From owner-drosophila@net.bio.net Thu Apr 07 23:00:00 1994 Path: biosci!MORGAN.HARVARD.EDU!flybase From: flybase@MORGAN.HARVARD.EDU (FlyBase Project Members) Newsgroups: bionet.drosophila Subject: FlyBase Update - function, synonym, and identifier tables Date: 8 Apr 1994 08:47:47 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 28 Sender: daemon@net.bio.net Distribution: bionet Message-ID: <9404081548.AA18489@morgan.harvard.edu> NNTP-Posting-Host: net.bio.net FlyBase - new versions of function, synonym and identifier tables. The following four files were updated today. All were compiled from the genes94 file. flybase/genes/synonyms.txt An alphabetical list of gene and allele synonyms. Note that this is the first time a table that includes allele synonyms has been available. This table includes 12,980 synonyms (see flybase/genes/synonyms.doc). flybase/function/function.txt A list of genes sorted by their 'function' (see flybase/function/function.doc). The format is somewhat different from that used before. For each 'function' the corresponding genes are listed (as their symbols) on a line, each symbol being separated by a semicolon. This table includes all Enzyme Commission numbers and all Drosophila records from the Prosite Database. This release recognises 1167 'functions', although this includes some overlaps and synonymy. flybase/seqs/na.txt and flybase/seqs/prot.txt These are tables of nucleic acid (Genbank, NCBI, EMBL, DDBJ) and protein (SwissProt, PIR) sequence accession numbers corresponding to Drosophila genes. These tables are primarily for the databanks, so that they can cross-reference FlyBase (see flybase/seqs/sequences.doc). The protein table includes 2215 different AC numbers, the nucleic acid table 3917. As always, comments and corrections to flybase@morgan.harvard.edu .