From owner-biophysics@net.bio.net Mon Apr 04 23:00:00 1994
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From: avarg@ahpcrc.umn.edu (Anthony Varghese)
Subject: Models of Membrane Excitability
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Dear Netters,

  Sorry for the long delay but here is an update of my search for membrane
models. I have listed articles in bibtex format without the KEY field:


Abbreviations:
amjphsl   = "American Journal of Physiology"
jphsl     = "Journal of Physiology (London)"
biophys   = "Biophysical Journal"
biocyb    = "Biological Cybernetics"
proysb    = "Proceedings of the Royal Society, London, series B"
circres   = "Circulation Research"


1.      AUTHOR  = "A. L. Hodgkin and A. F. Huxley",
        TITLE   = "A Quantitative Description of Membrane Current and
                   and its Application to Conduction and Excitation in Nerve",
        JOURNAL = jphsl,
        VOLUME  =  117,
        PAGES   = "500-544",
        YEAR    =  1952}

2.	author  = "B. Frankenhaeuser",
	title   = "Quantitative Description of Sodium Currents in the
                   Myelinated Nerve Fibers of {Xenopus Laevis}",
	journal = "J. Physiol.",
	volume  = "151",
	pages   = "491-501",
	year    = "1960"

3.	AUTHOR  = "D. Noble",
        TITLE   = "A Description of Cardiac Pacemaker Potentials based on the
                   {Hodgkin-Huxley} Equations",
        JOURNAL = jphsl,
        VOLUME  = 154,
        PAGES   = "64P-65P",
        YEAR    = 1960}

3a.	AUTHOR  = "Denis Noble",
        TITLE   = "Cardiac Action and Pacemaker Potentials Based on the
                   {H}odgkin-{H}uxley Equations",
        JOURNAL = "Nature",
        VOLUME  = 4749,
        PAGES   = "495-497",
        MONTH   = "November",
        YEAR    = 1960}

3b.	AUTHOR  = "Denis Noble",
                   to {P}urkinje Fibre Action and Pace-maker Potentials",
        JOURNAL = jphsl,
        VOLUME  = 160,
        PAGES   = "317-352",
        YEAR    = 1962}

4.	author  = "B. Frankenhaeuser and A. F. Huxley",
	title   = "The Action Potential in the Myelinated Nerve Fibre of
	           Xenopus Laevis as Computed on the Basis of Voltage
	           Clamp Data",
	journal = "J. Physiol.",
	volume  = "171",
	pages   = "302-315",
	year    = "1964"

5.	AUTHOR  = "Denis Noble and R. W. Tsien",
        TITLE   = "Reconstruction of the Repolarization Process in
                   Cardiac {P}urkinje Fibres Based on
                   Voltage Clamp Measurements of Membrane Current",
        JOURNAL = jphsl,
        VOLUME  = 200,
        PAGES   = "205-231",
        YEAR    = 1969}

6.	AUTHOR = "Richard FitzHugh",
        TITLE = "Mathematical Models of Excitation and Propagation in Nerve",
        CHAPTER   = 1,
        PAGES     = "1-85",
        BOOKTITLE = "Biological Engineering",
        EDITOR    = "H. P. Schwan",
        PUBLISHER = "McGraw-Hill Book Co. Inc.",
        ADDRESS   = "New York",
        YEAR = 1969}

7.	AUTHOR  = "Ildefonse and Rougier"
	TITLE   = 
	JOURNAL = jphsl
	VOLUME  = 222,
	PAGES   = "373-395",
	YEAR    = 1972}

8.	AUTHOR  = "Adrian and Peachey",
	TITLE   =
	JOURNAL	= jphsl,
	VOLUME	= 235,
	PAGES	= "103-131",
	YEAR	= 197?}

9.	AUTHOR  = "R. E. McAllister and D. Noble and R. W. Tsien",
        TITLE   = "Reconstruction of the Electrical Activity of Cardiac
                   {P}urkinje Fibres",
        JOURNAL = jphsl,
        VOLUME  = 251,
        PAGES   = "1-59",
        YEAR    = 1975}

10.	AUTHOR  = "G. W. Beeler and H. Reuter",
        TITLE   = "Reconstruction of the Action Potential of Ventricular
                   Myocardial Fibres",
        JOURNAL = jphsl,
        VOLUME  = 268,
        PAGES   = "177-210",
        COMMENT = "The classic  model of ventricular cells -- it was an
                   8-dimensional ODE (voltage, [Ca]i and 6 gating variables)",
        YEAR    = 1977}

11.	AUTHOR  = "Kaoru Yanagihara and Akinori Noma and Hiroshi Irisawa",
        TITLE   = "Reconstruction of Sino-Atrial Node Pacemaker Potential
                   Based on the Voltage Clamp Experiments",
        JOURNAL = "Japanese Journal of Physiology",
        VOLUME  = 30,
        PAGES   = "841-857",
        YEAR    = 1980}

12.	AUTHOR  = "L. Ebihara and E. A. Johnson",
        TITLE   = "Fast Sodium Current in Cardiac Muscle: A Quantitative
                   Description",
        JOURNAL = biophys,
        VOLUME  = 32,
        PAGES   = "779-790",
        YEAR    = 1980}

13.	AUTHOR  = "David G. Bristow and John W. Clark",
        TITLE   = "A Mathematical Model of Primary Pacemaking Cell in SA Node
                   of the Heart",
        JOURNAL = amjphsl,
        VOLUME  = 243,
        PAGES   = "H207-H218",
        YEAR    = 1982}

14.      AUTHOR = "Teresa Ree Chay and Joel Keizer",
        TITLE = "Minimal Model for Membrane Oscillations in the
                 Pancreatic $\beta$-Cell",
        JOURNAL = biophys,
        VOLUME = 42,
        PAGES = "181-190",
        MONTH = "May",
        YEAR = 1983}

15.	AUTHOR  = "D. Noble and S. Noble",
        TITLE   = "A model of sino-atrial node electrical activity based on a
                   modification of the DiFrancesco-Noble (1984) equations",
        JOURNAL = proysb,
        VOLUME  = 222,
        PAGES   = "295-304",
        YEAR    = 1984}

16.	AUTHOR  = "D. DiFrancesco and D. Noble",
        TITLE   = "A Model of Cardiac Electrical Activity Incorporating
                   Ionic Pumps and Concentration Changes",
        JOURNAL = "Phil. Trans. R. Soc. Lond. B.",
        VOLUME  =  307,
        PAGES   = "353-398",
        YEAR    = 1985}

17.	AUTHOR  = "Jean-Pierre Drouhard and Fernand A. Roberge",
        TITLE   = "Revised Formulation of the {H}odgkin-{H}uxley Representation
                   of the Sodium Current in Cardiac Cells.",
        JOURNAL = "Computers and Biomedical Research",
        VOLUME  = 20,
        PAGES   = "333-350",
        YEAR    = 1987}

18.	AUTHOR  = "D. Noble and D. DiFrancesco and J. Denyer",
        TITLE   = "Ionic Mechanisms in Normal and Abnormal Cardiac
                   Pacemaker Activity",
        BOOKTITLE = "Neuronal and Cellular Oscillators",
        EDITOR    = "J. W. Jacklet",
        PUBLISHER = "Marcel Dekker, Inc.",
        ADDRESS = "New York",
        YEAR    = 1989}

19.	AUTHOR  = "Matthew A. Wilson and James M. Bower",
	TITLE	= "The Simulation of Large-Scale Neural Networks",
	BOOKTITLE = "Methods in Neuronal Modeling: From Synapses to Networks",
	PUBLISHER = "MIT Press",
	ADDRESS = "Cambridge, MA",
	EDITOR  = "Christof Koch and Idan Segev",
	PAGES	= "291-333",
	YEAR	= 1989}

20.	AUTHOR  = "Y. E. Earm and D. Noble",
        TITLE   = "A model of the single atrial cell: relation between calcium
                   current and calcium release",
        JOURNAL = proysb,
        VOLUME  = "240",
        PAGES   = "83-96",
        YEAR    = 1990}

21.	AUTHOR  = {R.L. Rasmusson and J.W. Clark and W.R. Giles and K. Robinson
		   and R.B. Clark and E.F. Shibata and D.L. Campbell},
        JOURNAL = {American Journal of Physiology},
        PAGES   = {H370--H389},
        TITLE   = {A mathematical model of electrophysiological activity in a
		   bullfrog atrial cell},
        VOLUME  = {259},
        YEAR    = {1990},

22.	AUTHOR  = {R.L. Rasmusson and J.W. Clark and W.R. Giles and K. Robinson
		   and R.B. Clark and E.F. Shibata and D.L. Campbell},
        JOURNAL = {American Journal of Physiology},
        PAGES   = {H352--H369},
        TITLE   = {A mathematical model of a bullfrog cardiac pacemaker cell},
        VOLUME  = 259,
        YEAR    = 1990}

23.	AUTHOR  = {C. C. Canavier and J. W. Clark and J. H. Byrne},
        TITLE   = {Routes to chaos in a model of a bursting neuron},
        JOURNAL = {Biophysical Journal},
        PAGES   = {1245--1251},
        VOLUME  = 57,
        YEAR    = 1990}

24.	AUTHOR  = "Roger D. Traub and Robert K. S. Wong and Richard Miles and
                   Hillary Michelson",
        TITLE   = "A Model of a CA3 Hippocampal Pyramidal Neuron Incorporating
                   Voltage-Clamp Data on Intrinsic Conductances",
        JOURNAL = "Journal of Neurophysiology",
        VOLUME  = 66,
        NUMBER  = 2,
        PAGES   = "635-650",
        YEAR    = 1991}

25.	AUTHOR  = "Orjan Ekeberg and Peter Wallen and Anders Lansner and
                   Hans G. C. Traven and Lennart Brodin and Sten Grillner",
        TITLE   = "A Computer Based Model for Realistic Simulations of
                   Neural Networks. I. The Single Neuron and Synaptic
                   Interaction",
        JOURNAL = biocyb,
        VOLUME  = 65,
        PAGES   = "81-90",
        YEAR	= 1991}

26.	AUTHOR  = "C. R. Murphey and J. W. Clark and W. R. Giles and
                   R. L.Rasmusson and J. A. Halter and K. Hicks and B. Hoyt",
        TITLE   = "Conduction in Bullfrog Atrial Strands: Simulations of the
                   Role of Disc and Extracellular Resistance",
        JOURNAL = "Mathematical Biosciences",
        VOLUME  = 106,
        PAGES   = "39-84",
        YEAR    = 1991}

27.	AUTHOR  = "{Ching-Hsing} Luo and Yoram Rudy",
        TITLE   = "A Model of the Ventricular Cardiac Action Potential",
        JOURNAL = circres,
        VOLUME  = 68,
        PAGES   = "1501-1526",
        YEAR    = 1991}

28.	AUTHOR  = "John R. Huguenard and David A. McCormick",
	TITLE	= "Simulation of the Currents Involved in Rhythmic Oscillations
		   in Thalamic Relay Neurons",
	JOURNAL = "Journal of Neurophysiology",
	VOLUME  = 68,
	NUMBER  = 4,
	PAGES	= "1373-1383",
	YEAR    = 1992}

29.	AUTHOR  = "David A. McCormick and John R. Huguenard",
	TITLE	= "A Model of the Electrophysiological Properties of 
		   Thalamocortical Relay Neurons",
	JOURNAL = "Journal of Neurophysiology",
	VOLUME  = 68,
	NUMBER  = 4,
	PAGES	= "1384-1400",
	YEAR    = 1992}

30.	AUTHOR  = "J. H. Schild and S. Khushalani and J. W. Clark and
		   M. C. Andersen and D. L. Kunze",
	TITLE   = "An ionic current model for neurons in the rat medial nucleus
		   tractus solitarii receiving sensory afferent input",
	JOURNAL = jphsl,
	VOLUME  = 469,
	PAGES   = 341,
	YEAR    = 1993}

Thanks to the following people for replying to my original post with
pointers to models:
		Rob Butera
		JACQUES BRISSON
		Alain Destexhe
		Frank Evans
		Matt Fishler
		John Huguenard
		Mark A. Lubinski
		W A  Noe

I would appreciate it very much of readers could look this list over and
tell me what models I've missed. I'm sure there must be a few more out there.

Tony Varghese

.