From owner-announce@net.bio.net Thu Dec 02 18:02:18 1999 Path: hgmp.mrc.ac.uk!not-for-mail From: "Tatsuya Akutsu" Newsgroups: bionet.announce Subject: RECOMB 2000 accepted papers Date: 2 Dec 1999 18:02:17 -0000 Organization: Human Genome Center, Inst. of Medical Science, Univ. of Lines: 188 Approved: modmail@eosbiotech.com Message-ID: <826c79$q0s$1@mercury.hgmp.mrc.ac.uk> NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk X-Trace: niobium.hgmp.mrc.ac.uk 944157738 549 193.62.192.80 (2 Dec 1999 18:02:18 GMT) X-Complaints-To: news@hgmp.mrc.ac.uk NNTP-Posting-Date: 2 Dec 1999 18:02:18 GMT Xref: hgmp.mrc.ac.uk bionet.announce:156 [ You may possibly receive this message multiple times. We sincerely apologize for the inconvenience.] Fourth Annual International Conference on Computational Molecular Biology (RECOMB 2000) April 8-11, 2000, Tokyo, Japan http://recomb2000.ims.u-tokyo.ac.jp The following papers were accepted for presentation at RECOMB 2000. Further information about the conference (including call for posters, registration and accommodation) is available at the RECOMB 2000 Web site. ==================================================================== Chor, Hendy, Holland, Penny Multiple Maxima of Likelihood in Phylogenetic Trees: An Analytic Approach Akutsu, Miyano, Kuhara Algorithms for Identifying Boolean Networks and Related Biological Networks Based on Matrix Multiplication and Fingerprint Function Marsan, Sagot Extracting structured motifs using a suffix tree - Algorithms and application to promoter consensus identification Linial, Portugaly Probabilities for having a new fold on the basis of a map of all protein sequences Chen, Kwong, Li A Compression Algorithm for DNA Sequences and Its Applications in Genome Comparison Liwo, Pillardy, Czaplewski, Lee, Ripoll, Groth, Rodziewicz-Motowidlo, Kazmierkiewicz, Wawak, Oldziej, Scheraga UNRES -- a united-residue force field for energy-based prediction of protein structure - origin and significance of multibody terms Kann, Goldstein Optimizing for Success: A New Score Function For Distantly Related Protein Sequence Comparison Akutsu, Arimura, Shimozono On Approximation Algorithms for Local Multiple Alignment Teichmann, Chothia, Church, Park PDB-ISL: an intermediate sequence library for fast assignment of protein structures to sequences Pevzner, Dancik, Tang Mutation-Tolerant Protein Identification by Mass-Spectrometry Batzoglou, Berger, Mesirov, Lander Sequencing a Genome by Walking with Clone-end Sequences: A Mathematical Analysis Batzoglou, Pachter, Mesirov, Berger, Lander Comparative Analysis of Mouse and Human DNA and Applications to Exon Prediction Bienkowska, Yu, Zarakhovich, Rogers, Smith Comprehensive statistical method for protein fold recognition Ohkubo, Crippen Determining Contact Energy Function for Continuous State Models of Globular Protein Conformations Bundschuh An Analytic Approach to Significance Assessment in Local Sequence Alignment with Gaps Apostolico, Bejerano Optimal Amnesic Probabilistic Automata or How to Learn and Classify Proteins in Linear Time and Space Heber, Stoye, Hoheisel, Vingron Contig Selection in Physical Mapping Hallett, Lagergren New Algorithms for the Duplication-Loss Model Desper, Vingron Tree Fitting: an Algebraic Approach Using Profile Distances Lyngso, Pederson Pseudonknots in RNA Secondary Structures Chen, Durand, Farach-Colton Notung: Dating gene duplications using gene family trees Xu, Xu, Crawford, Einstein, Serpersu Protein Structure Determination using Protein Threading and Sparse NMR Data Slonim, Tamayo, Mesirov, Golub, Lander Class prediction and discovery using gene expression data Sorenson, Head-Gordon Matching simulation and experiment: a new simplified model for simulating protein folding Zien, Zimmer, Lengauer A simple iterative approach to parameter optimization Ben-Dor, Karp, Schiwkowski, Yakhini Universal DNA tag systems: a combinatorial design scheme Sankoff, Bryant, Deneault, Lang, Burger Early Eukaryote Evolution Based on Mitochondrial Gene Order Breakpoints Yona, Levitt A unified sequence-structure classification of protein sequences: combining sequence and structure in a map of the protein space Bailey-Kellogg, Widge, Kelley, Berardi, Bushweller, Donald The NOSEY Jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data Ben-Dor, Bruhn, Friedman, Nachman, Schummer, Yakhini Tissue classification with gene expression profiles Kececioglou, Shete, Arnold Reconstructing distances in physical maps of chromosomes with nonoverlapping probes Hart, Royyuru, Stolovitzky, Califano Systematic and Automated Discovery of Patterns in PROSITE Families Althaus, Kohlbacher, Lenhof, Mueller A combinatorial approach to protein docking with flexible side-chains Friedman, Linial, Nachman, Pe'er Using Bayesian Networks to Analyze Expression Data Preparata, Upfal Sequencing-by-hybridization at the information-theory bound: an optimal algorithm Tomita, Hashimoto, Takahashi, Matsuzaki, Matsushima, Yugi, Miyoshi, Nakano, Saito, Shimizu, Nakayama The E-CELL project: towards integrative simulation of cellular processes ----------------------------------------------------------------- Tatsuya Akutsu (Publicity Chair of RECOMB 2000 Organizing Committee) For further enquiries please contact: recomb2000@ims.u-tokyo.ac.jp .