From owner-dros@hgmp.mrc.ac.uk Tue Jan 15 01:00:57 2002 Return-Path: Received: from localhost (localhost [127.0.0.1]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 23FAB17AE1 for ; Tue, 15 Jan 2002 01:00:56 +0000 (GMT) Received: from localhost (localhost [127.0.0.1]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 2AB2017AE7 for ; Tue, 15 Jan 2002 01:00:54 +0000 (GMT) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6020) id 9C59117AE1; Tue, 15 Jan 2002 01:00:52 +0000 (GMT) Received: from localhost (localhost [127.0.0.1]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 22C4617AC9 for ; Mon, 14 Jan 2002 20:27:44 +0000 (GMT) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 60001) id 3961017AA1; Mon, 14 Jan 2002 20:27:43 +0000 (GMT) To: bionet-drosophila@net.bio.net From: sschulze@sfu.ca (Sandra Schulze) Newsgroups: bionet.drosophila Subject: gene analysis software Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: <3.0.6.32.20020114122530.007a2ab0@pop3.norton.antivirus> Mime-Version: 1.0 Content-Type: text/plain; charset="us-ascii" X-Received: from localhost (localhost [127.0.0.1]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id DA48D17ACF for ; Mon, 14 Jan 2002 20:27:40 +0000 (GMT) X-Received: from rm-rstar.sfu.ca (rm-rstar.sfu.ca [142.58.120.21]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 1F67717ACD for ; Mon, 14 Jan 2002 20:27:39 +0000 (GMT) X-Received: from nameserver (hondalab2.mbb.sfu.ca [142.58.209.23]) by rm-rstar.sfu.ca (8.10.1/8.10.1/SFU-5.0H) with SMTP id g0EKRbB24962 for ; Mon, 14 Jan 2002 12:27:37 -0800 (PST) X-Sender: sschulze/popserver.sfu.ca@pop3.norton.antivirus (Unverified) X-Mailer: QUALCOMM Windows Eudora Light Version 3.0.6 (32) X-To: dros@net.bio.net Date: Tue, 15 Jan 2002 01:00:52 +0000 (GMT) Sender: owner-dros@hgmp.mrc.ac.uk Precedence: bulk Hi there - I wonder if anyone could point me in the direction of on- line (free) software which can align a protein sequence with genomic DNA? I am trying to get some pictures together for publication which describe the structure of genes in a species for which there is no genome project (Drosophila virilis). I have seen figures in papers from the early 1990's in which the protein (single letter amino acid code) is aligned with the genomic DNA sequence, thus illustrating intron-exon structure, overall gene size, etc. Genbank does it too (graphics option) but how can i do this for my virilis genes on my PC? Thanks in advance, Sandra Schulze Dept. Molecular Biology & Biochemistry Simon Fraser University Burnaby BC CANADA Socrates was a famous Greek teacher who went around giving people advice.They killed him. Socrates died from an overdose of wedlock. After his death, his career suffered a dramatic decline. --- .