>CIVCG#1\X52154\827..2353\1527\g58867\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g58867"/db_xref="SWISS-PROT:P17282" 0 3 4 1 18 7 12 5 5 2 12 4 10 4 0 2 9 10 9 6 1 8 16 8 2 5 13 11 3 12 20 7 18 6 12 1 9 8 23 10 7 12 17 17 2 9 20 18 8 8 3 6 4 8 4 8 6 5 5 15 10 1 0 0 >CIVCG#2\X52154\5102..5683\582\g58869\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g58869"/db_xref="SWISS-PROT:P17284" 0 0 0 1 11 8 2 0 0 2 9 2 2 2 0 4 1 2 4 3 0 2 3 1 0 5 3 5 1 3 5 1 2 1 3 4 4 2 7 4 3 3 4 6 6 7 6 3 1 6 2 7 1 1 3 3 5 2 4 3 8 0 1 0 >CIVCG#3\X52154\5623..5913\291\g58870\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g58870"/db_xref="SWISS-PROT:P17287" 0 0 0 0 10 0 0 1 1 1 4 3 0 3 0 0 1 0 1 1 0 1 5 0 0 2 3 1 0 0 4 1 1 1 3 0 0 0 1 0 0 3 6 2 1 4 6 3 2 1 1 2 1 0 2 2 2 4 1 1 3 0 0 1 >CIVCG#4\X52154\join(5894..6111,8419..8503)\303\g763084\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g763084"/db_xref="SWISS-PROT:P17285" 2 1 0 0 3 1 0 0 1 0 2 0 0 3 2 1 1 2 4 1 2 0 4 2 0 2 2 0 1 2 1 5 1 0 0 0 1 1 6 6 1 4 2 3 2 0 2 3 1 4 0 4 3 4 1 0 3 1 0 1 1 0 0 1 >CIVCG#5\X52154\join(6033..6111,8419..8714)\375\g763085\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g763085"/db_xref="SWISS-PROT:P17280" 4 0 2 0 3 4 2 1 3 3 0 2 2 0 0 1 3 3 3 0 1 5 3 1 1 5 4 1 0 4 6 0 5 0 1 0 3 1 4 4 1 4 4 5 0 0 1 6 4 1 1 3 0 1 0 0 2 2 2 1 1 0 1 0 >CIVCG#6\X52154\6120..6386\267\g58873\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g58873"/db_xref="SWISS-PROT:P17286" 0 0 0 0 6 2 1 2 2 3 4 1 0 0 0 0 0 2 1 0 0 1 0 1 0 0 2 0 0 1 4 2 0 0 1 1 0 1 2 0 4 5 0 1 0 4 8 3 1 1 2 2 0 1 0 2 3 1 5 2 3 0 0 1 >CIVCG#7\X52154\6292..8856\2565\g58874\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g58874"/db_xref="SWISS-PROT:P17281" 5 1 1 0 30 11 14 12 20 13 15 15 16 3 2 9 12 12 34 11 6 13 14 2 2 14 26 11 1 13 31 6 13 8 27 6 18 8 26 16 25 31 19 26 3 11 22 17 16 16 5 14 9 15 6 17 28 11 27 13 26 1 0 0 >CIVCG#8\X52154\8870..9487\618\g58877\Simian immunodeficiency virus\Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome./codon_start=1/db_xref="PID:g58877"/db_xref="SWISS-PROT:P17664" 0 1 0 0 11 4 4 2 5 2 3 2 1 1 1 1 1 3 6 2 1 4 8 2 1 2 3 3 0 4 11 1 3 0 5 4 1 3 7 2 4 3 5 4 3 4 12 10 7 3 4 2 2 2 5 4 2 2 1 4 7 0 0 1 >RESIVMXX#1\Y00277 M16403\551..2071\1521\g61731\Simian immunodeficiency virus\Simian immunodeficiency virus STLV-III(MAC) proviral genome./codon_start=1/db_xref="PID:g61731"/db_xref="SWISS-PROT:P05894" 1 1 0 0 20 4 7 4 12 4 13 7 6 1 1 2 6 3 12 2 3 6 25 7 2 3 19 7 4 9 21 9 9 4 11 5 10 1 20 19 10 14 20 18 8 4 22 12 6 10 7 5 7 7 2 8 6 6 9 15 10 0 1 0 >RESIVMXX#2\Y00277 M16403\1726..4893\3168\g1335590\Simian immunodeficiency virus\Simian immunodeficiency virus STLV-III(MAC) proviral genome./codon_start=1/db_xref="PID:e9846"/db_xref="PID:g1335590"/db_xref="SWISS-PROT:P05896" 1 0 1 0 24 19 17 6 11 3 30 14 16 3 2 6 6 12 29 15 2 13 29 14 5 10 38 7 0 17 46 6 20 10 36 9 12 14 56 35 10 28 34 27 10 17 65 22 21 25 9 18 4 9 11 23 44 12 20 25 28 0 0 0 >RESIVMXX#3\Y00277 M16403\4826..5470\645\g61733\Simian immunodeficiency virus\Simian immunodeficiency virus STLV-III(MAC) proviral genome./codon_start=1/db_xref="PID:g61733"/db_xref="SWISS-PROT:P05903" 2 0 0 0 12 8 4 2 5 1 3 4 1 1 0 1 5 4 5 4 0 3 7 3 1 2 6 1 1 4 8 1 2 2 7 3 4 1 8 6 1 4 2 7 1 7 7 6 2 4 2 7 5 0 3 3 5 2 1 1 12 0 0 1 >RESIVMXX#4\Y00277 M16403\5298..5636\339\g61734\Simian immunodeficiency virus\Simian immunodeficiency virus STLV-III(MAC) proviral genome./codon_start=1/db_xref="PID:g61734"/db_xref="SWISS-PROT:P05917" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 3 0 0 0 3 2 1 6 2 1 1 1 7 1 4 0 2 0 0 1 2 2 4 0 4 1 2 2 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >RESIVMXX#5\Y00277 M16403\5637..5942\306\g61735\Simian immunodeficiency virus\Simian immunodeficiency virus STLV-III(MAC) proviral genome./codon_start=1/db_xref="PID:g61735"/db_xref="SWISS-PROT:P05958" 1 0 1 0 6 1 2 4 2 3 1 0 1 1 0 1 3 0 0 2 0 1 3 1 1 4 2 0 1 1 5 3 1 1 1 0 1 1 2 1 0 4 3 0 0 5 10 2 1 2 0 1 1 0 2 1 2 3 1 2 2 1 0 0 >RESIVMXX#11\Y00277 M16403\8572..9360\789\g61740\Simian immunodeficiency virus\Simian immunodeficiency virus STLV-III(MAC) proviral genome./codon_start=1/db_xref="PID:g61740"/db_xref="SWISS-PROT:P05862" 1 0 2 1 13 4 7 3 3 2 6 4 4 6 1 2 3 2 1 0 0 5 9 2 1 2 6 3 1 4 10 6 6 1 3 0 2 4 10 10 1 5 4 5 2 3 12 14 5 13 9 5 0 1 1 4 8 3 4 6 7 0 0 1 >RESIVSMM#1\X14307\1049..2572\1524\g61742\Simian immunodeficiency virus\Simian immunodeficiency virus from sooty mangabey monkey (SIVsmm)proviral sequence./codon_start=1/db_xref="PID:g61742"/db_xref="SWISS-PROT:P12496" 0 1 1 0 20 8 8 4 10 4 15 6 5 1 0 2 4 4 13 1 1 7 23 9 2 5 21 6 3 7 19 9 7 7 13 5 10 4 21 17 10 15 24 12 5 5 21 15 4 14 6 6 6 8 2 7 4 3 11 16 10 0 1 0 >RESIVSMM#2\X14307\5328..5972\645\g61743\Simian immunodeficiency virus\Simian immunodeficiency virus from sooty mangabey monkey (SIVsmm)proviral sequence./codon_start=1/db_xref="PID:g61743"/db_xref="SWISS-PROT:P12505" 1 0 1 0 8 6 5 2 5 1 2 4 2 2 0 1 5 4 3 2 0 7 5 3 2 2 6 2 1 4 8 2 0 1 8 2 2 2 13 4 3 7 1 7 1 7 4 9 2 4 1 7 4 1 4 2 4 2 1 3 12 0 0 1 >RESIVSMM#3\X14307\5800..6138\339\g61744\Simian immunodeficiency virus\Simian immunodeficiency virus from sooty mangabey monkey (SIVsmm)proviral sequence./codon_start=1/db_xref="PID:g61744"/db_xref="SWISS-PROT:P12514" 1 0 0 0 3 6 3 0 2 0 1 2 2 1 0 0 1 1 4 0 0 0 2 2 1 6 4 1 0 1 7 0 4 0 2 0 1 1 3 2 3 1 0 2 1 3 8 4 0 2 3 1 3 1 2 1 3 1 1 3 5 1 0 0 >RESIVSMM#4\X14307\6140..6409\270\g61745\Simian immunodeficiency virus\Simian immunodeficiency virus from sooty mangabey monkey (SIVsmm)proviral sequence./codon_start=1/db_xref="PID:g61745"/db_xref="SWISS-PROT:P12521" 0 1 0 0 7 1 3 2 2 2 1 1 0 1 0 1 0 1 0 1 0 1 3 0 0 2 3 3 1 0 4 2 0 1 1 0 2 1 2 0 1 0 1 2 1 3 11 1 1 4 0 2 0 1 2 1 0 3 2 1 2 1 0 0 >RESIVSMM#5\X14307\6551..9208\2658\g61746\Simian immunodeficiency virus\Simian immunodeficiency virus from sooty mangabey monkey (SIVsmm)proviral sequence./codon_start=1/db_xref="PID:g61746"/db_xref="SWISS-PROT:P12492" 4 4 1 1 28 18 11 14 9 9 13 26 9 6 2 7 10 11 31 12 6 24 17 7 2 9 23 5 10 12 19 11 11 13 18 13 13 10 22 19 8 45 28 24 3 8 34 22 11 18 9 24 7 21 11 14 25 16 15 16 36 0 0 1 >RESIVSMM#6\X14307\9042..9971\930\g61747\Simian immunodeficiency virus\Simian immunodeficiency virus from sooty mangabey monkey (SIVsmm)proviral sequence./codon_start=1/db_xref="PID:g61747"/db_xref="SWISS-PROT:P12482" 0 4 0 2 12 6 2 5 8 2 7 7 8 2 1 4 3 3 8 2 0 3 8 3 1 2 11 1 2 4 7 6 10 5 5 4 3 0 7 12 3 4 7 5 3 4 15 14 4 13 8 9 1 2 2 5 7 0 5 7 11 0 0 1 >RESIVXX#1\X07805\432..1991\1560\g61749\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="gag polyprotein"/db_xref="PID:g61749"/db_xref="SWISS-PROT:P05892" 1 4 3 0 11 8 14 6 4 6 9 6 8 1 1 2 3 5 10 9 1 2 15 11 8 5 22 6 6 5 22 9 10 2 15 4 9 0 28 15 5 17 25 13 5 6 21 17 10 7 7 8 6 9 3 9 7 5 8 16 9 1 0 0 >RESIVXX#2\X07805\1634..4816\3183\g1335593\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="pol polyprotein"/db_xref="PID:e36480"/db_xref="PID:g1335593"/db_xref="SWISS-PROT:P05895" 2 3 3 0 31 10 14 6 7 8 37 16 8 11 0 8 7 8 36 19 2 8 21 15 4 19 38 8 2 13 48 6 20 10 26 11 17 8 66 30 13 29 44 19 7 10 65 26 17 21 14 19 8 7 7 14 51 5 29 15 35 0 0 0 >RESIVXX#3\X07805\4755..5462\708\g61751\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="sor (Q orf)"/db_xref="PID:g61751"/db_xref="SWISS-PROT:P05904" 0 0 0 0 15 5 5 2 4 0 4 3 1 3 0 4 2 4 8 2 1 2 8 0 0 2 4 2 0 6 11 5 3 2 7 2 2 2 7 7 3 5 10 5 2 7 6 5 2 3 4 10 0 3 1 5 9 1 1 7 11 0 1 0 >RESIVXX#4\X07805\5236..5595\360\g61752\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="X orf"/db_xref="PID:g61752"/db_xref="SWISS-PROT:P05918" 1 0 0 1 9 7 3 3 2 1 1 0 1 0 0 0 1 0 0 0 0 1 5 2 1 0 2 2 1 1 5 1 4 1 3 1 1 0 2 1 2 1 4 3 0 3 7 7 1 5 3 2 1 2 1 4 0 0 1 4 4 0 0 1 >RESIVXX#5\X07805\join(5546..5763,7984..8068)\303\g61753\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="tat-III"/db_xref="PID:g61753"/db_xref="SWISS-PROT:P05913" 0 0 0 1 2 2 1 0 2 2 1 2 1 3 1 0 1 1 3 3 2 1 0 0 1 3 2 1 0 1 2 2 1 1 0 0 2 1 5 6 0 3 3 7 3 1 1 4 4 0 1 2 2 5 0 2 1 1 1 1 1 0 1 0 >RESIVXX#6\X07805\join(5703..5763,7984..8177)\255\g61754\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="art/trs"/db_xref="PID:g61754"/db_xref="SWISS-PROT:P05876" 2 3 0 0 7 2 1 2 1 1 1 3 1 0 0 0 1 1 0 1 1 0 4 1 0 3 1 2 0 4 1 0 2 0 1 1 1 2 0 0 0 1 6 4 1 1 4 2 3 1 1 2 0 0 1 0 1 0 2 1 2 0 1 0 >RESIVXX#8\X07805\8201..8890\690\g61755\Simian immunodeficiency virus\Simian immunodeficiency virus genome (SIV-AGM) (circularreplicative intermediate DNA)./codon_start=1/product="3' orf (F orf)"/db_xref="PID:g61755"/db_xref="SWISS-PROT:P05863" 0 0 1 0 6 7 2 1 4 5 4 5 2 3 5 0 1 0 3 2 2 2 6 2 2 2 4 2 3 1 9 3 4 1 1 3 7 0 9 9 2 6 5 4 3 6 12 7 5 11 4 4 4 1 2 7 4 3 3 6 7 0 1 0 >SIU04005#1\U04005\1017..2681\1665\g466230\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="GAG polyprotein"/db_xref="PID:g466230" 2 0 3 1 14 9 9 8 8 6 12 2 5 3 2 3 8 8 17 5 0 4 17 11 5 11 20 6 7 13 12 9 13 7 11 8 9 6 24 18 9 21 19 20 6 3 21 13 9 12 7 6 4 8 5 9 5 8 10 12 11 0 0 1 >SIU04005#3\U04005\5439..6143\705\g466232\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="VIF protein"/db_xref="PID:g466232" 2 0 1 0 9 9 2 2 1 4 4 1 1 7 0 2 2 2 7 6 1 3 5 6 2 4 2 3 1 5 12 3 2 0 3 3 6 4 7 5 1 3 7 8 2 10 8 3 1 4 3 9 0 4 2 4 5 1 2 5 13 0 0 1 >SIU04005#4\U04005\5911..6333\423\g466235\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="VPX protein"/db_xref="PID:g466235" 1 0 0 1 4 2 1 4 4 2 2 1 3 0 1 0 0 0 1 1 0 1 9 6 2 2 2 4 1 4 10 3 3 2 1 0 2 0 2 5 0 4 2 2 2 2 6 3 3 4 0 3 1 3 3 1 1 0 3 3 7 0 0 1 >SIU04005#5\U04005\6254..6475\222\g466233\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="TAT protein"/db_xref="PID:g466233" 0 2 1 0 2 1 2 2 1 1 0 0 0 0 1 2 0 0 0 0 0 1 1 1 1 1 0 3 0 1 0 1 0 0 0 2 0 2 2 3 1 2 1 5 1 4 0 6 1 1 0 2 5 2 2 1 0 0 3 1 1 0 1 0 >SIU04005#6\U04005\join(6411..6474,8683..8918)\300\g466234\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="REV protein"/db_xref="PID:g466234" 1 1 1 0 7 1 2 2 1 3 0 3 2 1 1 1 1 0 5 0 0 1 5 0 0 4 2 1 0 3 2 1 1 0 0 1 1 1 1 1 2 2 4 9 2 1 2 4 2 1 1 1 0 0 0 3 2 1 2 1 1 0 0 1 >SIU04005#7\U04005\6481..8679\2199\g466236\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="ENV protein"/db_xref="PID:g466236" 0 3 2 0 17 15 11 9 6 9 10 14 14 4 2 8 4 10 25 9 6 12 15 9 0 6 19 9 4 18 20 8 4 8 23 7 14 7 27 20 20 32 16 18 4 7 29 12 7 17 7 21 6 19 10 17 15 13 11 14 29 1 0 0 >SIU04005#8\U04005\8921..9601\681\g466237\Simian immunodeficiency virus\Simian immunodeficiency virus SIVagmSAB-1 complete sequence./codon_start=1/product="NEF protein"/db_xref="PID:g466237" 2 0 0 1 4 5 3 1 10 2 4 4 5 2 2 1 2 2 3 2 0 0 8 1 1 3 5 3 1 4 5 5 4 4 5 0 6 1 5 11 1 3 6 8 5 2 10 8 7 8 3 7 5 0 0 6 2 2 3 4 9 1 0 0 >SIU04982#2\U04982\join(420..718,2948..3044)\396\g451595\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62A vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/number=1/number=2/db_xref="PID:g451595" 1 2 0 0 4 3 4 1 1 4 1 1 4 4 1 1 0 0 3 0 0 3 3 2 1 2 4 2 0 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04982#3\U04982\join(655..718,2948..3186)\303\g451596\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62A vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451596" 1 0 0 0 7 5 3 2 2 1 0 4 1 0 1 1 2 2 1 3 1 0 6 1 1 3 2 2 0 5 2 0 1 0 0 0 0 0 1 1 2 2 3 6 1 1 3 3 2 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04982#4\U04982\725..3385\2661\g451593\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62A vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451593" 5 4 1 1 30 17 13 14 10 6 13 23 11 6 2 7 10 12 31 14 6 24 17 6 3 9 21 4 11 12 19 11 10 13 22 12 13 11 24 18 7 43 25 26 5 7 33 23 10 18 9 24 6 22 11 16 23 14 16 16 36 0 0 1 >SIU04982#5\U04982\3219..4010\792\g451594\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62A vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/number=1/number=2/db_xref="PID:g451594" 1 1 0 2 10 5 2 4 3 1 6 6 7 2 1 2 3 2 4 2 0 2 8 3 0 2 10 2 1 3 8 5 6 6 4 4 3 0 7 11 3 3 5 5 0 6 14 12 5 12 9 8 1 1 0 5 5 0 3 9 8 0 0 1 >SIU04983#2\U04983\join(420..718,2942..3038)\396\g451601\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62B vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451601" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 4 0 0 3 3 2 1 2 3 2 0 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04983#3\U04983\join(655..718,2942..3180)\303\g451602\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62B vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451602" 1 0 0 0 7 5 3 2 2 1 0 4 1 0 0 0 2 2 1 3 1 0 6 1 2 4 2 2 0 4 2 0 1 0 0 0 0 1 1 1 2 2 3 6 1 1 3 2 3 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04983#4\U04983\725..3379\2655\g451599\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62B vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451599" 5 4 1 1 31 17 13 14 10 6 13 24 10 6 3 7 10 10 32 14 5 24 18 7 3 9 20 4 10 12 20 11 11 13 21 12 13 10 23 17 8 43 25 27 3 7 33 23 10 17 9 25 6 21 11 16 22 15 16 17 36 0 0 1 >SIU04983#5\U04983\3213..4004\792\g451600\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62B vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451600" 1 1 0 2 10 5 2 4 3 1 7 6 6 2 1 2 3 2 5 2 0 1 7 3 1 2 9 2 1 3 8 5 6 6 4 4 3 0 7 11 2 4 5 5 1 4 16 11 5 11 8 10 1 1 0 5 5 0 4 9 8 0 0 1 >SIU04984#2\U04984\join(420..718,2945..3041)\396\g451607\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62C vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451607" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 5 0 1 3 3 2 1 2 2 2 0 1 1 2 0 1 0 0 4 0 2 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04984#3\U04984\join(655..718,2945..3183)\303\g451608\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62C vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451608" 1 0 1 0 8 4 3 2 2 1 0 4 1 0 1 0 2 2 1 3 1 0 6 1 1 4 2 2 0 4 2 0 1 0 0 0 1 0 0 1 2 2 4 5 1 1 3 2 3 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04984#4\U04984\725..3382\2658\g451605\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62C vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451605" 5 4 1 1 31 18 11 15 9 8 14 23 10 6 2 7 8 10 32 15 6 23 18 6 3 10 21 4 9 12 19 11 11 13 20 13 15 9 22 18 9 44 25 27 3 7 32 22 11 18 9 25 7 20 11 16 23 14 16 16 37 0 0 1 >SIU04984#5\U04984\3216..4007\792\g451606\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62C vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451606" 1 1 0 2 9 5 2 4 3 0 7 6 6 2 1 2 3 2 5 2 0 1 7 3 1 2 8 2 2 3 8 6 6 5 4 4 3 0 7 12 2 5 5 5 1 5 16 10 5 11 9 7 1 1 0 5 5 0 6 9 8 0 0 1 >SIU04985#2\U04985\join(420..718,2948..3044)\396\g451613\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62J vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451613" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 4 0 0 3 3 2 1 2 3 2 0 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04985#3\U04985\join(655..718,2948..3186)\303\g451614\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62J vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451614" 1 0 0 0 7 5 3 2 2 1 0 4 1 0 0 0 2 2 1 3 1 1 6 1 2 4 2 2 0 3 2 0 1 0 0 0 0 1 1 1 2 1 3 6 1 1 3 2 3 4 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04985#4\U04985\725..3385\2661\g451611\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62J vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451611" 4 3 1 2 29 20 11 14 10 7 13 24 11 7 2 7 12 9 32 15 6 23 18 6 2 10 22 4 10 13 21 10 10 13 20 14 14 9 24 18 8 41 28 26 3 7 31 22 10 19 9 24 6 22 12 15 22 14 15 16 36 0 0 1 >SIU04985#5\U04985\3219..4010\792\g451612\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62J vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451612" 0 1 0 2 10 5 2 4 3 1 7 6 6 2 1 2 3 2 5 2 0 1 7 3 1 2 7 2 3 2 7 7 5 6 4 4 3 1 9 11 2 3 5 6 2 5 14 11 5 12 8 8 1 1 0 5 5 0 4 9 8 0 0 1 >SIU04986#2\U04986\join(420..718,2951..3047)\396\g451619\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62G vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451619" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 3 0 0 3 3 2 2 2 3 2 0 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 3 5 4 1 2 2 1 1 2 0 0 1 0 >SIU04986#3\U04986\join(655..718,2951..3189)\303\g451620\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62G vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451620" 1 0 0 0 7 5 3 2 1 1 0 5 1 0 0 0 2 2 1 3 1 1 6 1 2 4 2 2 0 3 2 0 1 0 0 0 0 1 1 1 2 1 3 6 1 1 3 2 4 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04986#4\U04986\725..3388\2664\g451617\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62G vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451617" 4 3 1 2 29 21 11 15 10 7 14 24 11 6 2 7 11 10 31 13 6 25 19 6 2 9 21 4 11 14 21 10 10 13 20 13 13 9 22 16 7 43 27 27 3 8 32 23 10 18 9 25 6 21 11 15 24 16 14 16 36 0 0 1 >SIU04986#5\U04986\3222..4013\792\g451618\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62G vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451618" 1 1 0 2 9 5 2 4 3 1 6 6 7 2 1 2 3 2 5 2 0 1 7 3 1 2 9 2 1 2 7 7 6 5 4 4 3 1 9 11 3 4 5 5 3 5 13 12 4 12 7 9 1 1 0 4 5 0 4 9 8 0 0 1 >SIU04987#2\U04987\join(420..718,2951..3047)\396\g451625\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62D vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451625" 1 2 0 0 3 2 4 1 0 4 1 2 4 4 1 1 0 0 4 0 1 3 3 2 1 2 3 2 0 1 1 2 1 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04987#3\U04987\join(655..718,2951..3189)\303\g451626\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62D vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451626" 1 0 1 0 8 4 3 2 2 1 0 4 1 0 0 0 2 2 1 2 1 0 5 1 3 4 2 3 0 4 2 0 1 0 0 0 0 1 1 1 2 2 4 5 1 1 2 3 2 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04987#4\U04987\725..3388\2664\g451623\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62D vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451623" 4 4 3 1 30 20 12 15 9 7 14 24 11 6 2 7 13 9 31 13 6 24 19 6 2 10 19 4 12 11 20 10 10 13 21 12 13 10 21 17 7 43 27 26 3 8 32 23 11 18 9 25 7 20 11 15 24 17 15 16 35 0 0 1 >SIU04987#5\U04987\3222..4013\792\g451624\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62D vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451624" 1 1 0 2 9 5 2 4 3 1 7 6 6 2 1 2 3 2 5 2 0 1 7 3 1 2 9 2 1 3 8 6 5 5 4 4 3 0 9 11 3 4 5 5 1 4 15 11 4 12 9 9 1 1 0 5 5 0 4 9 8 0 0 1 >SIU04988#2\U04988\join(420..718,2951..3047)\396\g451631\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62H vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451631" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 3 0 0 3 3 2 1 2 4 2 0 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04988#3\U04988\join(655..718,2951..3189)\303\g451632\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62H vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451632" 1 0 0 0 7 5 3 2 2 1 0 4 1 0 1 1 2 2 1 3 1 0 6 1 1 3 2 2 0 5 2 0 1 0 0 0 0 0 1 1 2 2 3 6 1 1 3 3 2 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04988#4\U04988\725..3388\2664\g451629\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62H vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451629" 4 4 1 1 31 18 12 13 10 7 14 23 11 6 2 7 10 11 31 14 6 23 19 8 2 9 20 4 11 13 20 11 10 13 20 13 14 10 22 18 8 43 26 26 3 8 33 22 11 17 9 25 7 20 12 15 24 13 16 16 37 0 0 1 >SIU04988#5\U04988\3222..4013\792\g451630\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62H vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451630" 1 1 1 2 10 5 2 3 3 2 6 6 7 2 1 2 3 2 5 2 0 2 8 3 0 2 7 2 2 3 9 6 6 5 4 4 3 0 7 11 2 4 5 5 0 6 14 12 5 12 9 8 1 1 0 5 5 0 3 9 7 0 0 1 >SIU04989#2\U04989\join(420..718,2951..3047)\396\g451636\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62K vpx gene, partial cds,nef, tat and rev genes, complete cds, and defective env gene./gene="tat"/codon_start=1/db_xref="PID:g451636" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 4 0 0 3 3 2 1 2 3 2 0 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04989#3\U04989\join(655..718,2951..3189)\303\g451637\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62K vpx gene, partial cds,nef, tat and rev genes, complete cds, and defective env gene./gene="rev"/codon_start=1/db_xref="PID:g451637" 1 0 0 0 7 5 3 2 2 1 0 4 1 0 1 0 2 2 1 3 1 1 6 1 1 4 2 2 0 4 2 0 1 0 0 0 0 0 1 1 2 2 3 6 1 1 3 2 3 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04989#4\U04989\3222..4013\792\g451635\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62K vpx gene, partial cds,nef, tat and rev genes, complete cds, and defective env gene./gene="nef"/codon_start=1/db_xref="PID:g451635" 1 1 0 2 10 6 2 4 3 1 7 6 6 2 1 2 3 2 5 2 0 1 7 3 1 2 9 2 1 3 9 5 5 6 4 4 3 0 7 11 2 4 5 5 1 5 14 11 5 12 9 8 1 1 0 5 5 0 4 9 8 0 0 1 >SIU04990#2\U04990\join(420..718,2951..3047)\396\g451641\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62L vpx gene, partial cds,nef, tat and rev genes, complete cds, and defective env gene./gene="tat"/codon_start=1/db_xref="PID:g451641" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 5 0 1 3 3 2 1 2 2 2 0 1 1 2 0 1 0 0 4 0 3 10 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04990#3\U04990\join(655..718,2951..3189)\303\g451642\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62L vpx gene, partial cds,nef, tat and rev genes, complete cds, and defective env gene./gene="rev"/codon_start=1/db_xref="PID:g451642" 1 0 1 0 7 4 3 2 2 1 0 4 1 0 1 0 2 2 1 2 1 0 5 1 2 4 2 3 0 4 2 0 1 0 0 0 1 0 1 1 2 2 4 5 1 1 3 2 3 3 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04990#4\U04990\3222..4013\792\g451640\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62L vpx gene, partial cds,nef, tat and rev genes, complete cds, and defective env gene./gene="nef"/codon_start=1/db_xref="PID:g451640" 2 1 0 2 10 4 1 4 3 0 7 6 6 2 1 2 3 2 5 2 0 1 7 3 1 2 9 2 1 3 8 5 6 6 4 4 3 0 7 12 2 4 5 5 1 4 15 11 4 13 9 8 1 1 0 5 5 0 6 9 8 0 0 1 >SIU04991#2\U04991\join(420..718,2963..3059)\396\g451647\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62F vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g451647" 1 2 0 0 4 3 4 1 0 4 1 2 4 4 1 1 0 0 3 0 0 3 3 2 1 2 3 2 1 1 1 2 0 1 0 0 4 0 3 11 4 2 2 3 2 2 4 12 1 2 1 4 5 4 1 1 2 1 1 2 0 0 1 0 >SIU04991#3\U04991\join(655..718,2963..3201)\303\g451648\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62F vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g451648" 1 0 1 0 7 5 3 2 2 1 0 4 1 0 0 0 2 2 1 3 1 1 6 1 2 4 2 2 0 3 2 0 1 0 0 0 0 1 1 1 2 1 3 5 1 1 3 2 3 4 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU04991#4\U04991\725..3400\2676\g451645\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62F vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="env"/codon_start=1/db_xref="PID:g451645" 5 3 2 2 29 17 12 14 10 7 14 24 12 6 2 7 10 12 33 14 7 23 17 7 2 9 21 4 11 14 21 10 12 13 20 13 14 10 23 17 8 42 27 26 3 7 36 20 10 18 9 26 6 21 10 15 23 15 15 16 35 0 0 1 >SIU04991#5\U04991\3234..4025\792\g451646\Simian immunodeficiency virus\Simian immunodeficiency virus clone SIVsm62F vpx gene, partial cds,env, nef, tat and rev genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g451646" 1 1 0 2 9 5 2 4 3 1 6 6 6 2 2 2 3 2 5 2 0 1 7 3 1 2 8 2 2 2 7 7 6 5 4 4 3 1 9 11 4 3 5 5 3 5 14 11 4 12 7 9 1 1 0 4 5 0 4 9 8 0 0 1 >SIU20811\U20811\1..681\681\g984329\Simian immunodeficiency virus\Simian immunodeficiency virus D30 Nef (nef) gene, complete cds./gene="nef"/codon_start=1/function="regulatory gene"/product="Nef"/db_xref="PID:g984329" 1 1 0 0 7 1 1 3 6 2 5 6 3 2 1 4 1 3 4 0 1 2 7 2 2 3 2 4 0 3 6 5 5 3 5 1 7 1 6 11 0 2 9 5 5 1 11 5 7 12 2 5 1 1 3 7 1 2 4 7 9 0 0 1 >SIU20812\U20812\1..216\216\g984331\Simian immunodeficiency virus\Simian immunodeficiency virus D30 Tat (tat) gene, complete cds./gene="tat"/codon_start=1/function="regulatory gene"/product="Tat"/db_xref="PID:g984331" 0 1 1 0 3 2 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 3 0 4 0 1 0 0 1 0 2 2 0 0 4 3 2 2 0 6 2 0 0 6 1 0 0 4 6 2 1 0 0 1 1 1 1 1 0 0 >SIU20813\U20813\1..681\681\g984333\Simian immunodeficiency virus\Simian immunodeficiency virus D42 Nef (nef) gene, complete cds./gene="nef"/codon_start=1/function="regulatory gene"/product="Nef"/db_xref="PID:g984333" 3 2 1 0 7 3 1 3 6 3 5 4 3 3 2 2 2 1 3 0 0 4 10 0 2 2 3 5 1 2 4 4 5 4 4 2 1 2 5 8 1 3 6 8 4 2 12 4 3 16 3 6 3 0 2 6 3 3 4 6 9 0 0 1 >SIU20814\U20814\1..222\222\g984335\Simian immunodeficiency virus\Simian immunodeficiency virus 89042 Tat (tat) gene, complete cds./gene="tat"/codon_start=1/function="regulatory gene"/product="Tat"/db_xref="PID:g984335" 0 1 3 0 2 1 1 3 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 1 1 2 0 3 0 0 0 2 0 0 2 2 1 1 2 3 1 5 1 5 2 1 1 4 1 0 1 2 7 1 0 2 0 0 2 1 1 1 0 0 >SIU20965\U20965\1..417\417\g984337\Simian immunodeficiency virus\Simian immunodeficiency virus D30 Vpr (vpr) gene, complete cds./gene="vpr"/codon_start=1/function="regulatory gene"/product="Vpr"/db_xref="PID:g984337" 0 0 1 1 3 5 2 4 3 2 2 1 1 0 0 1 0 0 3 0 0 0 10 2 2 5 2 3 1 4 11 4 1 2 1 0 2 1 2 3 0 4 3 3 3 0 3 6 5 3 2 3 2 0 3 1 0 0 2 3 7 0 0 1 >SIU20966\U20966\1..300\300\g984339\Simian immunodeficiency virus\Simian immunodeficiency virus D30 Rev (rev) gene, complete cds./gene="rev"/codon_start=1/function="regulatory gene"/product="Rev"/db_xref="PID:g984339" 0 0 1 0 10 0 3 1 3 2 0 4 2 2 0 0 2 0 2 1 0 1 5 0 0 5 2 2 0 3 2 0 1 1 0 0 1 1 2 2 2 2 4 8 1 1 4 3 2 0 2 1 0 0 1 0 2 1 2 1 1 0 0 1 >SIU20967\U20967\1..423\423\g984341\Simian immunodeficiency virus\Simian immunodeficiency virus D42 Vpr (vpr) gene, complete cds./gene="vpr"/codon_start=1/function="regulatory gene"/product="Vpr"/db_xref="PID:g984341" 0 1 0 1 5 2 2 4 3 3 0 1 1 0 1 0 0 0 1 0 0 2 11 3 1 5 2 3 2 4 9 1 4 4 0 0 2 0 5 2 2 2 3 2 1 2 4 5 5 2 2 3 3 0 3 0 3 1 1 4 7 1 0 0 >SIU20968\U20968\1..279\279\g984343\Simian immunodeficiency virus\Simian immunodeficiency virus D42 Rev (rev) gene, complete cds./gene="rev"/codon_start=1/function="regulatory gene"/product="Rev"/db_xref="PID:g984343" 1 0 0 0 9 1 2 0 3 1 0 2 1 2 0 1 1 2 3 0 0 1 4 0 0 3 3 2 0 1 2 0 1 0 0 0 3 0 0 1 0 2 5 9 2 0 2 2 3 2 2 1 0 1 1 1 3 1 3 1 1 0 0 1 >SIU42720#1\U42720\154..1722\1569\g1150852\Simian immunodeficiency virus\Simian immunodeficiency virus gag gene, complete cds, pol gene,partial cds, vif, vpr, tat, and vpu genes, complete cds, rev andenv genes, partial cds./gene="gag"/codon_start=1/db_xref="PID:g1150852"/IGNORED_CODON=1 1 0 2 1 17 8 5 5 10 6 11 6 4 7 2 4 6 5 19 7 1 4 15 7 1 8 18 8 3 10 24 8 11 4 10 5 10 5 24 15 6 17 12 19 4 10 24 16 4 8 2 6 6 8 3 8 11 11 3 14 12 0 0 1 >SIU42720#3\U42720\4711..5292\582\g1150854\Simian immunodeficiency virus\Simian immunodeficiency virus gag gene, complete cds, pol gene,partial cds, vif, vpr, tat, and vpu genes, complete cds, rev andenv genes, partial cds./gene="vif"/codon_start=1/db_xref="PID:g1150854" 0 2 0 0 9 4 3 0 2 1 5 3 1 1 1 1 1 2 7 0 0 2 7 3 0 1 3 0 0 3 8 2 1 2 6 3 5 0 7 8 2 2 8 3 7 5 9 2 2 5 3 6 1 4 4 2 5 6 1 4 8 0 0 1 >SIU42720#4\U42720\5247..5426\180\g1150855\Simian immunodeficiency virus\Simian immunodeficiency virus gag gene, complete cds, pol gene,partial cds, vif, vpr, tat, and vpu genes, complete cds, rev andenv genes, partial cds./gene="vpr"/codon_start=1/db_xref="PID:g1150855" 0 0 0 0 2 1 0 0 0 0 3 2 0 0 0 0 0 0 1 0 1 1 3 0 1 1 1 1 0 0 1 0 2 0 1 0 0 0 1 0 0 2 3 3 1 2 6 6 0 1 0 1 1 0 1 1 1 0 3 3 1 0 0 1 >SIU42720#5\U42720\join(5493..5710,8068..8113)\264\g1150856\Simian immunodeficiency virus\Simian immunodeficiency virus gag gene, complete cds, pol gene,partial cds, vif, vpr, tat, and vpu genes, complete cds, rev andenv genes, partial cds./gene="tat"/codon_start=1/db_xref="PID:g1150856" 2 0 0 0 3 3 1 1 0 0 1 1 1 2 0 0 4 1 4 1 1 1 3 2 0 5 1 0 0 4 0 2 1 0 2 0 0 0 6 2 2 3 1 2 1 1 3 0 2 1 2 1 4 4 1 0 0 1 1 1 1 1 0 0 >SIU42720#7\U42720\5727..5978\252\g1150858\Simian immunodeficiency virus\Simian immunodeficiency virus gag gene, complete cds, pol gene,partial cds, vif, vpr, tat, and vpu genes, complete cds, rev andenv genes, partial cds./gene="vpu"/codon_start=1/db_xref="PID:g1150858" 0 0 0 0 5 0 1 1 0 3 1 1 0 0 0 1 0 4 1 0 0 1 1 0 0 1 1 2 0 2 0 1 2 0 1 0 1 1 1 3 0 4 2 2 0 0 6 2 1 4 0 7 0 1 0 4 9 2 1 1 1 0 0 1 >SIU58991#1\U58991\902..2473\1572\g1890638\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="gag"/codon_start=1/product="Gag"/db_xref="PID:g1890638" 1 7 0 2 12 5 8 7 9 2 10 8 6 2 2 2 2 5 15 3 1 4 18 6 7 6 19 9 6 6 31 8 10 5 15 3 4 7 27 14 5 17 23 13 7 7 18 14 11 9 6 5 8 7 4 9 10 8 5 14 9 0 0 1 >SIU58991#3\U58991\5240..5956\717\g1890640\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="vif"/codon_start=1/product="Vif"/db_xref="PID:g1890640" 1 0 3 0 14 4 3 2 4 3 4 2 2 1 0 2 3 4 10 3 3 3 3 1 0 3 3 4 1 1 14 4 1 2 7 0 4 2 5 8 3 4 4 8 5 5 9 4 3 5 7 3 3 3 4 5 4 3 2 7 13 0 1 0 >SIU58991#4\U58991\5739..5822\84\g1890641\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="vpx"/codon_start=1/product="Vpx"/db_xref="PID:g1890641" 0 0 0 0 3 2 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 2 0 0 0 0 0 0 0 0 1 1 3 0 0 1 >SIU58991#5\U58991\join(6049..6260,8469..8562)\306\g1890642\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="tat"/codon_start=1/product="Tat"/db_xref="PID:g1890642" 0 2 0 0 3 2 0 2 1 1 2 1 3 1 1 1 2 1 4 1 1 1 2 0 0 3 4 1 0 0 1 2 3 0 1 1 0 1 2 5 2 3 2 7 1 4 0 6 2 0 0 2 5 2 0 2 1 2 1 2 1 0 0 1 >SIU58991#6\U58991\join(6197..6260,8469..8716)\312\g1890643\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="rev"/codon_start=1/product="Rev"/db_xref="PID:g1890643" 0 1 0 0 9 4 2 1 0 1 1 4 2 0 0 3 3 1 1 0 0 2 2 0 2 3 2 4 1 1 4 0 1 0 0 1 1 1 0 0 0 2 7 8 2 0 2 4 4 2 0 2 0 0 1 2 0 5 3 1 0 0 1 0 >SIU58991#7\U58991\6267..8906\2640\g1929499\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="env"/codon_start=1/product="Env"/db_xref="PID:g1929499" 3 4 4 1 23 16 7 10 10 11 20 21 12 4 1 10 18 14 30 13 7 23 19 5 2 7 23 7 8 16 26 5 10 11 14 8 18 8 30 18 18 40 17 28 4 8 27 22 10 19 8 25 14 16 12 15 21 11 13 17 37 0 1 0 >SIU58991#8\U58991\8740..9408\669\g1890645\Simian immunodeficiency virus\Simian immunodeficiency virus from African green monkey, tantalusspecies (SIVtan) proviral DNA, complete genome./gene="nef"/codon_start=1/product="Nef"/db_xref="PID:g1890645" 3 2 0 0 5 6 2 3 3 5 3 5 3 4 1 0 4 0 3 2 0 1 7 1 3 5 5 3 2 1 5 6 2 5 4 2 4 2 5 10 4 4 6 5 3 1 12 7 6 8 1 5 3 1 2 6 2 3 2 4 10 0 1 0 >SIU72748#1\U72748\1050..2573\1524\g1695909\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g1695909" 0 1 1 0 21 8 7 4 10 3 14 8 4 1 1 2 4 4 13 1 1 7 23 8 3 5 21 6 3 7 19 9 8 7 12 5 10 4 21 15 9 16 23 13 5 5 21 16 7 10 6 6 7 7 2 8 5 4 10 16 10 0 1 0 >SIU72748#3\U72748\5328..5972\645\g1695911\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="vif"/codon_start=1/db_xref="PID:g1695911" 1 0 0 0 10 6 5 2 5 1 2 4 2 2 0 1 5 4 3 2 0 7 5 3 2 2 7 2 0 4 8 2 0 1 8 2 2 2 11 4 3 7 2 7 1 8 4 9 2 4 1 5 5 1 4 2 4 2 1 3 12 0 0 1 >SIU72748#4\U72748\5800..6138\339\g1695912\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="vpx"/codon_start=1/db_xref="PID:g1695912" 0 0 0 0 4 5 3 0 2 0 1 2 2 1 0 0 1 1 4 0 0 0 2 2 1 6 4 1 0 1 7 0 5 0 2 0 0 1 3 1 3 1 1 2 1 3 8 4 0 2 3 1 2 1 2 1 3 2 1 4 5 1 0 0 >SIU72748#5\U72748\6140..6445\306\g1695913\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="vpr"/codon_start=1/db_xref="PID:g1695913" 0 1 0 0 8 1 3 3 2 2 0 1 1 1 0 2 0 1 0 1 0 2 3 1 1 3 3 4 1 0 6 1 0 1 1 0 1 1 2 0 1 1 1 2 1 3 11 1 1 4 0 2 0 1 2 1 2 3 2 2 2 1 0 0 >SIU72748#6\U72748\join(6282..6580,8810..8909)\399\g1695914\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g1695914" 1 2 0 0 5 3 4 1 0 4 1 2 4 4 1 2 0 0 3 1 0 4 4 2 1 2 3 1 0 0 1 2 0 1 0 0 4 0 2 11 5 2 2 3 2 2 4 12 1 2 3 3 4 4 0 1 2 1 1 2 0 0 1 0 >SIU72748#7\U72748\join(6517..6580,8810..9051)\306\g1695915\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g1695915" 1 0 0 0 8 4 3 2 2 1 0 4 1 0 1 0 2 2 2 3 1 2 6 1 1 3 2 2 0 4 3 0 0 0 0 0 0 0 1 2 1 1 3 6 1 1 3 2 2 5 0 2 0 0 1 1 1 2 2 1 2 0 0 1 >SIU72748#8\U72748\6587..9250\2664\g1695916\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g1695916" 4 3 2 1 30 19 14 13 10 8 13 23 11 4 3 9 8 9 34 14 4 23 18 8 2 9 19 4 11 13 23 9 10 13 20 13 13 11 20 21 8 44 27 24 3 8 30 24 13 19 9 23 6 22 11 15 23 16 15 16 35 0 0 1 >SIU72748#9\U72748\9084..9863\780\g1695917\Simian immunodeficiency virus\Simian immunodeficiency virus strain SIVsmE543, complete genome./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g1695917" 1 1 0 2 7 4 2 4 3 0 6 7 5 2 2 2 2 2 5 2 0 2 8 3 0 2 7 2 2 3 9 5 6 5 4 4 3 0 10 11 2 4 5 5 2 5 14 11 5 12 8 8 1 1 0 5 5 0 4 9 8 0 1 0 >SIU78790\U78790\1..360\360\g2198859\Simian immunodeficiency virus\Simian immunodeficiency virus Vpr (vpr) gene, complete cds./gene="vpr"/codon_start=1/product="Vpr"/db_xref="PID:g2198859" 1 1 0 2 12 2 3 4 1 2 0 0 1 0 0 0 1 0 1 0 0 0 4 3 0 1 2 1 0 2 8 1 2 0 1 2 1 1 1 1 0 4 5 4 1 1 4 12 2 3 1 4 0 3 2 3 0 0 1 3 4 0 0 1 >SIU78792\U78792\1..360\360\g2198861\Simian immunodeficiency virus\Simian immunodeficiency virus Vpr (vpr) gene, complete cds./gene="vpr"/codon_start=1/product="Vpr"/db_xref="PID:g2198861" 1 1 1 2 10 4 4 3 0 2 0 0 1 0 0 0 1 0 0 0 0 0 5 2 0 1 1 1 1 3 7 1 2 0 2 1 1 1 2 0 1 3 5 3 1 1 7 10 1 4 1 4 0 3 1 3 0 3 0 3 4 0 0 1 >SIU84094\U84094\1..2577\2577\g2149258\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant1, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149258"/IGNORED_CODON=7 0 2 0 1 26 14 14 14 10 8 12 14 10 7 1 2 10 9 46 9 7 17 15 1 1 15 18 10 7 10 26 6 7 7 29 10 10 8 29 16 18 35 31 21 7 14 27 15 12 15 8 15 9 20 14 14 34 13 22 19 30 1 0 0 >SIU84095\U84095\1..2625\2625\g2149260\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant2, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149260" 1 2 0 1 27 15 15 16 10 9 14 12 12 9 0 2 8 8 44 11 6 18 13 3 1 12 22 7 7 11 26 8 7 8 30 9 10 8 31 14 24 36 31 25 8 14 30 15 12 16 7 15 10 19 13 14 34 14 20 19 31 1 0 0 >SIU84096\U84096\1..2589\2589\g2149262\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant3, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149262" 0 3 0 1 26 16 16 14 10 9 14 12 10 7 1 2 9 9 40 14 7 17 13 1 1 13 22 7 7 10 24 7 7 7 31 10 12 7 29 15 21 38 32 21 8 14 28 14 14 15 7 15 8 21 14 14 34 13 20 20 31 1 0 0 >SIU84097\U84097\1..2601\2601\g2149264\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant4, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149264" 0 2 0 1 26 15 15 14 10 9 14 12 10 7 1 2 11 9 38 12 7 18 14 2 1 13 23 6 6 12 23 7 8 8 32 11 9 7 31 14 18 38 33 22 10 15 30 14 15 15 7 15 8 21 15 13 34 13 20 19 31 1 0 0 >SIU84098\U84098\1..2601\2601\g2149266\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant5, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149266" 0 3 0 2 28 15 15 14 10 9 14 12 10 6 1 3 11 8 44 10 8 17 12 1 1 13 24 6 5 11 24 8 7 9 32 10 9 7 28 15 19 37 33 21 7 13 33 14 13 17 8 16 9 20 13 14 34 13 20 19 31 1 0 0 >SIU84099\U84099\1..2592\2592\g2149268\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant6, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149268" 0 3 0 0 27 16 15 12 10 11 14 12 10 6 1 2 10 11 43 12 6 16 12 1 1 13 24 6 7 11 22 7 7 7 31 10 9 7 26 18 20 35 33 21 7 14 36 14 12 17 9 15 8 21 13 15 34 13 20 19 31 1 0 0 >SIU84100\U84100\1..2565\2565\g2149270\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant7, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149270" 0 2 0 0 26 15 15 14 11 10 14 11 10 6 1 2 10 10 42 11 7 17 12 1 1 13 23 6 6 11 24 7 8 7 31 10 11 7 27 18 18 36 34 20 7 14 34 12 12 15 8 15 8 21 14 13 34 13 20 18 31 1 0 0 >SIU84101\U84101\1..2607\2607\g2149272\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant8, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149272" 1 2 0 0 25 16 14 14 11 10 16 12 11 6 1 2 11 8 44 12 8 16 13 1 1 13 22 6 7 11 25 8 7 7 32 10 10 7 31 15 21 39 31 22 7 14 32 11 13 17 9 15 9 20 13 14 33 13 20 18 31 1 0 0 >SIU84102\U84102\1..2589\2589\g2149274\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant9, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149274" 0 2 0 0 25 16 17 15 10 10 14 12 11 6 1 2 10 10 39 12 8 16 14 1 1 13 25 6 7 12 25 6 7 7 32 10 9 7 28 13 23 36 32 22 8 14 32 13 12 17 9 15 8 21 12 14 32 13 20 19 31 1 0 0 >SIU84103\U84103\1..2613\2613\g2149276\Simian immunodeficiency virus\Simian immunodeficiency virus strain ant10, envelope glycoproteingp160 (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein gp160"/db_xref="PID:g2149276" 0 3 0 0 28 15 16 15 10 10 14 12 9 6 1 2 9 9 44 11 6 15 14 2 1 13 24 6 5 11 24 8 8 9 34 9 11 7 27 16 21 41 33 22 7 15 29 12 14 16 8 16 9 20 12 14 34 13 20 19 31 1 0 0 >SIU86638#2\U86638\247..891\645\g2062614\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g2062614" 1 0 0 0 10 10 5 2 5 1 3 3 1 1 0 2 5 4 5 4 0 3 5 4 2 1 7 1 1 3 8 2 2 1 6 3 3 2 9 5 2 3 3 7 0 5 6 6 3 5 2 8 5 0 3 4 5 2 1 2 12 0 0 1 >SIU86638#3\U86638\719..1057\339\g2062615\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g2062615" 0 0 0 0 6 3 4 0 1 0 2 1 2 0 0 1 1 1 2 0 0 0 4 2 0 6 3 1 0 1 9 1 2 0 3 0 0 1 2 2 4 0 3 2 1 3 5 7 0 2 3 1 1 3 2 1 2 1 1 4 5 1 0 0 >SIU86638#4\U86638\1058..1351\294\g2062616\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g2062616" 1 1 0 0 5 1 1 4 1 2 1 2 1 1 0 1 0 0 0 2 0 2 3 1 1 4 2 0 1 1 6 3 1 1 1 0 1 1 2 0 0 4 3 0 1 4 11 2 1 2 0 1 1 0 1 2 1 3 1 2 2 0 0 1 >SIU86638#5\U86638\join(1209..1504,3707..3806)\396\g2062617\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g2062617" 1 2 1 0 5 2 1 2 1 3 2 2 4 3 1 3 0 0 4 1 1 2 2 2 1 3 4 1 3 3 1 2 2 0 0 0 2 0 3 9 6 1 2 3 1 1 3 11 1 1 2 3 6 4 0 2 2 1 1 1 0 0 1 0 >SIU86638#6\U86638\join(1435..1504,3707..3963)\327\g2062618\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g2062618" 1 0 2 0 7 6 2 4 3 2 0 2 2 0 1 0 2 2 2 1 3 3 5 1 1 5 1 2 0 3 1 1 0 1 0 0 0 0 1 0 2 1 4 5 1 2 4 2 4 4 0 2 1 0 0 1 3 1 1 1 2 0 0 1 >SIU86638#7\U86638\1511..4147\2637\g2062619\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g2062619" 5 2 1 0 26 22 12 16 10 9 14 22 10 4 2 14 8 6 28 14 6 36 17 5 4 7 19 6 10 10 22 13 12 10 12 15 13 10 20 19 14 41 27 23 3 8 25 25 14 17 11 25 9 18 12 14 20 16 13 18 34 0 0 1 >SIU86638#8\U86638\3981..4772\792\g2062620\Simian immunodeficiency virus\Simian immunodeficiency virus proviral isolate H824 pol gene,partial cds, vif, vpx, tat, rev, env, and nef genes, complete cds,and 3' LTR./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g2062620" 1 2 2 1 14 6 6 2 3 2 7 4 7 5 1 2 2 1 2 2 0 7 8 1 1 2 6 1 2 5 13 6 5 1 4 1 2 4 7 9 2 5 3 6 1 3 13 12 4 13 9 6 0 1 0 4 4 2 3 8 7 0 0 1 >SIU95965\U95965\1..1521\1521\g2439992\Simian immunodeficiency virus\Simian immunodeficiency virus Gag polyprotein (gag) gene, completecds./gene="gag"/codon_start=1/product="Gag polyprotein"/db_xref="PID:g2439992" 1 1 0 0 18 6 7 3 12 3 12 8 5 1 1 3 6 3 12 3 2 6 27 7 2 2 23 7 1 8 22 11 7 4 10 5 10 2 22 17 10 13 22 18 7 4 20 13 7 9 7 5 7 7 2 8 7 4 10 16 10 0 1 0 >SIV1A11AA#1\M76764\1052..2584\1533\g334173\Simian immunodeficiency virus\Simian immunodeficiency virus clone 1A11, complete genome./codon_start=1/product="gag polyprotein"/db_xref="PID:g334173" 1 1 0 0 20 6 6 3 13 4 12 8 6 1 1 3 7 2 10 2 2 6 27 7 2 2 20 6 3 10 21 6 8 6 12 6 11 1 22 17 11 13 18 21 7 4 20 14 9 10 7 5 7 7 2 7 6 6 10 15 10 0 1 0 >SIV1A11AA#3\M76764\5339..5983\645\g334175\Simian immunodeficiency virus\Simian immunodeficiency virus clone 1A11, complete genome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334175" 1 0 0 0 10 8 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 7 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 4 2 1 2 12 0 0 1 >SIV1A11AA#4\M76764\5811..6149\339\g334176\Simian immunodeficiency virus\Simian immunodeficiency virus clone 1A11, complete genome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334176" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 2 2 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIV1A11AA#6\M76764\join(6301..6596,8799..8898)\396\g334171\Simian immunodeficiency virus\Simian immunodeficiency virus clone 1A11, complete genome./codon_start=1/product="tat"/db_xref="PID:g334171" 1 1 0 0 5 3 2 1 1 2 1 3 5 4 0 4 1 0 4 1 1 3 2 2 1 2 5 1 2 4 0 3 3 0 0 0 2 0 4 8 5 2 1 4 2 1 5 8 0 0 2 3 6 4 0 2 2 1 0 1 0 0 1 0 >SIV1A11AA#7\M76764\join(6527..6596,8799..9055)\327\g334172\Simian immunodeficiency virus\Simian immunodeficiency virus clone 1A11, complete genome./codon_start=1/product="rev"/db_xref="PID:g334172" 1 0 2 0 7 5 2 3 3 3 0 2 1 0 1 0 1 3 2 1 2 3 7 0 1 5 1 2 0 3 1 1 0 0 0 0 0 0 1 1 2 1 4 5 1 2 4 2 4 5 0 2 1 0 0 1 4 1 1 1 2 0 0 1 >SIV1A11AA#9\M76764\9073..9864\792\g334177\Simian immunodeficiency virus\Simian immunodeficiency virus clone 1A11, complete genome./codon_start=1/product="nef"/db_xref="PID:g334177" 1 0 2 1 14 5 4 3 4 2 7 4 6 5 2 2 2 2 2 2 0 8 10 1 0 2 7 1 1 3 11 5 4 1 4 1 2 4 7 8 2 4 3 7 0 4 14 15 6 13 9 6 0 1 0 4 5 2 3 8 7 0 0 1 >SIV6P12#1\L09211\1021..2544\1524\g310398\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="gag protein"/db_xref="PID:g310398" 0 1 1 0 22 6 6 4 10 5 13 8 5 2 0 2 5 4 12 1 2 8 22 7 5 6 20 5 3 9 20 9 7 8 10 4 10 3 23 16 9 14 24 12 5 5 22 13 8 9 6 6 6 8 2 7 9 3 11 14 10 0 1 0 >SIV6P12#2\L09211\2301..5369\3069\g310399\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="pol polyprotein"/db_xref="PID:g310399" 1 0 1 0 35 10 20 2 12 3 30 10 13 7 1 4 5 8 27 18 1 12 25 13 4 13 38 10 2 13 45 11 16 9 43 9 11 9 58 24 11 28 34 27 5 19 65 23 11 33 8 18 4 6 13 22 39 12 24 21 26 0 1 0 >SIV6P12#3\L09211\5299..5943\645\g310400\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/label=Vef/product="vif protein"/db_xref="PID:g310400" 3 0 0 0 9 5 5 2 7 1 2 3 2 2 0 1 5 3 4 2 0 7 5 3 2 1 5 2 1 4 7 3 2 1 6 2 4 2 9 7 3 8 0 8 1 7 6 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIV6P12#4\L09211\5771..6109\339\g310401\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="vpx protein"/db_xref="PID:g310401" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 1 1 2 0 0 1 3 2 1 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 0 4 7 3 2 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIV6P12#5\L09211\6111..6416\306\g310402\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="vpr protein"/db_xref="PID:g310402" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 2 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 1 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIV6P12#6\L09211\join(6253..6545,8790..8886)\390\g310396\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="tat protein"/db_xref="PID:g310396" 1 1 1 0 5 2 3 1 1 3 1 2 4 5 1 4 1 1 3 0 1 3 2 1 1 1 4 2 1 1 1 3 0 0 0 0 3 0 2 10 2 1 3 3 1 2 3 13 2 2 2 3 4 5 0 1 2 1 1 2 0 0 1 0 >SIV6P12#7\L09211\join(6488..6545,8790..9028)\297\g310397\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="rev protein"/db_xref="PID:g310397" 1 0 1 0 8 5 2 2 2 2 0 5 1 0 0 0 3 1 0 0 1 1 6 1 2 4 2 3 0 4 1 0 1 0 0 0 0 1 0 1 3 0 2 5 0 3 4 3 3 3 0 2 0 0 0 1 2 1 2 1 2 0 0 1 >SIV6P12#8\L09211\6558..9227\2670\g310403\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="envelope polyprotein"/db_xref="PID:g310403" 5 3 1 2 31 16 12 15 11 7 13 23 13 6 2 7 8 10 40 13 7 23 21 7 1 8 19 6 9 14 23 11 9 14 18 12 13 11 23 16 13 41 26 30 2 7 34 16 11 17 7 26 8 20 12 14 23 12 16 15 36 0 0 1 >SIV6P12#9\L09211\9061..9846\786\g310404\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.12), genomicsequence./codon_start=1/product="nef protein"/db_xref="PID:g310404" 0 1 0 2 11 3 1 4 3 1 6 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 4 7 5 6 5 5 3 2 2 8 11 3 4 8 6 1 4 13 9 6 10 8 6 0 3 1 7 5 2 1 8 8 1 0 0 >SIV6P6#1\L09212\1021..2544\1524\g310408\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="gag protein"/db_xref="PID:g310408" 0 1 1 0 22 6 6 4 10 5 13 8 5 2 0 2 5 4 12 1 2 8 22 7 5 6 20 5 3 9 20 9 7 8 10 4 10 3 23 16 9 14 24 12 5 5 22 13 8 9 6 6 6 8 2 7 9 3 11 14 10 0 1 0 >SIV6P6#2\L09212\2301..5369\3069\g310409\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="pol polyprotein"/db_xref="PID:g310409" 1 0 1 0 35 10 20 2 12 3 30 10 13 7 1 4 5 8 27 18 1 12 25 13 4 13 38 10 2 13 45 11 16 9 43 9 11 9 58 24 11 28 34 27 5 19 65 23 11 33 8 18 4 6 13 22 39 12 24 21 26 0 1 0 >SIV6P6#3\L09212\5299..5943\645\g310410\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="vif protein"/db_xref="PID:g310410" 3 0 0 0 9 5 5 2 7 1 2 3 2 2 0 1 5 3 4 2 0 7 5 3 2 1 5 2 1 4 7 3 2 1 6 2 4 2 9 7 3 8 0 8 1 7 6 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIV6P6#4\L09212\5771..6109\339\g310411\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="vpx protein"/db_xref="PID:g310411" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 1 1 2 0 0 1 3 2 1 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 0 4 7 3 2 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIV6P6#5\L09212\6111..6416\306\g310412\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="vpr protein"/db_xref="PID:g310412" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 2 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 1 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIV6P6#6\L09212\join(6253..6551,8790..8886)\396\g310406\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="tat protein"/db_xref="PID:g310406" 1 1 1 0 5 2 3 1 1 3 1 2 4 5 1 4 1 1 3 0 1 3 2 1 1 1 4 2 1 1 1 3 0 0 0 0 3 0 3 10 2 1 3 3 1 2 3 13 3 2 2 3 4 5 0 1 2 1 1 2 0 0 1 0 >SIV6P6#7\L09212\join(6488..6551,8790..9028)\303\g310407\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="rev protein"/db_xref="PID:g310407" 1 0 1 0 8 5 2 2 2 2 0 5 1 0 0 0 3 1 1 0 1 1 6 1 2 4 2 3 0 4 1 0 1 0 0 0 0 1 0 1 3 1 2 6 0 2 4 3 3 3 0 2 0 0 0 1 2 1 2 1 2 0 0 1 >SIV6P6#8\L09212\6558..9227\2670\g310413\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="envelope polyprotein"/db_xref="PID:g310413" 5 3 1 2 31 16 12 15 11 7 13 23 13 6 2 7 8 10 40 13 7 23 21 7 1 8 19 6 9 14 23 11 9 14 18 12 13 11 23 16 13 41 26 30 2 7 34 16 11 17 7 26 8 20 12 14 23 12 16 15 36 0 0 1 >SIV6P6#9\L09212\9061..9846\786\g310414\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.6), genomicsequence./codon_start=1/product="nef protein"/db_xref="PID:g310414" 0 1 0 2 11 3 1 4 3 1 6 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 4 7 5 6 5 5 3 2 2 8 11 3 4 8 6 1 4 13 9 6 10 8 6 0 3 1 7 5 2 1 8 8 1 0 0 >SIV6P9#1\L09213\1021..2544\1524\g310418\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="gag protein"/db_xref="PID:g310418" 0 1 1 0 22 6 6 4 10 5 13 8 5 2 0 2 5 4 12 1 2 8 22 7 5 6 20 5 3 9 20 9 7 8 10 4 10 3 23 16 9 14 24 12 5 5 22 13 8 9 6 6 6 8 2 7 9 3 11 14 10 0 1 0 >SIV6P9#2\L09213\2301..5369\3069\g310419\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="pol polyprotein"/db_xref="PID:g310419" 1 0 1 0 35 10 20 2 12 3 30 10 13 7 1 4 5 8 27 18 1 12 25 13 4 13 38 10 2 13 45 11 16 9 43 9 11 9 58 24 11 28 34 27 5 19 65 23 11 33 8 18 4 6 13 22 39 12 24 21 26 0 1 0 >SIV6P9#3\L09213\5299..5943\645\g310420\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="vif protein"/db_xref="PID:g310420" 3 0 0 0 9 5 5 2 7 1 2 3 2 2 0 1 5 3 4 2 0 7 5 3 2 1 5 2 1 4 7 3 2 1 6 2 4 2 9 7 3 8 0 8 1 7 6 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIV6P9#4\L09213\5771..6109\339\g310421\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="vpx protein"/db_xref="PID:g310421" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 1 1 2 0 0 1 3 2 1 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 0 4 7 3 2 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIV6P9#5\L09213\6111..6416\306\g310422\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="vpr protein"/db_xref="PID:g310422" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 2 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 1 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIV6P9#6\L09213\join(6253..6551,8790..8886)\396\g310417\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="tat protein"/db_xref="PID:g310417" 1 1 1 0 5 2 3 1 1 3 1 2 4 5 1 4 1 1 3 0 1 3 2 1 1 1 4 2 1 1 1 3 0 0 0 0 3 0 3 10 2 1 3 3 1 2 3 13 3 2 2 3 4 5 0 1 2 1 1 2 0 0 1 0 >SIV6P9#7\L09213\join(6488..6551,8790..9028)\303\g310416\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="rev protein"/db_xref="PID:g310416" 1 0 1 0 8 5 2 2 2 2 0 5 1 0 0 0 3 1 1 0 1 1 6 1 2 4 2 3 0 4 1 0 1 0 0 0 0 1 0 1 3 1 2 6 0 2 4 3 3 3 0 2 0 0 0 1 2 1 2 1 2 0 0 1 >SIV6P9#8\L09213\6558..9227\2670\g310423\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="envelope polyprotein"/db_xref="PID:g310423" 5 3 1 2 31 16 12 15 11 7 13 23 13 6 2 7 8 10 40 13 7 23 21 7 1 8 19 6 9 14 23 11 9 14 18 12 13 11 23 16 13 41 26 30 2 7 34 16 11 17 7 26 8 20 12 14 23 12 16 15 36 0 0 1 >SIV6P9#9\L09213\9061..9846\786\g310424\Simian immunodeficiency virus\Simian immunodeficiency virus variant (clone PBj6.9), genomicsequence./codon_start=1/product="nef protein"/db_xref="PID:g310424" 0 1 0 2 11 3 1 4 3 1 6 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 4 7 5 6 5 5 3 2 2 8 11 3 4 8 6 1 4 13 9 6 10 8 6 0 3 1 7 5 2 1 8 8 1 0 0 >SIVAGM155#1\M29975\931..2493\1563\g334392\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334392" 2 3 1 0 12 6 6 7 6 7 9 7 5 1 1 5 1 5 11 5 1 5 21 10 6 6 19 8 6 4 18 9 17 4 13 4 9 3 30 12 14 15 17 20 6 5 22 12 8 10 4 10 7 8 4 7 10 7 4 16 9 1 0 0 >SIVAGM155#2\M29975\2199..5342\3144\g334393\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334393" 3 3 0 1 30 15 13 9 11 7 30 17 8 6 2 4 8 9 37 12 3 12 25 14 7 10 33 15 3 12 45 11 22 8 41 9 10 6 64 29 10 24 44 24 9 9 65 24 17 26 10 17 8 6 11 15 48 15 12 16 33 0 1 0 >SIVAGM155#3\M29975\5260..5958\699\g334394\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334394" 2 0 0 0 12 7 4 4 1 0 5 3 2 3 0 1 5 2 5 5 0 6 4 3 1 1 6 3 0 2 15 2 2 2 4 0 5 2 8 4 1 7 11 8 0 9 6 3 1 4 2 10 0 3 2 4 6 6 0 8 10 1 0 0 >SIVAGM155#4\M29975\5741..6100\360\g334395\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334395" 1 2 1 1 9 4 2 4 1 1 1 0 1 0 0 0 1 0 0 0 0 0 5 3 1 0 1 2 1 1 10 1 2 0 2 1 1 1 2 1 2 2 3 3 0 2 8 8 1 4 2 4 0 3 1 3 1 1 1 2 4 1 0 0 >SIVAGM155#5\M29975\join(6051..6268,8492..8633)\360\g334390\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334390" 0 2 1 1 4 3 2 0 0 1 1 2 0 3 1 0 3 0 4 2 1 0 1 1 1 1 3 1 0 2 3 1 2 2 1 0 2 1 7 6 0 4 3 7 1 2 3 4 6 1 1 2 5 2 2 2 1 1 5 1 0 0 0 1 >SIVAGM155#6\M29975\join(6208..6268,8492..8700)\270\g334391\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334391" 0 2 1 0 8 3 0 0 4 2 2 3 0 1 0 1 1 0 2 0 1 1 3 0 0 4 4 2 0 1 1 0 2 0 0 0 2 2 0 2 1 1 7 4 0 1 4 1 4 0 2 1 0 0 1 0 0 2 2 1 2 0 1 0 >SIVAGM155#7\M29975\6275..8581\2307\g334396\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334396" 5 1 2 1 11 10 10 2 12 4 19 20 13 3 2 9 4 6 35 12 7 12 18 7 2 4 24 4 7 18 23 10 13 6 21 8 8 8 27 22 18 36 16 25 4 14 25 15 11 15 10 16 12 15 11 14 22 11 7 13 28 0 1 0 >SIVAGM155#8\M29975\8724..9416\693\g334397\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) RNA, complete genome./codon_start=1/db_xref="PID:g334397" 1 0 1 1 8 6 3 2 4 4 4 7 7 2 1 0 1 0 5 2 1 2 6 1 4 2 7 2 0 2 8 5 5 2 4 0 2 3 3 10 3 5 5 4 5 4 13 3 6 11 5 4 4 1 2 6 4 4 3 3 7 0 1 0 >SIVAGM3#1\M30931\431..1996\1566\g334403\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334403" 1 3 1 0 19 5 7 6 6 4 12 6 6 1 1 4 2 5 11 5 0 4 21 11 3 5 21 6 5 6 21 9 11 3 15 3 13 0 28 15 4 18 22 14 2 9 26 12 13 6 9 5 8 7 6 7 12 7 3 17 9 1 0 0 >SIVAGM3#3\M30931\4763..5461\699\g334405\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334405" 3 0 0 0 11 8 6 2 3 1 3 4 3 2 1 1 4 3 8 3 0 5 2 3 1 3 5 3 1 6 12 2 5 0 3 0 4 1 6 7 1 3 8 7 4 7 7 6 1 5 4 8 0 2 3 4 6 1 1 8 11 1 0 0 >SIVAGM3#4\M30931\5244..5603\360\g334406\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334406" 1 4 1 0 6 5 4 2 1 1 0 2 1 0 0 0 1 0 0 0 0 1 3 3 2 0 2 2 0 2 6 1 4 0 2 0 2 0 3 1 1 2 4 2 0 2 11 4 2 5 1 4 1 2 2 3 1 1 0 4 4 0 0 1 >SIVAGM3#5\M30931\join(5554..5771,8013..8154)\360\g334401\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334401" 0 1 1 1 5 2 0 1 2 3 2 1 0 2 0 0 4 1 4 2 1 1 0 1 2 2 5 1 1 2 3 3 1 2 0 0 1 1 3 9 1 1 4 8 2 1 2 4 4 2 1 3 3 5 0 2 1 1 2 1 0 0 0 1 >SIVAGM3#6\M30931\join(5711..5771,8013..8221)\270\g334402\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334402" 1 2 0 0 8 3 1 3 3 0 0 5 2 0 0 1 1 1 1 0 0 0 2 2 0 3 1 3 2 2 1 0 1 0 0 0 4 0 1 0 2 1 7 4 1 1 6 1 2 1 0 1 0 0 1 0 1 2 1 1 2 0 1 0 >SIVAGM3#7\M30931\5778..8411\2634\g334407\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334407" 5 3 1 1 21 13 16 3 16 11 23 16 14 5 3 13 8 8 34 16 6 15 16 5 8 7 31 9 5 18 19 7 16 10 22 9 15 7 25 24 23 40 15 28 4 13 31 16 8 20 16 17 12 18 12 12 21 13 9 12 33 0 1 0 >SIVAGM3#8\M30931\8245..8934\690\g334408\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) proviral, complete genome./codon_start=1/db_xref="PID:g334408" 0 0 1 0 10 5 2 3 4 4 5 7 4 2 2 1 0 0 0 2 1 4 7 1 3 2 4 3 1 2 9 4 4 1 4 3 4 0 8 10 4 4 6 3 4 5 13 5 7 11 3 5 4 1 2 5 1 4 3 5 7 0 1 0 >SIVAGM677\M29973\897..2438\1542\g334421\Simian immunodeficiency virus\Simian immunodeficiency virus LTR and gag gene, complete cds./codon_start=1/db_xref="PID:g334421" 3 2 0 1 13 5 8 7 6 3 9 9 6 4 0 1 3 1 13 4 2 2 14 5 8 4 19 5 3 7 20 11 12 3 13 6 7 6 30 18 1 24 16 22 5 8 24 16 13 6 7 5 10 4 5 8 7 3 11 15 10 0 0 1 >SIVAGM677A#1\M58410\897..2438\1542\g334423\Simian immunodeficiency virus\Simian (African green monkey) immunodeficiency virus, completegenome./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g334423" 3 2 0 1 13 5 8 7 6 3 9 9 6 4 0 1 3 1 13 4 2 2 14 5 8 4 19 5 3 7 20 11 12 3 13 6 7 6 30 18 1 24 16 22 5 8 24 16 13 6 7 5 10 4 5 8 7 3 11 15 10 0 0 1 >SIVAGM677A#3\M58410\5214..5873\660\g334424\Simian immunodeficiency virus\Simian (African green monkey) immunodeficiency virus, completegenome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334424" 2 0 0 0 13 7 2 2 3 2 3 2 4 2 0 2 3 2 7 4 1 1 2 1 1 1 4 2 0 5 11 1 4 1 5 0 5 1 5 9 2 6 8 8 2 7 8 4 1 4 5 7 1 2 2 4 5 5 2 6 10 1 0 0 >SIVAGM677A#4\M58410\5683..6039\357\g334425\Simian immunodeficiency virus\Simian (African green monkey) immunodeficiency virus, completegenome./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334425" 1 0 0 0 9 6 4 1 1 1 1 0 1 1 0 1 0 0 0 1 0 0 6 1 0 5 2 2 0 0 10 1 0 1 3 0 0 1 0 2 2 4 3 0 1 2 6 5 3 3 4 1 0 3 1 3 1 2 1 5 6 0 1 0 >SIVAGM677A#7\M58410\6202..8766\2565\g334426\Simian immunodeficiency virus\Simian (African green monkey) immunodeficiency virus, completegenome./gene="env"/codon_start=1/product="envelope protein"/db_xref="PID:g334426" 4 2 5 0 25 12 13 10 16 5 11 19 15 5 1 4 9 9 29 12 5 20 18 5 1 8 26 6 9 17 25 10 14 10 18 9 19 7 27 22 19 40 18 22 4 9 30 16 6 24 10 21 11 19 10 14 34 11 10 13 31 1 0 0 >SIVAGM677A#8\M58410\8600..9271\672\g334427\Simian immunodeficiency virus\Simian (African green monkey) immunodeficiency virus, completegenome./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334427" 3 5 0 0 5 2 2 2 6 1 3 7 4 5 0 1 1 0 1 2 0 1 4 1 5 4 5 2 1 1 5 7 8 2 1 6 5 0 5 12 3 1 5 5 3 4 10 7 8 11 4 3 2 2 2 7 5 2 0 7 7 0 1 0 >SIVAGM692\M29974\1..1542\1542\g334431\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) gag gene, complete cds./codon_start=1/db_xref="PID:g334431" 1 2 1 1 17 6 4 3 11 5 8 10 4 5 2 2 4 3 10 6 1 5 16 6 6 4 17 11 3 5 18 5 19 6 15 6 7 5 28 12 6 15 22 13 3 10 26 12 10 9 7 7 9 6 2 10 13 3 8 14 8 1 0 0 >SIVAGMAA#1\M66437\897..2438\1542\g334436\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="gag"/codon_start=1/db_xref="PID:g334436" 3 2 0 1 13 5 8 7 6 3 9 9 6 4 0 1 3 1 13 4 2 2 14 5 8 4 19 5 3 7 20 11 12 3 13 6 7 6 30 18 1 24 16 22 5 8 24 16 13 6 7 5 10 4 5 8 7 3 11 15 10 0 0 1 >SIVAGMAA#2\M66437\2141..5314\3174\g334437\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="pol"/codon_start=1/db_xref="PID:g334437" 4 0 1 1 36 12 17 8 9 7 26 14 8 6 0 8 7 15 31 15 3 13 28 10 2 13 33 8 7 7 45 8 20 9 36 10 15 10 57 33 17 28 41 26 9 15 64 28 18 25 7 20 6 8 8 14 37 20 20 21 33 1 0 0 >SIVAGMAA#3\M66437\5214..5873\660\g334438\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="vif"/codon_start=1/db_xref="PID:g334438" 2 0 0 0 13 7 2 2 3 2 3 2 4 2 0 2 3 2 7 4 1 1 2 1 1 1 4 2 0 5 11 1 4 1 5 0 5 1 5 9 2 6 8 8 2 7 8 4 1 4 5 7 1 2 2 4 5 5 2 6 10 1 0 0 >SIVAGMAA#4\M66437\5683..6039\357\g334439\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="vpx"/codon_start=1/db_xref="PID:g334439" 1 0 0 0 9 6 4 1 1 1 1 0 1 1 0 1 0 0 0 1 0 0 6 1 0 5 2 2 0 0 10 1 0 1 3 0 0 1 0 2 2 4 3 0 1 2 6 5 3 3 4 1 0 3 1 3 1 2 1 5 6 0 1 0 >SIVAGMAA#6\M66437\join(6135..6195,8371..8750)\441\g334435\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="rev1"/codon_start=1/db_xref="PID:g334435" 0 1 1 0 5 5 2 2 4 2 2 1 1 1 1 2 6 3 1 2 1 2 3 0 1 5 6 1 1 3 4 5 3 0 1 1 2 0 2 7 2 1 9 9 0 4 2 5 3 2 1 2 3 1 2 0 2 2 3 1 2 0 0 1 >SIVAGMAA#7\M66437\6202..8766\2565\g334440\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="env"/codon_start=1/db_xref="PID:g334440" 4 2 5 0 25 12 13 10 16 5 11 19 15 5 1 4 9 9 29 12 5 20 18 5 1 8 26 6 9 17 25 10 14 10 18 9 19 7 27 22 19 40 18 22 4 9 30 16 6 24 10 21 11 19 10 14 34 11 10 13 31 1 0 0 >SIVAGMAA#8\M66437\8600..9271\672\g334441\Simian immunodeficiency virus\Simian immunodeficiency virus proviral (African Green Monkey,complete genome./gene="nef"/codon_start=1/db_xref="PID:g334441" 3 5 0 0 5 2 2 2 6 1 3 7 4 5 0 1 1 0 1 2 0 1 4 1 5 4 5 2 1 1 5 7 8 2 1 6 5 0 5 12 3 1 5 5 3 4 10 7 8 11 4 3 2 2 2 7 5 2 0 7 7 0 1 0 >SIVAJ10GP4\M74951\1..261\261\g334443\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ10) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334443" 1 0 1 0 6 0 2 1 4 0 1 6 2 2 2 1 0 1 0 4 2 4 1 0 0 0 3 0 2 2 0 2 4 3 0 3 3 0 1 1 0 1 5 4 0 0 2 0 1 0 1 0 0 0 1 2 1 0 0 2 1 1 0 0 >SIVAJ1GP41\M75141\1..1101\1101\g334445\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ1) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334445" 3 2 1 0 13 8 8 10 9 5 6 11 1 3 2 6 5 1 3 7 4 12 7 1 1 2 8 3 9 5 7 7 7 6 4 8 6 2 2 9 5 7 18 16 1 2 10 10 7 3 4 10 2 1 7 5 12 6 5 4 17 0 0 1 >SIVAJ2GP41\M75142\1..1101\1101\g334447\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ2) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334447" 3 2 1 0 13 8 8 10 9 5 6 11 1 3 2 6 4 1 3 7 4 12 8 1 0 2 8 3 9 5 8 8 6 6 4 8 6 3 2 9 5 8 18 16 1 2 10 10 7 2 4 10 2 1 8 4 12 6 4 4 17 0 0 1 >SIVAJ4GP41\M74945\1..1101\1101\g334450\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ4) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334450" 3 2 1 0 13 8 8 10 9 5 6 11 1 3 2 6 5 1 3 7 4 12 7 1 1 2 8 3 9 5 8 7 6 6 4 8 6 2 2 9 4 8 18 16 1 2 10 10 8 2 4 10 2 1 7 5 12 6 5 4 17 0 0 1 >SIVAJ5GP41\M74946\1..1101\1101\g334452\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ5) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334452" 3 2 1 0 12 9 8 10 10 5 6 10 1 3 2 6 5 1 3 7 4 12 7 1 1 2 8 3 9 5 8 7 6 6 5 8 6 2 2 9 5 8 18 16 1 2 10 10 7 2 4 10 2 1 7 5 10 7 5 4 17 0 0 1 >SIVAJ6GP41\M74947\1..1101\1101\g334454\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334454" 3 2 1 0 12 9 8 9 9 5 6 11 1 3 2 6 4 1 3 8 4 12 7 2 1 2 7 3 9 5 8 8 6 6 5 7 6 3 2 9 5 8 18 16 1 2 9 11 7 2 4 10 2 1 7 5 11 7 4 4 17 0 0 1 >SIVAJ7GP41\M74948\1..1101\1101\g334456\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ7) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334456" 3 2 1 0 12 9 8 10 9 5 6 11 1 3 2 6 5 1 3 7 4 12 7 1 1 2 9 3 8 5 8 7 6 6 4 8 6 2 2 9 5 8 18 16 1 2 9 11 7 2 4 10 2 1 7 5 11 7 5 4 17 0 0 1 >SIVAJ8GP41\M74949\1..1101\1101\g334458\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ8) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334458" 3 2 1 0 12 8 8 10 10 5 6 10 1 3 2 6 5 1 3 7 4 12 7 1 1 2 8 3 9 5 8 7 7 6 5 8 6 2 2 9 5 8 18 16 1 2 10 10 7 2 4 10 2 1 7 5 10 7 5 4 17 0 0 1 >SIVAJ9GP41\M74950\1..1101\1101\g334460\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneAJ9) env gene, complete cds./gene="env"/codon_start=1/product="gp41"/db_xref="PID:g334460" 3 2 1 0 13 8 8 10 9 5 6 11 2 3 1 6 5 1 3 7 4 12 7 1 1 2 8 3 9 5 7 7 6 6 4 8 6 3 2 9 5 8 18 16 1 2 10 11 7 2 4 10 2 1 7 5 12 6 4 4 17 0 0 1 >SIVCOMGNM#1\L06042\795..2459\1665\g294961\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="gag"/codon_start=1/product="core protein"/db_xref="PID:g294961" 2 1 1 0 12 9 8 12 5 6 9 4 8 4 5 8 7 6 13 3 0 4 19 10 4 8 20 9 5 11 17 7 14 2 13 8 6 6 30 17 10 15 26 18 3 6 20 17 14 7 4 6 5 7 4 7 7 6 13 14 12 0 0 1 >SIVCOMGNM#2\L06042\2198..5293\3096\g294962\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="pol"/codon_start=1/label=Pol/product="reverse transcriptase"/db_xref="PID:g294962" 3 1 2 1 25 12 17 16 4 11 26 14 13 7 2 8 9 12 41 9 3 13 36 15 2 6 35 12 0 10 44 7 12 8 36 10 13 7 56 25 8 29 45 30 10 12 46 33 23 25 13 22 2 8 9 16 40 12 19 19 27 0 0 1 >SIVCOMGNM#3\L06042\5238..5903\666\g294963\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="vif"/codon_start=1/label=Vif/product="infectivity factor"/db_xref="PID:g294963" 1 1 0 1 11 3 2 1 0 5 4 5 4 3 0 0 2 2 6 3 2 5 6 3 0 1 8 2 1 0 5 4 1 1 3 2 2 3 11 2 4 3 9 7 4 7 6 2 6 4 5 6 3 4 2 4 8 3 3 4 11 0 0 1 >SIVCOMGNM#4\L06042\5701..6042\342\g294964\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="vpr"/codon_start=1/label=Vpr/db_xref="PID:g294964" 0 0 1 0 6 0 0 2 1 1 1 2 0 4 0 1 0 0 3 3 0 3 3 2 1 3 5 1 1 3 3 0 2 0 4 1 3 1 0 2 2 5 4 1 1 4 6 3 1 1 1 2 0 1 4 3 1 1 1 5 3 0 1 0 >SIVCOMGNM#5\L06042\join(5988..6213,8352..8719)\594\g951432\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="tat"/codon_start=1/product="positive regulator"/db_xref="PID:g951432" 5 5 1 2 7 7 3 1 2 6 1 4 1 2 1 2 6 3 7 1 3 2 6 3 1 2 5 2 1 6 8 3 2 1 1 0 0 1 3 3 1 4 5 13 1 2 3 5 2 4 4 4 6 4 4 3 2 4 2 1 2 1 1 0 >SIVCOMGNM#6\L06042\join(6154..6214,8352..8719)\429\g951433\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="rev"/codon_start=1/product="differential regulator"/db_xref="PID:g951433" 4 4 1 2 6 6 3 2 3 4 0 3 0 0 1 1 6 2 3 1 2 1 2 2 1 1 4 1 2 5 5 3 2 1 1 0 0 1 0 1 0 3 5 11 2 1 2 4 2 2 4 2 1 1 1 3 2 3 1 2 2 1 1 0 >SIVCOMGNM#7\L06042\6225..8723\2499\g294965\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="env"/codon_start=1/label=Env/product="envelope protein"/db_xref="PID:g294965" 4 2 4 3 19 12 6 12 8 10 13 32 7 5 4 9 10 12 26 14 8 14 15 8 4 9 34 10 5 17 25 11 13 2 17 8 8 10 30 14 18 31 24 24 3 9 25 19 15 16 12 17 6 18 21 20 18 9 18 9 26 0 0 1 >SIVCOMGNM#8\L06042\8557..9279\723\g294966\Simian immunodeficiency virus\Simian immunodeficiency virus complete genome./gene="nef"/codon_start=1/label=nef/product="negative regulator"/db_xref="PID:g294966" 0 3 2 0 5 2 4 7 2 4 5 5 5 1 5 3 2 2 6 4 2 1 9 2 4 6 2 2 1 1 15 4 5 4 1 0 3 1 6 5 2 4 6 9 1 7 7 11 8 3 5 4 2 2 3 3 5 4 3 4 6 0 1 0 >SIVENV#1\M90048\1..2652\2652\g334467\Simian immunodeficiency virus\Simian immunodeficiency virus (clone B670S9) envelope glycoprotein(env) and Nef protein (nef) genes, complete CDS and partial LTR./gene="env"/standard_name="Env protein"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g334467" 2 3 2 0 36 18 9 13 10 9 12 26 9 7 3 9 7 9 32 14 2 27 18 8 4 7 19 7 8 12 21 9 12 14 20 12 14 12 16 20 14 44 22 27 3 7 33 19 11 18 6 26 9 20 12 15 25 11 18 16 35 0 0 1 >SIVENV#2\M90048\2486..3277\792\g334468\Simian immunodeficiency virus\Simian immunodeficiency virus (clone B670S9) envelope glycoprotein(env) and Nef protein (nef) genes, complete CDS and partial LTR./gene="nef"/standard_name="Nef protein"/codon_start=1/db_xref="PID:g334468" 1 0 2 1 11 3 4 2 3 1 6 7 3 6 1 2 1 2 5 2 0 1 14 1 0 0 2 3 2 7 11 4 7 3 6 2 2 0 6 12 2 6 7 5 3 2 16 12 4 15 8 5 1 0 2 5 3 3 2 7 9 0 0 1 >SIVENVGLYA\L35596\1..2646\2646\g532231\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 20) proviral envelopeglycoprotein (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g532231" 4 2 1 0 27 18 11 14 12 10 16 19 10 5 2 14 7 9 32 15 6 36 20 4 2 7 19 6 10 8 24 13 10 10 10 16 13 9 20 21 12 41 26 25 3 9 26 21 12 22 10 26 9 18 14 13 20 16 14 18 34 0 0 1 >SIVENVGLYB\L35597\1..2637\2637\g532233\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 11) proviral envelopeglycoprotein (env) gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g532233" 4 2 1 0 25 19 11 15 11 9 14 23 8 5 2 14 6 8 28 14 6 36 21 5 2 7 21 7 10 8 24 14 10 10 11 16 13 9 21 22 14 38 26 25 3 9 23 24 12 22 11 25 9 18 12 14 21 15 14 17 34 0 0 1 >SIVGAGAA#1\M80193\535..2058\1524\g334510\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g334510"/IGNORED_CODON=17 0 2 1 0 20 5 7 4 10 5 12 9 4 2 0 2 4 4 12 1 2 8 22 6 3 6 21 5 2 7 18 8 7 8 11 4 11 3 22 15 9 15 23 12 5 5 22 13 8 9 6 4 5 8 2 7 7 3 11 14 9 0 1 0 >SIVGAGAA#2\M80193\1815..4883\3069\g334511\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="pol"/codon_start=1/product="reverse transcriptase"/db_xref="PID:g334511"/IGNORED_CODON=18 1 0 1 0 36 10 20 1 12 4 30 10 13 7 1 3 4 8 27 18 0 14 27 13 4 12 35 9 2 12 42 14 14 9 41 9 13 7 58 21 11 28 33 25 5 19 63 23 10 32 7 19 4 6 13 22 39 11 26 20 26 0 1 0 >SIVGAGAA#3\M80193\4813..5457\645\g334512\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334512"/IGNORED_CODON=8 3 0 0 0 7 6 5 2 7 0 2 3 2 2 0 1 5 2 5 2 0 6 4 3 3 1 6 2 1 5 7 3 2 1 6 1 3 2 8 6 3 6 0 8 1 7 5 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIVGAGAA#4\M80193\5285..5623\339\g334513\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334513"/IGNORED_CODON=10 1 0 0 0 3 5 3 0 1 0 1 3 1 0 0 0 1 1 1 0 0 1 3 2 0 6 4 0 0 1 6 1 5 0 0 2 1 0 3 1 2 1 0 2 1 4 6 4 1 1 3 0 3 1 2 1 2 1 1 4 5 1 0 0 >SIVGAGAA#5\M80193\5625..5930\306\g334514\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334514"/IGNORED_CODON=5 0 1 0 0 9 1 1 4 2 2 1 1 1 1 0 1 0 0 1 1 0 1 2 1 2 3 2 2 1 0 6 2 0 2 1 0 1 1 1 0 2 1 0 3 1 2 10 2 1 4 0 2 1 0 2 1 1 4 1 1 2 1 0 0 >SIVGAGAA#6\M80193\join(5776..6066,8311..8406)\387\g334508\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g334508"/IGNORED_CODON=8 1 1 1 0 4 2 3 1 1 2 1 2 4 4 1 4 1 1 3 0 1 3 2 1 1 0 3 2 1 1 1 2 0 0 0 0 3 0 2 11 2 1 3 3 1 2 3 12 2 2 2 3 3 5 0 1 1 1 1 1 0 0 1 0 >SIVGAGAA#7\M80193\join(6002..6066,8311..8548)\303\g334509\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g334509"/IGNORED_CODON=5 1 0 1 0 7 4 2 2 2 2 0 4 1 0 0 0 3 2 1 0 1 1 5 1 2 4 2 3 0 5 2 0 1 0 0 0 0 0 0 1 2 1 2 6 0 2 3 3 2 3 0 2 0 0 0 1 2 1 2 1 2 0 0 1 >SIVGAGAA#8\M80193\6072..8747\2676\g334515\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334515"/IGNORED_CODON=40 5 3 2 2 29 16 11 15 12 7 12 23 11 5 3 6 7 11 37 13 4 22 20 7 1 8 19 6 8 13 23 9 9 14 17 12 12 11 23 15 12 41 23 25 2 7 34 16 9 17 8 23 8 20 12 11 23 13 14 16 34 0 0 1 >SIVGAGAA#9\M80193\8581..9366\786\g334516\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate PBJ14) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, tat gene, and rev gene, complete cds./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334516"/IGNORED_CODON=8 0 1 0 1 11 2 1 4 2 1 7 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 5 7 5 6 5 4 2 3 3 8 9 2 4 7 6 1 4 13 9 6 9 6 6 1 3 2 5 5 2 1 8 8 1 0 0 >SIVGAGAB#1\M80194\535..2058\1524\g334520\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g334520"/IGNORED_CODON=17 0 2 1 0 20 5 7 4 10 5 12 9 5 2 0 2 4 4 12 1 2 8 21 6 3 6 21 5 2 7 18 9 7 7 11 4 11 3 22 15 9 15 22 13 5 5 22 13 7 10 6 4 5 7 3 7 7 3 11 14 9 0 1 0 >SIVGAGAB#2\M80194\1815..4883\3069\g334521\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="pol"/codon_start=1/product="reverse transcriptase"/db_xref="PID:g334521"/IGNORED_CODON=18 1 0 1 0 34 10 22 1 11 3 30 10 12 7 2 3 5 8 27 18 0 14 27 13 4 13 35 8 2 13 41 14 14 9 42 8 12 7 61 20 12 28 36 21 5 19 62 24 10 31 7 19 4 6 12 23 41 12 25 19 26 0 1 0 >SIVGAGAB#3\M80194\4813..5457\645\g334522\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334522"/IGNORED_CODON=8 3 0 0 0 7 6 5 2 7 0 2 3 2 2 0 1 4 3 5 2 0 6 4 3 3 1 6 2 1 5 7 3 2 1 7 1 2 2 8 6 3 6 1 7 1 7 5 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIVGAGAB#4\M80194\5285..5623\339\g334523\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334523"/IGNORED_CODON=10 1 0 0 0 3 5 3 0 1 0 1 3 1 0 0 0 1 1 1 0 0 1 3 2 0 6 4 0 0 1 6 1 5 0 0 2 1 0 3 1 2 1 0 2 1 4 6 4 1 1 3 0 3 1 2 1 2 1 1 4 5 1 0 0 >SIVGAGAB#5\M80194\5625..5930\306\g334524\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334524"/IGNORED_CODON=6 0 1 0 0 7 1 1 4 2 2 1 1 1 1 0 1 0 0 1 1 0 1 2 1 2 3 2 2 1 0 7 2 0 2 1 0 1 1 1 0 2 1 0 3 1 2 10 2 1 4 0 2 1 0 2 1 1 4 1 1 2 1 0 0 >SIVGAGAB#6\M80194\join(5776..6066,8296..8391)\387\g334518\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g334518"/IGNORED_CODON=8 1 1 1 0 3 2 2 1 1 2 1 2 4 4 1 3 1 1 3 0 1 3 2 1 1 0 3 2 1 1 1 2 0 0 1 0 3 0 2 12 2 1 3 3 1 2 3 12 2 2 2 3 3 5 0 2 1 1 1 1 0 0 1 0 >SIVGAGAB#8\M80194\6072..8732\2661\g334525\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="env"/codon_start=1/product="envelope protein"/db_xref="PID:g334525"/IGNORED_CODON=40 5 3 2 2 29 16 11 15 12 7 12 22 11 5 4 6 7 11 32 14 4 22 21 7 1 8 18 5 8 13 24 9 9 14 18 12 13 10 23 15 12 41 22 25 2 7 33 16 9 17 8 23 8 20 12 11 23 13 14 16 34 0 0 1 >SIVGAGAB#9\M80194\8566..9351\786\g334526\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate SMM9) gag gene, reversetranscriptase (pol) gene, vif gene, vpx gene, vpr gene, envelope(env) gene, nef gene, and tat gene, complete cds'; rev gene, 5'end./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334526"/IGNORED_CODON=8 0 1 0 1 10 2 1 4 2 1 7 7 5 2 1 3 3 2 5 3 0 2 8 2 1 3 9 0 1 4 8 5 6 6 4 2 3 3 8 9 2 5 7 6 1 4 14 9 5 9 6 6 1 3 2 5 5 2 1 8 8 0 1 0 >SIVJ11P55\M74934\1..1533\1533\g334585\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneJ11) gag gene, complete cds./gene="gag"/codon_start=1/product="p55"/db_xref="PID:g334585" 1 1 0 0 20 6 6 3 13 4 13 7 6 1 1 3 8 1 11 2 2 6 26 7 3 2 20 6 3 10 22 8 7 5 11 6 13 1 20 19 10 13 19 20 7 4 20 14 9 10 7 5 7 7 2 7 6 5 10 14 10 0 1 0 >SIVJ12P55\M74935\1..1533\1533\g334587\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneJ12) gag gene, complete cds./gene="gag"/codon_start=1/product="p55"/db_xref="PID:g334587" 2 1 0 0 20 6 6 3 13 4 12 8 6 1 1 3 8 1 11 2 2 6 26 7 3 2 20 6 3 10 22 8 7 5 12 6 12 1 22 17 10 13 18 20 7 4 20 14 9 10 7 5 7 7 2 7 6 5 10 14 10 0 1 0 >SIVJ2P55\M74925\1..1533\1533\g334589\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneJ2) gag gene, complete cds./gene="gag"/codon_start=1/product="p55"/db_xref="PID:g334589" 1 1 0 0 20 6 6 3 13 4 13 7 6 1 1 3 8 2 11 2 2 6 27 7 2 2 20 6 3 10 21 8 8 5 11 6 13 1 21 17 10 12 20 19 7 4 22 13 8 11 7 5 8 6 2 7 6 5 10 14 10 0 1 0 >SIVJ3P55\M74926\1..1533\1533\g334591\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneJ3) gag gene, complete cds./gene="gag"/codon_start=1/product="p55"/db_xref="PID:g334591" 1 1 1 0 20 5 5 3 12 4 13 8 6 1 1 3 8 1 11 2 2 6 27 7 3 2 20 6 3 10 20 8 8 5 11 6 13 1 22 18 10 13 18 21 7 4 21 14 9 10 7 5 7 7 2 7 6 5 10 14 9 0 1 0 >SIVJ8P55\M74931\1..1533\1533\g334598\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneJ8) gag gene, complete cds./gene="gag"/codon_start=1/product="p55"/db_xref="PID:g334598" 1 1 0 0 20 5 6 3 13 4 13 7 6 1 1 3 6 2 11 2 2 7 27 7 2 2 20 6 3 9 22 9 7 5 11 6 12 1 22 18 10 13 18 21 7 4 20 14 9 10 7 5 7 7 2 7 6 5 10 15 10 0 1 0 >SIVMM239#1\M33262\1309..2841\1533\g334650\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334650" 1 1 0 0 20 6 6 3 13 4 12 8 6 1 1 3 6 3 12 2 1 6 26 7 3 2 19 6 2 10 21 6 8 6 11 6 14 1 21 18 11 13 19 20 7 4 20 14 8 11 7 5 7 7 2 7 6 5 10 15 10 0 1 0 >SIVMM239#2\M33262\2484..5666\3183\g334651\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334651" 1 0 1 0 30 15 18 6 11 1 25 15 17 4 1 6 5 9 28 16 2 13 29 13 5 10 40 8 0 17 44 8 23 10 37 9 12 14 55 35 8 31 33 28 10 17 61 27 16 31 10 17 4 9 10 25 44 12 21 25 28 0 1 0 >SIVMM239#3\M33262\5596..6240\645\g334652\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334652" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM239#4\M33262\6068..6406\339\g334653\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334653" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM239#5\M33262\6407..6712\306\g334654\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334654" 1 1 0 0 6 1 2 4 2 2 1 1 1 1 0 1 1 0 0 1 0 1 3 1 1 4 2 0 1 2 7 2 1 1 1 0 1 1 2 0 0 4 3 0 1 4 11 2 1 2 0 1 1 0 2 1 1 4 1 3 2 1 0 0 >SIVMM239#6\M33262\join(6558..6853,9062..9158)\393\g334648\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334648" 1 2 1 0 4 2 2 1 1 2 1 2 5 4 1 4 0 0 4 1 1 2 2 2 1 2 5 1 2 3 0 3 2 0 0 0 2 0 6 7 6 1 2 3 1 1 4 10 0 1 2 3 6 4 0 2 2 1 1 1 0 0 1 0 >SIVMM239#7\M33262\join(6784..6853,9062..9315)\324\g334649\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334649" 1 0 2 0 7 4 2 3 3 3 0 2 1 0 1 0 1 2 3 1 1 3 6 1 1 5 1 2 0 3 1 1 0 0 0 0 0 0 1 1 3 2 4 5 1 2 4 3 3 5 0 2 1 0 0 1 3 1 1 1 2 0 0 1 >SIVMM239#8\M33262\6860..9499\2640\g334655\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334655" 5 2 0 0 26 20 12 16 11 9 13 22 10 5 2 14 6 8 29 15 5 32 19 5 2 6 20 8 10 10 23 12 10 11 13 16 14 9 22 22 15 38 25 25 3 9 23 24 12 20 10 26 8 19 11 15 22 15 14 17 34 0 0 1 >SIVMM239#10\M33262\9333..9611\279\g334656\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, isolate 239, completeproviral genome and flanking sequence./codon_start=1/db_xref="PID:g334656" 1 0 2 1 5 2 0 3 1 0 3 2 1 3 1 2 1 0 0 0 0 2 3 0 1 0 1 0 1 2 8 1 2 1 0 0 1 0 3 1 1 3 2 4 0 0 3 5 1 5 3 2 0 1 0 0 1 0 1 4 1 1 0 0 >SIVMM251#1\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\1041..2561\1521\g334660\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334660" 1 1 0 0 19 6 6 3 13 4 12 8 6 1 1 3 7 2 11 2 2 6 27 7 2 2 20 6 3 10 22 8 7 5 11 6 13 1 20 19 9 14 18 19 7 4 19 14 8 11 7 5 7 7 2 7 6 5 10 14 10 0 1 0 >SIVMM251#3\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\5316..5960\645\g334662\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334662" 1 0 0 0 10 10 5 2 5 1 3 3 1 1 0 1 6 3 5 4 0 3 5 4 2 2 7 1 1 3 8 2 2 1 6 3 3 2 9 6 2 2 3 7 0 6 6 5 3 5 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM251#4\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\5788..6126\339\g334663\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334663" 0 0 0 0 6 3 4 0 1 0 2 1 2 0 0 1 1 1 2 0 0 0 4 2 0 6 3 1 0 1 8 1 3 0 3 0 0 1 2 2 4 0 4 1 2 2 5 7 0 2 3 1 1 3 2 1 2 1 1 4 5 1 0 0 >SIVMM251#5\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\6127..6420\294\g334664\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334664" 1 1 0 0 5 1 1 4 1 2 1 2 1 1 0 1 0 0 0 1 0 2 3 1 1 4 2 0 1 1 6 3 1 1 1 0 1 1 2 0 1 4 3 0 1 4 11 2 1 2 0 1 1 0 1 2 1 3 1 2 2 0 0 1 >SIVMM251#6\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\join(6278..6573,8785..8884)\396\g334658\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334658" 1 2 1 0 5 2 1 2 1 3 2 2 4 2 1 4 0 0 4 2 1 2 2 2 1 2 4 1 3 3 1 2 2 0 0 0 2 0 3 9 6 2 2 3 1 1 3 11 0 1 2 3 6 4 0 2 2 1 1 1 0 0 1 0 >SIVMM251#7\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\join(6504..6573,8785..9041)\327\g334659\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334659" 1 0 2 0 7 5 2 3 3 3 0 2 2 0 1 0 2 2 2 1 2 3 5 1 1 5 1 2 0 3 1 1 0 1 0 0 0 0 1 1 2 1 4 5 1 2 4 2 4 4 1 1 1 0 0 1 4 1 1 1 2 0 0 1 >SIVMM251#9\M19499 M15897 M16125 M24614 X06391 X06393 X06879 Y00283 Y00294Y00295\9059..9802\744\g334665\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus, complete genome; isolateMm251, proviral DNA./codon_start=1/db_xref="PID:g334665" 1 1 2 1 9 5 5 2 2 0 8 5 4 5 1 2 1 2 1 1 0 6 9 1 1 2 7 2 2 5 12 5 5 1 4 1 2 2 9 8 1 4 3 9 0 3 14 10 3 14 9 6 0 2 0 3 4 2 3 8 7 1 0 0 >SIVMM316S#1\L22790\1..645\645\g431499\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316j) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431499" 1 0 0 1 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 7 2 3 2 6 3 3 2 10 7 3 3 3 7 0 5 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316S#2\L22790\473..811\339\g431500\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316j) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431500" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316T#1\L22791\1..645\645\g431503\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316k) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431503" 1 1 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 7 3 2 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 4 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316T#2\L22791\473..811\339\g431504\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316k) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431504" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 1 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 2 5 1 0 0 >SIVMM316U#1\L22792\1..645\645\g431507\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316l) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431507" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316U#2\L22792\473..811\339\g431508\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316l) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431508" 0 0 0 0 6 3 5 0 0 0 1 1 3 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316V#1\L22793\1..645\645\g431511\Simian immunodeficiency virus\Simmian immunodeficiency virus (Mm316m) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431511" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316V#2\L22793\473..811\339\g431512\Simian immunodeficiency virus\Simmian immunodeficiency virus (Mm316m) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431512" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 3 1 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316W#1\L22794\1..645\645\g431515\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316n) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431515" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 4 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 1 12 0 0 1 >SIVMM316W#2\L22794\473..811\339\g431516\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316n) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431516" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 4 8 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316X#1\L22795\1..645\645\g431519\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316o) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431519" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 3 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 4 7 4 0 3 4 5 3 1 2 12 0 0 1 >SIVMM316X#2\L22795\473..811\339\g431520\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316o) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431520" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 2 1 1 2 0 0 0 5 2 0 5 2 1 1 1 7 1 3 0 3 0 0 1 2 2 4 0 3 1 1 3 5 8 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316Y#1\L22796\1..645\645\g431523\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316p) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431523" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316Y#2\L22796\473..811\339\g431524\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316p) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431524" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316Z#1\L22797\1..645\645\g431527\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316q) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431527" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 9 2 1 2 6 3 3 2 10 6 3 3 3 7 0 6 6 6 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316Z#2\L22797\473..811\339\g431528\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316q) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431528" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 1 1 1 2 4 0 3 1 1 3 6 7 0 2 3 1 1 3 2 1 3 1 1 2 5 1 0 0 >SIVMM316ZA#1\L22798\1..645\645\g431531\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316r) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431531" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 5 0 2 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 4 6 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZA#2\L22798\473..811\339\g431532\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316r) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431532" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZB#1\L22799\1..645\645\g431535\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316s) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431535" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZB#2\L22799\473..811\339\g431536\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316s) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431536" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZC#1\L22800\1..645\645\g431539\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316t) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431539" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZC#2\L22800\473..811\339\g431540\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316t) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431540" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZD#1\L22801\1..645\645\g431543\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316u) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431543" 1 0 0 0 9 9 5 2 5 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 5 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 6 2 1 2 12 0 0 1 >SIVMM316ZD#2\L22801\473..811\339\g431544\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316u) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431544" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZE#1\L22802\1..645\645\g431547\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316v) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431547" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 1 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 3 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZE#2\L22802\473..811\339\g431548\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316v) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431548" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 1 0 1 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZF#1\L22803\1..645\645\g431551\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316w) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431551" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZF#2\L22803\473..811\339\g431552\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316w) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431552" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZG#1\L22804\1..645\645\g431555\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316x) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431555" 1 0 0 0 8 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 3 2 6 3 3 2 11 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 11 0 0 1 >SIVMM316ZG#2\L22804\473..811\339\g431556\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316x) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431556" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 1 3 1 1 3 5 7 0 1 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZH#1\L22805\1..645\645\g431559\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316y) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431559" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZH#2\L22805\473..811\339\g431560\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316y) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431560" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZI#1\L22806\1..645\645\g431563\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316z) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431563" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZI#2\L22806\473..811\339\g431564\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316z) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431564" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZJ#1\L22807\1..645\645\g431567\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316za) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431567" 1 0 0 0 9 9 4 2 6 1 3 3 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 7 3 3 3 7 0 6 6 5 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZJ#2\L22807\473..811\339\g431568\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316za) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431568" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 1 2 1 1 7 1 3 0 3 0 0 1 2 2 4 0 3 1 1 3 5 8 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZK#1\L22808\1..645\645\g431571\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zb) DNA, complete cds's./standard_name="VIF"/codon_start=1/db_xref="PID:g431571" 1 0 0 0 9 9 4 2 5 1 3 4 1 1 0 1 6 2 5 4 0 3 6 3 2 2 7 1 1 3 8 2 2 2 6 3 3 2 10 8 3 3 3 7 0 6 6 4 2 4 3 7 5 0 3 4 5 2 1 2 12 0 0 1 >SIVMM316ZK#2\L22808\473..811\339\g431572\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zb) DNA, complete cds's./standard_name="VPX"/codon_start=1/db_xref="PID:g431572" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 5 2 0 6 2 1 1 1 7 1 4 0 3 0 0 1 2 2 4 0 3 1 1 3 5 7 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMM316ZR#1\L22815\159..2798\2640\g431577\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zf) envelope glycoprotein andnef protein genes, complete cds and 5'end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431577" 5 2 0 0 25 21 14 16 10 9 13 22 11 5 2 14 6 8 28 15 5 32 17 5 2 6 21 8 10 10 23 12 10 11 13 16 13 9 24 21 16 39 27 23 3 9 22 24 11 19 10 25 8 20 11 15 22 15 14 18 34 0 0 1 >SIVMM316ZS#1\L22816\159..2798\2640\g431580\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zg) envelope glycoprotein andnef protein genes, complete cds and 5'end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431580" 5 2 0 0 27 20 11 16 11 8 14 22 11 5 2 14 6 8 29 15 6 32 18 5 2 6 20 8 10 10 22 12 10 11 13 17 13 8 22 20 15 40 26 24 3 8 23 25 12 18 10 27 8 19 11 16 22 15 14 18 34 0 0 1 >SIVMM316ZT#1\L22817\159..2798\2640\g431583\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zh) envelope glycoprotein andnef protein genes, complete cds and 5' end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431583" 5 2 1 0 25 20 11 16 11 9 14 22 11 6 2 14 6 9 28 15 5 32 17 5 2 6 21 8 10 10 23 12 10 11 13 16 13 9 22 22 15 39 25 24 3 10 23 24 12 19 10 26 8 19 10 15 22 15 14 18 34 0 0 1 >SIVMM316ZV#1\L22819\159..2798\2640\g431588\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zj) envelope glycoprotein andnef protein genes, complete cds and 5'end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431588" 5 2 0 0 26 21 13 16 11 9 13 22 11 5 2 14 6 8 28 15 5 31 17 5 2 6 22 9 10 11 24 11 9 11 12 15 13 9 22 22 16 39 25 25 3 9 23 24 11 19 10 26 8 19 11 15 22 15 14 18 34 0 0 1 >SIVMM316ZW#1\L22820\159..2798\2640\g431591\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm361zk) envelope glycoprotein andnef protein genes, complete cds and 5'end./codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431591" 5 2 0 0 26 20 13 16 11 9 13 22 11 5 2 13 6 8 28 14 5 32 17 5 2 6 20 9 10 11 23 12 10 11 13 16 13 9 22 22 16 39 26 24 3 9 22 25 11 19 10 26 8 19 11 15 23 15 14 18 34 0 0 1 >SIVMM316ZX#1\L22821\159..2798\2640\g431594\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm132zk) envelope glycoprotein andnef protein genes, complete cds and 5'end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431594" 5 2 0 0 26 20 12 16 11 10 13 22 11 5 2 14 6 8 28 15 6 32 18 5 2 6 21 8 10 11 23 12 10 11 13 16 13 8 21 21 17 39 26 24 3 9 24 24 11 18 10 26 8 19 11 14 23 15 14 17 34 0 0 1 >SIVMM316ZY#1\L22822\159..2798\2640\g431597\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zl) envelope glycoprotein andnef protein genes, complete cds and 5'end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431597" 6 2 0 0 26 20 12 16 11 9 13 22 11 5 2 14 6 8 28 15 6 32 17 5 2 6 20 8 10 11 22 12 11 11 13 16 13 8 22 22 15 39 25 25 3 9 22 25 12 19 10 26 8 19 11 15 23 15 14 17 34 0 0 1 >SIVMM316ZZ#1\L22823\159..2798\2640\g431600\Simian immunodeficiency virus\Simian immunodeficiency virus (Mm316zm) envelope glycoprotein andnef protein genes, complete cds and 5'end./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g431600" 5 2 0 0 26 20 13 16 11 9 13 22 10 5 2 14 7 8 27 15 5 32 18 5 2 6 22 8 10 10 23 12 10 11 12 16 14 9 22 22 15 39 26 24 3 9 23 24 11 19 10 26 8 19 11 15 22 15 14 18 34 0 0 1 >SIVMM32H#1\D01065\1054..2586\1533\g222607\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="gag"/codon_start=1/product="gag polyprotein"/db_xref="PID:d1001326"/db_xref="PID:g222607" 1 1 0 0 20 6 5 3 14 4 13 7 6 1 1 3 7 2 11 2 2 6 27 7 2 2 20 6 3 10 24 8 5 5 12 6 12 1 21 18 9 14 20 19 7 4 21 13 9 10 7 5 7 7 2 7 6 5 10 14 10 0 1 0 >SIVMM32H#2\D01065\2229..5411\3183\g2160378\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="pol"/function="protease, reverse transcriptase, endonuclease"/codon_start=1/product="pol polyprotein"/db_xref="PID:d1001327"/db_xref="PID:g2160378" 1 0 1 0 29 17 18 6 10 2 29 14 16 4 1 6 5 9 30 15 1 13 30 13 3 10 39 9 0 17 43 8 23 10 38 8 11 16 54 37 10 29 34 27 10 17 63 24 17 30 10 17 4 9 10 24 44 12 20 25 28 0 1 0 >SIVMM32H#3\D01065\5341..5985\645\g222609\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="vif"/function="virion infectivity factor"/codon_start=1/product="vif protein"/db_xref="PID:d1001328"/db_xref="PID:g222609" 1 0 0 0 11 10 4 2 6 1 3 3 1 2 0 0 5 5 5 4 0 3 6 3 2 2 7 0 1 3 9 1 2 2 6 4 2 3 8 6 2 2 3 7 0 6 5 5 3 3 3 9 5 0 3 3 5 2 1 2 12 0 0 1 >SIVMM32H#4\D01065\5813..6151\339\g222610\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:d1001329"/db_xref="PID:g222610" 0 0 0 0 6 3 5 0 0 0 2 1 2 0 0 1 1 1 2 0 0 0 4 2 0 6 2 1 1 1 7 1 4 0 4 0 0 1 2 2 4 0 4 1 2 2 6 6 0 2 3 1 1 3 2 1 2 1 1 3 5 1 0 0 >SIVMM32H#5\D01065\6152..6457\306\g222611\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:d1001330"/db_xref="PID:g222611" 1 1 0 0 6 1 2 4 2 2 1 1 1 1 0 1 0 0 0 1 0 2 3 1 1 4 2 0 1 1 6 4 1 1 1 0 2 1 2 0 1 4 3 0 1 4 11 2 1 2 0 1 1 0 2 1 1 3 1 2 2 1 0 0 >SIVMM32H#6\D01065\join(6303..6598,8804..8900)\393\g222605\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:d1001332"/db_xref="PID:g222605" 1 2 1 0 4 2 2 1 1 2 1 2 5 3 1 4 0 0 4 2 1 2 2 2 1 2 4 1 3 3 0 3 2 0 0 0 2 0 4 9 6 1 2 3 1 1 3 11 0 1 2 3 6 4 0 2 2 1 1 1 0 0 1 0 >SIVMM32H#7\D01065\join(6303..6598,8801..8900)\396\g222603\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="tat"/function="transactivation"/codon_start=1/product="tat protein"/db_xref="PID:d1001331"/db_xref="PID:g222603" 1 2 1 0 5 2 2 1 1 2 1 2 5 3 1 4 0 0 4 2 1 2 2 2 1 2 4 1 3 3 0 3 2 0 0 0 2 0 3 9 7 1 2 3 1 1 3 11 0 1 2 3 6 4 0 2 2 1 1 1 0 0 1 0 >SIVMM32H#8\D01065\join(6529..6598,8804..9057)\324\g222606\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:d1001334"/db_xref="PID:g222606" 1 0 2 0 7 5 2 3 3 3 0 2 1 0 1 0 2 2 3 1 1 3 6 1 1 5 1 2 0 3 1 2 0 0 0 0 0 0 1 0 3 2 4 5 1 2 4 3 2 4 0 2 1 0 0 1 3 1 1 1 2 0 0 1 >SIVMM32H#9\D01065\join(6529..6598,8801..9057)\327\g222604\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:d1001333"/db_xref="PID:g222604" 1 0 2 0 7 5 2 3 3 3 0 2 1 0 1 0 2 2 4 1 1 3 6 1 1 5 1 2 0 3 1 2 0 0 0 0 0 0 1 0 2 2 4 5 1 2 4 3 3 4 0 2 1 0 0 1 3 1 1 1 2 0 0 1 >SIVMM32H#10\D01065\6605..9241\2637\g222612\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="env"/codon_start=1/product="env polyprotein"/db_xref="PID:d1001335"/db_xref="PID:g222612" 4 2 2 0 28 19 11 16 11 9 14 23 8 5 2 14 6 8 28 14 5 36 21 4 2 7 21 7 10 8 23 14 10 10 11 16 12 9 18 21 14 37 28 22 3 9 23 25 13 23 11 25 9 18 12 14 22 15 14 18 34 0 0 1 >SIVMM32H#11\D01065\9075..9866\792\g222613\Simian immunodeficiency virus\Simian (macaque) immunodeficiency virus proviral DNA./gene="nef"/function="negative regulatory factor"/codon_start=1/product="nef protein"/db_xref="PID:d1001336"/db_xref="PID:g222613" 2 1 2 1 14 4 6 3 3 2 7 4 4 4 2 2 2 2 2 2 0 6 11 2 0 1 7 1 1 5 12 5 6 1 6 1 2 4 6 10 2 4 3 7 0 3 11 14 5 14 10 6 0 1 0 4 2 2 3 9 7 0 0 1 >SIVMMP11#1\M72323\403..795\393\g334680\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate MM251) tat, rev and nefgenes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g334680" 1 2 1 0 4 2 1 2 1 3 2 2 4 2 1 4 0 0 4 2 1 2 2 2 1 2 4 1 3 3 1 2 2 0 0 0 2 0 4 9 6 1 2 3 1 1 3 11 0 1 2 3 6 4 0 2 2 1 1 1 0 0 1 0 >SIVMMP11#2\M72323\479..952\474\g334681\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate MM251) tat, rev and nefgenes, complete cds./gene="rev1"/codon_start=1/db_xref="PID:g334681" 1 0 3 1 7 8 2 6 3 3 1 3 2 1 1 1 2 4 3 4 2 3 7 1 1 5 1 4 0 6 2 1 1 0 1 0 0 3 4 1 4 2 5 6 1 3 4 2 3 6 1 3 1 0 1 2 4 1 3 2 4 0 0 1 >SIVMMP11#3\M72323\970..1752\783\g334682\Simian immunodeficiency virus\Simian immunodeficiency virus (isolate MM251) tat, rev and nefgenes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g334682" 1 2 2 1 13 5 6 2 3 2 7 4 6 5 1 2 2 1 1 2 0 8 9 1 1 2 7 1 2 4 11 6 6 1 4 1 2 4 8 9 2 4 3 7 0 3 10 13 4 14 9 6 0 1 0 4 4 2 3 9 7 0 0 1 >SIVMNDGB1#1\M27470 X15781\450..1958\1509\g334686\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="gag"/codon_start=1/product="gag polyprotein"/db_xref="PID:g334686" 0 0 0 0 18 8 3 5 6 2 15 10 6 2 1 3 3 7 13 1 0 10 13 1 3 12 21 4 0 7 19 4 12 7 16 4 5 3 27 16 3 17 23 20 2 9 23 12 3 17 1 9 5 10 6 7 11 7 5 15 10 0 1 0 >SIVMNDGB1#3\M27470 X15781\4728..5246\519\g334688\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334688" 0 0 0 0 11 3 1 2 1 0 6 3 0 0 0 2 2 4 1 0 0 5 4 1 1 1 7 2 0 2 3 1 1 1 6 2 4 5 6 1 0 4 2 3 1 6 8 8 3 1 0 7 4 3 1 5 10 2 1 5 9 0 0 1 >SIVMNDGB1#4\M27470 X15781\5227..5541\315\g334689\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334689" 0 0 0 0 8 2 3 1 1 0 2 0 3 0 0 0 0 1 1 2 0 1 3 3 0 2 3 2 0 1 4 1 2 0 2 1 1 0 1 3 1 3 5 2 2 0 7 6 0 5 1 1 0 3 3 1 1 1 3 3 2 1 0 0 >SIVMNDGB1#5\M27470 X15781\join(5471..5730,7950..8037)\348\g334684\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g334684" 1 0 0 1 1 4 1 0 2 1 1 1 2 0 0 1 1 1 2 2 1 2 1 1 0 4 2 1 0 4 2 2 1 3 1 1 0 0 5 8 2 2 4 3 2 2 5 5 2 2 2 4 6 2 0 3 4 1 0 2 1 0 1 0 >SIVMNDGB1#6\M27470 X15781\join(5590..5677,7950..8167)\306\g334685\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g334685" 1 0 1 0 8 2 2 1 3 8 0 4 2 0 1 1 2 0 1 2 2 1 2 0 1 2 2 1 0 3 4 0 1 0 1 0 2 0 3 2 0 3 5 5 0 0 7 1 1 1 0 1 1 2 1 1 1 2 0 2 1 0 0 1 >SIVMNDGB1#7\M27470 X15781\5661..8126\2466\g334690\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="env"/codon_start=1/product="env polyprotein"/db_xref="PID:g334690" 2 2 1 1 15 15 9 5 8 8 29 14 14 7 3 10 8 12 33 8 1 23 12 2 0 13 15 5 1 9 29 7 5 6 22 6 18 7 27 34 14 38 23 18 5 12 40 20 10 20 7 26 6 20 6 20 30 5 12 22 21 0 0 1 >SIVMNDGB1#8\M27470 X15781\8170..8814\645\g334691\Simian immunodeficiency virus\Simian immunodeficiency virus, complete genome./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334691" 1 2 2 1 5 1 1 3 6 1 7 4 6 5 2 3 2 0 5 3 1 2 5 1 2 5 4 0 0 4 12 2 4 3 0 0 4 5 5 7 2 2 5 9 1 3 13 8 4 7 4 7 0 2 2 5 5 2 0 3 4 1 0 0 >SIVMNE#1\M32741\533..2053\1521\g334696\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334696" 1 1 0 0 18 6 7 3 12 4 12 8 5 1 1 3 7 3 12 4 2 6 27 7 2 2 22 6 1 8 20 11 8 4 12 5 10 1 22 17 9 13 22 18 7 4 21 14 7 9 7 5 7 7 2 8 5 4 10 16 10 0 1 0 >SIVMNE#3\M32741\4808..5452\645\g334698\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334698" 1 0 0 0 13 9 4 2 6 1 3 3 1 1 0 1 5 5 5 5 0 3 6 3 2 2 7 1 1 2 6 1 2 1 6 3 3 3 9 6 2 3 5 6 0 6 6 5 3 4 2 6 5 1 3 3 5 2 1 2 12 0 0 1 >SIVMNE#4\M32741\5280..5618\339\g334699\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334699" 0 0 0 0 7 2 4 0 0 0 2 2 1 0 1 1 1 1 2 0 0 0 4 2 0 6 3 1 0 1 7 1 4 0 3 0 0 1 1 3 4 0 4 1 1 3 6 6 0 2 3 1 1 3 2 1 3 1 1 3 5 1 0 0 >SIVMNE#5\M32741\5619..5924\306\g334700\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334700" 0 1 1 0 6 1 2 4 2 2 1 1 1 0 0 3 0 0 0 2 0 2 3 1 1 3 1 0 2 1 6 4 0 1 1 0 1 1 3 0 0 3 3 0 2 3 10 3 1 3 0 1 1 0 2 1 1 3 1 3 2 1 0 0 >SIVMNE#6\M32741\join(5770..6065,8280..8376)\393\g334693\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334693" 0 3 0 0 5 3 3 1 1 2 1 2 5 3 1 4 0 0 4 1 1 3 1 3 1 2 4 1 2 4 0 3 2 0 0 0 2 0 4 8 4 2 2 4 1 1 5 9 1 0 2 3 7 3 0 2 2 1 0 1 0 0 1 0 >SIVMNE#7\M32741\join(5996..6065,8280..8533)\324\g334694\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334694" 1 0 2 0 6 5 2 3 3 3 0 2 1 0 0 0 2 2 3 1 1 2 6 0 3 5 2 2 0 1 1 1 0 0 0 0 0 1 0 0 4 3 4 5 2 2 4 3 3 3 0 2 0 0 0 1 3 1 3 1 2 0 0 1 >SIVMNE#9\M32741\join(6072..8276,8280..8717)\2643\g334695\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334695" 5 2 2 0 29 16 13 13 10 8 14 23 8 5 2 12 9 7 27 17 6 32 22 3 1 9 22 7 8 10 26 11 9 8 12 15 13 10 22 18 13 44 26 22 2 11 26 25 11 19 12 24 9 18 13 16 23 17 14 16 33 0 0 1 >SIVMNE#10\M32741\8551..9342\792\g334701\Simian immunodeficiency virus\Simian immunodeficiency virus (SIV) complete proviral genome./codon_start=1/db_xref="PID:g334701" 2 0 2 1 11 5 5 4 4 0 8 4 4 4 4 2 3 2 1 2 0 7 10 1 0 4 5 1 1 4 13 5 5 2 6 1 1 3 9 9 1 7 3 7 0 3 14 13 5 11 10 5 0 1 0 5 5 2 2 6 8 0 0 1 >SIVNEF#2\L28171\115..1170\1056\g506844\Simian immunodeficiency virus\Simian immunodeficiency virus glycoprotein 120 (gp120),glycoprotein 41 (gp41), tat, rev and nef genes, partial cds's./gene="gp41"/codon_start=1/product="glycoprotein 41"/db_xref="PID:g506844" 4 2 1 0 11 8 8 10 8 4 6 11 0 3 2 5 4 1 3 6 1 13 8 2 1 1 6 4 9 4 8 6 5 5 6 7 6 3 1 10 4 5 18 15 1 3 9 13 8 1 3 10 2 1 8 4 12 6 4 4 17 0 0 1 >SIVNEF#3\L28171\1004..1795\792\g506845\Simian immunodeficiency virus\Simian immunodeficiency virus glycoprotein 120 (gp120),glycoprotein 41 (gp41), tat, rev and nef genes, partial cds's./gene="nef"/codon_start=1/db_xref="PID:g506845" 1 1 2 1 15 3 4 3 4 2 7 4 6 4 1 3 2 2 2 2 0 6 10 1 1 2 6 1 1 4 13 5 5 1 4 1 2 4 6 9 2 5 3 7 0 5 13 13 6 12 10 4 0 2 0 4 6 2 3 7 8 0 0 1 >SIVP209C14\L20099\1..2670\2670\g435611\Simian immunodeficiency virus\Simian immunodeficiency virus envelope glycoprotein (env) gene,complete cds./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g435611"/IGNORED_CODON=1 4 3 2 1 29 21 13 14 10 7 13 23 13 5 3 7 8 10 33 15 6 23 19 7 2 9 20 4 11 12 20 10 12 13 18 13 14 11 20 23 9 43 26 24 4 8 32 21 11 18 10 24 7 21 11 15 22 15 15 16 35 0 0 1 >SIVP209C15\L20009\1..2661\2661\g435613\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 15 of patient 209), env gene./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g435613" 5 3 2 1 34 19 14 14 10 7 13 23 11 6 3 10 9 12 27 15 4 24 16 7 2 9 22 4 9 14 21 11 12 12 16 13 15 10 19 20 7 43 25 29 3 9 31 23 13 18 11 23 6 20 8 16 22 14 14 19 34 0 0 1 >SIVP209C19\L20008\1..2661\2661\g435615\Simian immunodeficiency virus\Simian immunodeficiency virus type 1 envelope glycoprotein (env)gene, complete cds./gene="env"/codon_start=1/product="envelope glycoprotein"/db_xref="PID:g435615" 3 3 2 1 34 18 14 14 10 7 12 23 11 6 3 7 9 11 29 14 5 22 19 7 2 9 22 4 10 14 21 10 11 13 18 13 14 10 21 20 8 44 26 28 3 7 31 23 12 18 9 24 6 21 10 16 22 14 17 16 35 0 0 1 >SIVREEA02#1\M62884\join(M62883:177..436,351..441)\351\g334740\Simian immunodeficiency virus\Simian immunodeficiency virus tat gene, exon 3 and complete cds,rev gene, exon 3 and complete cds, and nef gene, 5' end./gene="tat"/codon_start=1/db_xref="PID:g334740" 1 0 0 1 1 4 1 1 2 1 2 1 1 0 0 0 1 0 2 2 1 2 1 0 0 4 2 0 0 4 3 2 1 4 0 1 0 0 5 8 3 2 3 3 1 4 5 5 2 2 2 3 8 2 1 3 4 1 0 2 1 0 1 0 >SIVREEA02#2\M62884\join(M62883:367..436,351..571)\291\g334741\Simian immunodeficiency virus\Simian immunodeficiency virus tat gene, exon 3 and complete cds,rev gene, exon 3 and complete cds, and nef gene, 5' end./gene="rev"/codon_start=1/db_xref="PID:g334741" 1 0 1 0 10 1 3 1 1 6 0 2 1 0 1 2 2 0 2 1 1 1 0 1 1 1 3 2 0 3 5 0 1 0 1 0 4 0 1 4 1 2 4 5 0 0 7 0 2 1 2 0 1 1 0 1 2 2 0 1 0 0 0 1 >SIVREV#1\L40990\942..2501\1560\g727180\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="gag"/codon_start=1/db_xref="PID:g727180" 1 4 1 0 15 8 8 6 6 5 15 3 6 2 1 2 2 5 17 4 1 4 22 4 4 9 20 6 7 4 25 5 12 3 14 3 10 3 28 14 9 11 24 13 5 6 27 11 11 7 6 8 9 6 8 5 8 10 3 14 9 1 0 0 >SIVREV#2\L40990\2216..5365\3150\g727181\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="pol"/codon_start=1/db_xref="PID:g727181" 1 3 0 0 33 14 16 4 7 11 31 16 8 6 0 3 5 11 37 16 2 8 35 5 1 16 37 12 3 7 51 5 21 7 36 13 13 8 76 20 12 27 41 22 7 8 69 25 18 24 12 18 6 7 6 16 47 18 18 17 33 1 0 0 >SIVREV#3\L40990\5268..5963\696\g727182\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="vif"/codon_start=1/db_xref="PID:g727182" 1 0 0 0 12 8 2 1 4 3 5 3 5 1 0 3 2 2 7 3 1 3 4 3 0 1 3 5 0 4 17 3 2 0 3 3 1 1 9 3 2 4 9 7 3 4 8 5 4 2 6 4 2 2 4 3 9 3 3 9 10 0 1 0 >SIVREV#4\L40990\5746..6105\360\g727183\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="vpr"/codon_start=1/db_xref="PID:g727183" 0 0 1 3 11 4 2 4 0 1 2 1 1 0 0 0 0 0 0 0 1 0 5 2 0 1 2 3 1 1 7 1 2 2 1 0 0 3 2 0 3 2 2 4 0 2 9 6 2 4 2 3 0 3 3 2 0 1 0 3 4 0 1 0 >SIVREV#5\L40990\join(6056..6273,8515..8656)\360\g727184\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g727184" 2 1 0 1 7 2 3 1 2 2 0 1 0 2 0 1 1 1 3 4 2 1 0 0 1 2 3 1 0 2 2 3 1 1 0 0 2 3 4 9 1 2 4 8 2 1 2 6 5 1 0 3 3 4 0 2 1 0 2 1 0 0 0 1 >SIVREV#6\L40990\join(6213..6273,8515..8723)\270\g727185\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="rev"/codon_start=1/db_xref="PID:g727185" 1 1 0 0 7 6 2 3 1 2 0 3 1 0 0 1 1 0 1 1 2 0 3 2 0 3 1 3 0 2 1 0 1 0 0 0 2 1 2 0 2 2 5 3 2 0 4 4 3 0 0 2 0 0 2 0 1 2 0 1 2 0 1 0 >SIVREV#7\L40990\6280..8913\2634\g727186\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="env"/codon_start=1/product="envelope"/db_xref="PID:g727186" 5 3 2 2 23 12 13 5 11 15 19 16 14 4 2 16 10 10 28 14 8 12 22 7 2 4 26 11 3 18 28 7 9 10 21 10 10 10 33 15 20 44 23 24 6 13 31 20 4 21 8 26 13 15 13 12 23 15 9 14 33 0 1 0 >SIVREV#8\L40990\8169..8408\240\g727187\Simian immunodeficiency virus\Simian immunodeficiency virus (clone 2) gag, pol, vif, vpr, tat,rev, envelope (env) and nef genes, complete cds./gene="nef"/codon_start=1/db_xref="PID:g727187" 1 0 0 0 6 1 1 1 3 1 0 3 2 0 0 1 1 2 4 1 0 0 0 0 0 0 3 1 0 1 3 0 0 1 0 2 1 4 7 3 1 0 2 0 1 4 2 0 3 1 1 0 1 0 0 2 0 1 1 4 1 1 0 0 >SIVREVAAA#1\M65864\3..398\396\g334744\Simian immunodeficiency virus\Simian immunodeficiency virus (rhesus macaques) (SIVmac) tat andrev genes, complete cds./gene="tat"/codon_start=1/db_xref="PID:g334744" 1 1 0 0 5 3 2 1 1 2 2 2 5 4 0 4 1 0 4 1 1 3 2 2 1 2 5 1 2 4 0 3 3 0 0 0 2 0 4 8 5 2 1 5 2 1 5 7 0 0 2 3 6 4 0 2 2 1 0 1 0 0 1 0 >SIVREVAAA#2\M65864\229..555\327\g334745\Simian immunodeficiency virus\Simian immunodeficiency virus (rhesus macaques) (SIVmac) tat andrev genes, complete cds./gene="rev1"/codon_start=1/db_xref="PID:g334745" 1 0 2 0 7 5 2 3 3 3 0 2 1 0 1 0 1 3 2 1 2 3 7 0 1 5 1 2 0 4 1 1 0 0 0 0 0 0 1 1 2 1 4 4 1 2 4 3 3 5 0 2 2 0 0 1 4 1 1 1 1 0 0 1 >SIVSMMPBJA#1\M31325\828..2351\1524\g334756\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g334756" 0 1 1 0 22 6 8 4 10 5 12 8 4 2 0 2 4 4 12 1 2 8 22 7 5 6 21 5 3 8 20 9 7 8 10 4 10 3 23 15 9 15 24 13 6 4 22 13 8 9 6 6 6 8 2 7 9 3 11 14 10 0 1 0 >SIVSMMPBJA#2\M31325\2108..5176\3069\g334757\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="pol"/codon_start=1/product="pol polyprotein"/db_xref="PID:g334757" 1 0 1 0 35 10 20 2 12 3 28 12 13 7 1 3 5 8 27 17 1 14 25 13 4 13 38 10 2 13 45 11 16 9 43 9 11 8 59 23 11 28 34 27 5 19 67 22 11 33 8 18 4 6 13 22 39 11 25 21 26 0 1 0 >SIVSMMPBJA#3\M31325\5106..5750\645\g334758\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334758" 3 0 0 0 9 5 5 2 7 1 2 3 2 2 0 1 5 3 4 2 0 7 5 3 2 1 5 2 1 4 7 3 2 1 6 2 4 2 9 7 3 8 0 8 1 7 6 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIVSMMPBJA#4\M31325\5578..5916\339\g334759\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334759" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 1 1 2 0 0 1 3 2 1 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 0 4 7 3 2 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIVSMMPBJA#5\M31325\5918..6223\306\g334760\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334760" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 2 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 1 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIVSMMPBJA#6\M31325\join(6069..6358,8597..8693)\387\g334754\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g334754" 1 1 1 0 5 2 3 1 1 3 1 2 4 5 1 4 1 1 3 0 1 3 2 1 1 1 4 2 1 1 1 3 0 0 0 0 3 0 3 10 2 1 3 3 1 2 3 13 2 2 2 3 4 5 0 1 1 1 1 1 0 0 1 0 >SIVSMMPBJA#7\M31325\join(6295..6358,8597..8835)\303\g334755\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g334755" 1 0 1 0 8 5 2 2 2 2 0 5 1 0 0 0 3 1 1 0 1 1 6 1 2 4 2 3 0 4 1 0 1 0 0 0 0 1 0 1 3 1 2 6 0 2 4 3 3 3 0 2 0 0 0 1 2 1 2 1 2 0 0 1 >SIVSMMPBJA#8\M31325\6365..9034\2670\g334761\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334761" 5 3 1 2 31 17 12 15 11 7 13 23 13 6 2 7 9 10 40 13 6 24 21 7 1 8 19 7 9 14 23 9 9 14 18 12 13 11 23 16 13 42 26 30 2 7 34 16 11 16 7 26 8 20 12 14 23 12 16 15 35 0 0 1 >SIVSMMPBJA#9\M31325\8868..9653\786\g334762\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus infectious clone 4.41, completegenome./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334762" 0 1 0 2 11 3 1 4 3 1 7 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 4 7 5 6 5 4 3 3 2 8 11 3 4 8 6 1 4 13 9 6 10 8 6 0 3 1 6 5 2 1 8 8 1 0 0 >SIVSMMPBJB#1\L03295\829..2352\1524\g334765\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g334765" 0 1 1 0 21 7 7 4 10 5 12 8 5 2 0 2 5 3 12 1 2 8 22 7 5 6 19 5 4 9 20 9 7 8 10 4 10 3 23 16 9 15 24 12 5 5 22 13 8 9 6 6 6 8 2 7 9 3 11 14 10 0 1 0 >SIVSMMPBJB#2\L03295\2109..5177\3069\g334766\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="pol"/codon_start=1/product="pol polyprotein"/db_xref="PID:g334766" 1 0 1 0 35 10 19 2 13 3 29 11 13 8 1 4 6 8 26 17 1 13 25 13 4 13 37 10 3 13 45 11 16 9 43 9 11 9 59 23 11 28 34 27 5 19 66 22 11 33 7 18 4 6 13 22 39 12 24 21 26 0 1 0 >SIVSMMPBJB#3\L03295\5107..5751\645\g334767\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334767" 3 0 0 0 9 5 5 2 7 1 2 3 2 2 0 1 5 3 4 2 0 7 5 3 2 1 4 2 1 4 7 3 2 1 7 2 4 2 9 7 3 8 0 8 1 7 6 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIVSMMPBJB#4\L03295\5579..5917\339\g334768\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334768" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 1 1 2 0 0 1 3 2 1 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 0 3 7 3 2 2 4 1 3 1 2 1 3 1 1 5 5 1 0 0 >SIVSMMPBJB#5\L03295\5919..6224\306\g334769\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334769" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 2 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 1 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIVSMMPBJB#6\L03295\join(6070..6359,8598..8694)\387\g334764\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g334764" 0 1 2 0 5 2 3 1 1 3 1 2 4 5 1 4 1 1 3 0 1 3 2 1 1 1 4 2 1 1 1 3 0 0 0 0 3 0 2 11 2 1 3 3 1 2 3 13 2 2 3 2 4 5 0 1 1 1 1 1 0 0 1 0 >SIVSMMPBJB#8\L03295\6366..9035\2670\g334770\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334770" 5 3 1 2 31 16 12 15 11 8 13 23 13 6 2 7 8 10 39 14 6 24 21 7 1 8 19 7 9 14 23 10 9 14 19 13 12 11 24 16 13 41 26 30 3 7 33 16 10 17 7 26 8 20 12 13 23 11 16 15 36 0 0 1 >SIVSMMPBJB#9\L03295\8869..9654\786\g334771\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-infectious clone 1.5,complete genome./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334771" 0 1 0 2 11 3 1 4 3 1 7 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 4 6 5 6 6 4 3 3 2 8 11 4 3 8 6 1 4 13 8 7 10 8 6 0 3 1 6 5 2 1 8 8 1 0 0 >SIVSMMPBJC#2\L03296\205..849\645\g334776\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone B, 3' halfof genome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334776" 3 0 0 0 8 5 5 2 7 1 2 3 2 2 0 1 5 3 5 2 0 6 5 3 2 1 5 2 1 5 7 3 2 1 6 2 4 2 9 8 3 8 0 8 1 7 5 7 2 3 2 6 4 1 4 3 4 3 0 1 12 0 0 1 >SIVSMMPBJC#3\L03296\677..1015\339\g334777\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone B, 3' halfof genome./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334777" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 0 2 2 0 0 1 4 2 0 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 1 4 6 4 1 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIVSMMPBJC#4\L03296\1017..1322\306\g334778\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone B, 3' halfof genome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334778" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 1 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 2 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIVSMMPBJC#7\L03296\1464..3785\2322\g334779\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone B, 3' halfof genome./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334779" 4 0 1 0 25 11 9 7 8 5 13 18 13 6 2 7 5 11 40 12 6 20 17 7 1 7 16 5 6 13 21 10 7 14 17 11 12 10 23 15 11 41 23 22 3 6 30 13 11 17 5 24 6 20 9 13 19 7 15 16 27 0 1 0 >SIVSMMPBJD#2\L03297\205..849\645\g334785\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone P, 3' halfof genome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334785" 3 0 0 0 8 5 5 2 7 1 2 3 2 2 0 1 5 3 5 2 0 6 5 3 2 1 5 3 1 4 7 3 2 1 6 2 4 2 9 8 3 8 0 8 1 7 5 7 2 3 2 6 4 1 4 3 4 3 0 1 12 0 0 1 >SIVSMMPBJD#3\L03297\677..1015\339\g334786\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone P, 3' halfof genome./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334786" 1 0 0 0 4 5 3 0 0 0 1 2 2 1 1 0 0 2 2 0 0 1 4 2 0 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 1 4 6 4 1 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIVSMMPBJD#4\L03297\1017..1322\306\g334787\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone P, 3' halfof genome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334787" 0 1 0 0 8 1 1 4 2 2 1 1 1 2 0 1 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 1 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 2 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIVSMMPBJD#7\L03297\1464..3785\2322\g334788\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus non-pathogenic clone P, 3' halfof genome./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334788" 4 0 1 0 24 12 9 7 8 5 13 18 13 6 2 7 5 11 40 12 6 20 17 7 1 7 16 5 6 13 21 10 7 14 18 11 11 10 23 15 11 41 24 22 2 6 30 13 11 17 6 23 6 20 9 13 20 7 15 15 27 0 1 0 >SIVSMMPBJE#2\L03298\205..849\645\g334794\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334794" 3 0 0 0 9 5 5 2 7 1 2 3 2 2 0 1 5 3 4 2 0 7 5 3 2 1 5 2 1 4 7 3 2 1 6 2 4 2 9 7 3 8 0 8 1 7 6 7 2 3 1 7 4 1 4 3 4 3 0 1 12 0 0 1 >SIVSMMPBJE#3\L03298\677..1015\339\g334795\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334795" 1 0 0 0 4 5 3 0 0 0 1 3 2 1 0 0 1 1 2 0 0 1 3 2 1 6 4 1 0 1 6 1 5 0 1 2 1 0 3 1 2 1 0 2 0 4 7 3 2 2 4 0 3 1 2 1 3 1 1 5 5 1 0 0 >SIVSMMPBJE#4\L03298\1017..1322\306\g334796\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334796" 0 1 0 0 8 1 1 4 2 2 1 1 1 1 0 2 0 0 1 1 0 2 2 1 2 3 2 2 1 0 7 2 0 2 2 0 1 1 1 0 2 1 0 3 1 3 10 2 1 4 0 2 1 0 2 1 2 4 1 1 2 1 0 0 >SIVSMMPBJE#5\L03298\join(1168..1457,3696..3792)\387\g334791\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g334791" 1 1 1 0 5 2 3 1 1 3 1 2 4 5 1 4 1 1 3 0 1 3 2 1 1 1 4 2 1 1 1 3 0 0 0 0 3 0 3 10 2 1 3 3 1 2 3 13 2 2 2 3 4 5 0 1 1 1 1 1 0 0 1 0 >SIVSMMPBJE#6\L03298\join(1394..1457,3696..3934)\303\g334792\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g334792" 1 0 1 0 8 5 2 2 2 2 0 5 1 0 0 0 3 1 1 0 1 1 6 1 2 4 2 3 0 4 1 0 1 0 0 0 0 1 0 1 3 1 2 6 0 2 4 3 3 3 0 2 0 0 0 1 2 1 2 1 2 0 0 1 >SIVSMMPBJE#7\L03298\1464..4133\2670\g334797\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334797" 5 3 1 2 31 16 12 15 11 7 13 23 13 6 2 6 7 10 40 13 6 25 21 7 1 8 19 7 9 14 23 10 9 14 18 12 13 11 23 16 14 40 26 30 2 7 34 17 11 17 6 26 9 20 12 14 23 12 16 15 36 0 0 1 >SIVSMMPBJE#8\L03298\3967..4752\786\g334798\Simian immunodeficiency virus\Simian immunodeficiency PBJ virus pathogenic clone 9, 3' half ofgenome./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334798" 0 1 0 2 11 3 1 4 3 1 7 7 5 2 1 3 3 3 5 3 0 2 8 2 1 3 9 0 1 4 7 5 6 5 4 3 3 2 8 11 3 4 8 6 1 4 13 9 6 10 8 6 0 3 1 6 5 2 1 8 8 1 0 0 >SIVSTM#1\M83293\709..2232\1524\g334801\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="gag"/codon_start=1/product="gag protein"/db_xref="PID:g334801" 1 0 3 0 16 5 6 2 12 3 11 11 7 1 0 1 6 6 8 3 3 9 25 7 4 5 22 7 2 5 12 12 14 6 11 7 12 3 25 15 5 16 23 15 5 6 22 14 9 6 8 3 4 10 5 7 6 4 7 14 10 0 1 0 >SIVSTM#3\M83293\4987..5631\645\g334803\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="vif"/codon_start=1/product="vif protein"/db_xref="PID:g334803" 1 0 1 0 11 7 3 2 5 0 6 2 1 1 0 2 4 3 4 4 1 5 6 3 1 1 5 2 2 4 8 3 3 2 3 2 7 3 8 7 3 4 2 6 2 7 8 6 1 3 1 6 5 1 3 3 5 1 2 1 11 0 0 1 >SIVSTM#4\M83293\5459..5797\339\g334804\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="vpx"/codon_start=1/product="vpx protein"/db_xref="PID:g334804" 2 0 0 0 6 3 2 0 1 0 1 4 1 0 0 1 2 1 0 0 1 0 2 4 2 5 5 0 0 1 6 2 4 0 2 1 0 1 2 1 3 0 1 2 1 4 5 7 1 2 2 2 3 0 2 1 4 0 1 3 5 0 1 0 >SIVSTM#5\M83293\5799..6104\306\g334805\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="vpr"/codon_start=1/product="vpr protein"/db_xref="PID:g334805" 1 2 1 0 5 1 1 3 2 2 0 3 0 1 0 0 1 0 1 1 0 2 4 1 1 3 2 2 1 0 7 3 0 2 1 0 2 1 1 1 1 1 2 2 3 2 6 4 1 4 0 2 1 0 2 1 2 2 2 2 2 1 0 0 >SIVSTM#6\M83293\join(5950..6239,8454..8553)\390\g1220520\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="tat"/codon_start=1/product="tat protein"/db_xref="PID:g1220520" 1 1 0 0 5 2 3 0 1 3 1 2 6 4 0 2 3 0 4 1 0 4 4 2 0 1 1 4 1 1 2 2 0 1 0 0 2 3 5 9 5 0 2 4 1 0 3 13 0 0 1 3 5 4 0 2 1 1 1 1 1 0 1 0 >SIVSTM#7\M83293\join(6176..6239,8454..8692)\303\g334800\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="rev"/codon_start=1/product="rev protein"/db_xref="PID:g334800" 0 0 0 0 7 5 2 2 2 4 1 3 1 0 0 1 1 1 3 0 1 1 6 2 1 3 2 2 0 2 1 1 1 0 1 0 0 0 1 1 3 3 8 4 0 1 2 2 2 6 1 1 0 0 0 2 1 2 0 1 2 0 1 0 >SIVSTM#8\M83293\6246..8894\2649\g334806\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="env"/codon_start=1/product="envelope polyprotein"/db_xref="PID:g334806" 2 3 2 2 33 19 13 8 10 10 15 24 6 10 3 8 7 7 32 16 7 27 19 4 1 10 29 6 8 12 25 10 12 9 22 18 9 6 23 17 17 39 27 19 4 7 36 16 12 16 11 23 14 16 11 14 16 19 12 16 33 0 0 1 >SIVSTM#9\M83293\8728..9522\795\g334807\Simian immunodeficiency virus\Simian (stump-tailed macaque) immunodeficiency virus, isolate STM,complete genome, proviral DNA./gene="nef"/codon_start=1/product="nef protein"/db_xref="PID:g334807" 1 1 2 0 11 2 7 2 5 2 2 7 5 2 1 3 3 1 4 2 0 3 11 0 1 3 10 2 1 2 10 4 8 3 7 1 1 4 6 13 3 5 3 9 2 8 15 12 5 11 5 6 0 1 0 6 5 0 1 7 7 0 0 1 >SIVW1GP120\M74936\1..1542\1542\g334841\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW1) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334841" 1 0 0 0 12 11 3 5 2 5 8 12 7 3 0 8 2 7 24 7 3 24 14 3 1 5 13 3 1 4 15 6 6 4 6 8 7 6 18 14 8 31 9 8 2 7 13 13 5 20 6 16 7 17 4 9 10 9 10 14 17 0 0 1 >SIVW2GP120\M74937\1..1542\1542\g334843\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW2) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334843" 1 0 0 0 12 11 3 5 2 5 7 11 8 2 0 8 2 7 25 8 3 23 14 3 1 5 13 3 1 4 16 6 4 4 6 8 7 7 19 13 8 31 9 8 2 7 13 14 5 20 7 15 7 17 5 9 10 8 9 15 17 0 0 1 >SIVW3GP120\M74938\1..1560\1560\g334845\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW3) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334845" 1 0 0 0 13 11 3 5 2 5 8 11 9 2 0 8 3 7 30 8 2 22 14 3 1 5 11 3 1 5 16 5 4 4 7 8 7 7 17 14 8 33 9 9 2 6 15 13 5 19 6 15 7 18 5 9 10 8 9 14 17 0 0 1 >SIVW4GP120\M74939\1..1542\1542\g334847\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW4) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334847" 1 0 0 0 12 11 3 5 2 5 8 12 7 2 0 8 2 7 25 7 3 23 14 3 1 5 13 3 1 4 16 6 4 4 6 8 7 7 19 13 8 31 9 8 2 7 13 14 5 20 7 15 7 17 5 9 10 9 9 14 17 0 0 1 >SIVW5GP120\M74940\1..1542\1542\g334849\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW5) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334849" 1 0 0 0 12 11 3 6 2 5 8 12 7 2 0 8 3 7 25 7 3 22 14 4 1 4 13 3 1 5 16 5 4 4 6 8 7 6 18 14 7 33 9 9 2 6 12 15 5 19 6 16 8 16 4 9 10 9 10 14 17 0 0 1 >SIVW6GP120\M74941\1..1542\1542\g334851\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW6) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334851" 1 0 0 0 12 10 3 5 2 5 8 12 7 2 0 8 2 7 25 7 3 23 14 3 1 5 13 3 1 4 16 6 5 4 6 8 7 7 18 15 7 32 9 8 2 7 14 12 5 20 7 15 7 17 5 9 10 9 9 14 17 0 0 1 >SIVW8GP120\M74943\1..1551\1551\g334855\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW8) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334855" 1 0 0 0 11 11 3 5 2 5 7 12 8 2 0 8 2 7 27 7 3 22 13 3 1 5 14 3 1 5 16 6 4 4 6 8 7 6 19 14 7 32 9 9 2 6 14 13 5 20 6 16 7 17 5 9 11 9 10 14 17 0 0 1 >SIVW9GP120\M74944\1..1542\1542\g334857\Simian immunodeficiency virus\Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, cloneW9) env gene, complete cds./gene="env"/codon_start=1/product="glycoprotein 120"/db_xref="PID:g334857" 1 0 0 0 12 11 3 5 2 5 8 12 7 2 0 8 2 9 25 7 3 23 14 3 1 5 13 3 1 4 16 6 4 3 6 9 7 6 19 14 8 30 9 8 2 7 12 14 5 20 6 16 7 17 5 9 10 8 10 14 17 0 0 1 .