers.rutgers.edu!gatech!csulb.edu!hammer.uoregon.edu!news-peer.gsl.net!europa.clark.net!disgorge.news.demon.net!demon!dispatch.news.demon.net!demon!rill.news.pipex.net!pipex!server1.netnews.ja.net!lyra.csx.cam.ac.uk!news From: Steve Jones Newsgroups: bionet.celegans Subject: Blast server filtering Date: Thu, 05 Jun 1997 15:09:44 +0100 Organization: The Sanger Centre Message-ID: <3396C8A8.41C6@sanger.ac.uk> NNTP-Posting-Host: barry.sanger.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.01Gold (X11; I; OSF1 V3.2 alpha) Lines: 20 Hi all, I have had a number of requests to provide a low complexity filtering facility for the C. elegans Blast server. Thus I presume this issue is also of interest to a larger silent majority. This is just to say that filtering (at least for protein based searches blastx, tblastn, tblastx) now exists using the NCBI's SEG program. Dust for blastn will follow soon. More detailed explanations can be obtained from the Blast server itself:- http://www.sanger.ac.uk/Projects/C_elegans/blast_server.shtml Best wishes, Steve Jones Sanger Centre .