>AB000785#2\AB000785\56..1006\951\g2506034\Shigella flexneri\Shigella flexneri gene for tRNA delta 2-isopentenylpyrophosphatetransferase, complete cds./gene="miaA"/codon_start=1/product="tRNA delta 2-isopentenylpyrophosphate transferase"/db_xref="PID:d1023495"/db_xref="PID:g2506034"/transl_table=11 3 5 5 7 2 2 2 2 10 6 6 11 4 3 5 2 3 3 0 2 9 1 5 0 10 2 8 10 15 7 2 3 6 9 4 1 3 8 5 5 1 1 6 12 2 6 16 8 5 12 4 4 2 0 3 6 2 7 10 8 5 0 0 1 >D82966\D82966\1..750\750\g1679580\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA for nonspecific phosphataseprecursor, complete cds./gene="phoN"/standard_name="phoN-Sf"/codon_start=1/product="nonspecific phosphatase precursor"/db_xref="PID:d1012322"/db_xref="PID:g1679580"/transl_table=11 2 1 1 4 3 1 0 1 9 4 7 3 5 2 1 6 1 6 9 2 3 2 4 0 4 5 13 4 1 8 3 3 4 7 4 1 3 4 10 3 2 13 4 6 2 2 8 2 6 9 2 7 1 1 3 7 2 1 11 4 2 1 0 0 >ECSHET2B\Z54211\complement(228..1925)\1698\g1109754\Shigella flexneri\S.flexneri senA gene (isolate 2457T)./gene="senA"/codon_start=1/evidence=experimental/product="ShET2 enterotoxin"/db_xref="PID:e199077"/db_xref="PID:g1109754"/transl_table=11 3 1 0 1 8 5 9 5 7 18 20 17 12 6 1 10 4 6 9 2 2 11 6 5 1 4 22 3 3 13 18 2 6 9 10 4 4 6 32 7 9 35 10 7 10 12 26 8 10 20 5 15 1 4 1 18 19 9 19 12 3 0 0 1 >SF2AETX1#1\Z47381\102..287\186\g791134\Shigella flexneri\S.flexneri 2a set1A and set1B genes for enterotoxin 1./gene="set1B"/codon_start=1/db_xref="PID:g791134"/transl_table=11 2 0 2 1 1 0 0 1 1 1 0 0 0 3 0 0 0 0 0 1 1 2 0 1 0 2 0 0 0 2 0 1 0 2 0 5 0 4 1 0 0 3 0 3 2 0 0 0 2 1 0 0 1 2 2 1 2 2 4 2 0 0 0 1 >SF2AETX1#2\Z47381\291..824\534\g791135\Shigella flexneri\S.flexneri 2a set1A and set1B genes for enterotoxin 1./gene="set1A"/codon_start=1/db_xref="PID:g791135"/transl_table=11 1 0 6 1 1 0 0 1 10 2 0 1 0 4 0 1 3 2 0 6 1 5 3 4 1 1 0 4 1 6 2 4 2 5 1 4 0 9 5 1 4 3 0 13 2 4 3 1 3 5 2 3 3 4 3 8 2 6 4 4 2 1 0 0 >SFGLPXG#1\Z11766 S47686\235..1245\1011\g47028\Shigella flexneri\S.flexneri glpX gene./gene="glpX"/function="unknown"/codon_start=1/db_xref="PID:g47028"/db_xref="SWISS-PROT:P28900"/transl_table=11 1 17 0 5 1 0 0 7 20 1 2 2 2 2 0 3 4 0 0 9 5 2 2 0 9 0 4 7 22 6 3 23 1 11 8 7 4 5 13 2 10 4 1 6 3 1 17 4 12 13 3 2 2 1 2 2 0 10 18 14 1 0 0 1 >SFIPAA\X17628\1..1902\1902\g47031\Shigella flexneri\Shigella flexneri 5 invasion plasmid ipaA gene for 70 kDd antigen./codon_start=1/db_xref="PID:g47031"/db_xref="SWISS-PROT:P18010"/transl_table=11 2 1 2 2 13 1 10 9 4 12 25 5 27 11 6 20 9 9 23 6 3 17 10 3 1 8 19 6 3 7 13 2 1 5 15 3 4 8 38 12 23 41 18 9 7 10 28 7 8 36 4 10 0 1 3 15 14 6 14 3 1 1 0 0 >SFIS2\Z23101\785..1324\540\g312619\Shigella flexneri\S.flexneri insertion sequence IS2 DNA./gene="ORF179"/codon_start=1/db_xref="PID:g312619"/db_xref="SWISS-PROT:Q54157"/transl_table=11 0 2 2 2 0 0 0 2 1 3 1 1 2 1 3 3 2 1 0 10 4 6 1 1 4 4 4 4 5 8 0 1 4 5 2 4 2 5 8 3 7 4 2 5 4 3 4 5 2 0 0 2 2 2 2 5 0 5 6 5 3 0 0 1 >SFKCPA\X13131\457..786\330\g47036\Shigella flexneri\Shigella flexneri kcpA gene involved in pathogenesis./codon_start=1/db_xref="PID:g47036"/db_xref="SWISS-PROT:P09120"/transl_table=11 0 3 0 5 0 0 0 1 6 1 1 0 0 1 0 1 3 0 0 2 0 4 1 0 2 0 2 1 1 8 0 4 0 2 1 0 0 6 9 2 3 1 4 2 0 0 12 2 4 2 1 2 0 0 1 0 0 3 1 3 1 1 0 0 >SFMXIEDC#1\X67206\209..841\633\g47041\Shigella flexneri\S.flexneri MXIE, MXID and MXIC (partial) genes./gene="MXIE"/codon_start=1/product="MXIE"/db_xref="PID:g47041"/db_xref="SWISS-PROT:Q04642"/transl_table=11 4 1 2 0 6 0 2 0 4 5 9 2 5 1 3 3 1 6 4 1 0 5 0 0 0 0 4 1 0 7 0 1 3 3 5 2 3 1 11 3 3 15 3 1 1 8 7 8 2 5 0 9 0 4 4 12 5 2 5 6 2 1 0 0 >SFMXIEDC#2\X67206\828..2528\1701\g47042\Shigella flexneri\S.flexneri MXIE, MXID and MXIC (partial) genes./gene="MXID"/codon_start=1/product="MXID"/db_xref="PID:g47042"/db_xref="SWISS-PROT:Q04641"/transl_table=11 1 3 1 3 8 4 0 4 7 9 22 15 17 2 3 22 5 13 13 3 6 11 8 2 4 6 9 2 4 10 11 2 5 10 10 3 5 22 24 9 7 43 13 8 1 4 21 12 7 20 4 19 0 0 2 19 28 7 23 7 3 1 0 0 >SFMXIGGN#2\Z48957\38..1153\1116\g929882\Shigella flexneri\S.flexneri mxiG gene and partial ipgF and mxiH genes./gene="mxiG"/codon_start=1/product="MxiG"/db_xref="PID:g929882"/transl_table=11 1 0 1 0 7 3 1 4 5 9 11 6 6 1 3 7 3 6 7 4 1 1 3 0 2 1 3 2 3 4 7 1 4 5 7 4 7 5 27 7 10 26 7 3 3 3 18 8 3 23 0 18 2 2 6 18 10 5 21 4 2 0 0 1 >SFPCN1AT\X03886\73..861\789\g47051\Shigella flexneri\Shigella flexneri 2a plasmid pCN1 aadA gene for adenyltransferase./codon_start=1/db_xref="PID:g47051"/db_xref="SWISS-PROT:P04826"/transl_table=11 2 8 1 1 1 3 4 3 7 6 1 10 1 3 4 0 3 1 2 5 6 2 4 2 6 2 6 7 5 9 3 8 0 2 9 5 6 6 4 4 2 3 3 6 3 3 16 10 7 11 3 3 0 0 1 4 1 9 7 2 6 1 0 0 >SFPHOB\X81000\481..1170\690\g531494\Shigella flexneri\S.flexneri PhoB gene./gene="phoB"/codon_start=1/db_xref="PID:g531494"/db_xref="SWISS-PROT:P45607"/transl_table=11 2 11 1 5 2 0 0 5 9 2 4 1 1 1 3 1 1 2 3 6 2 1 3 2 7 2 1 1 7 2 3 7 3 2 2 6 14 0 4 4 2 3 2 5 5 2 15 8 6 7 1 4 1 0 2 7 0 4 7 12 3 1 0 0 >SFRFBAJ#2\X71970\1107..2000\894\g454897\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="galF"/codon_start=1/db_xref="PID:g454897"/db_xref="SWISS-PROT:P37776"/transl_table=11 1 5 0 9 0 0 3 4 13 3 5 2 2 5 1 3 4 1 0 3 3 5 4 1 8 5 6 10 7 3 1 8 3 8 5 4 9 5 13 7 7 1 2 11 3 1 14 7 13 5 4 4 1 2 3 3 1 8 13 13 2 1 0 0 >SFRFBAJ#3\X71970\2373..3458\1086\g581659\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbB"/codon_start=1/db_xref="PID:g581659"/db_xref="SWISS-PROT:P37777"/transl_except=(pos:2373..2375,aa:Met)/transl_table=11 0 9 1 10 1 0 1 2 6 2 7 6 2 1 3 8 5 2 4 4 7 10 3 1 7 4 7 7 7 9 1 3 7 11 6 2 7 12 14 6 8 15 6 2 4 8 18 9 5 17 3 16 2 1 2 7 4 2 18 2 7 1 0 0 >SFRFBAJ#4\X71970\3458..4360\903\g454899\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbA"/codon_start=1/db_xref="PID:g454899"/db_xref="SWISS-PROT:P37778"/transl_table=11 0 5 0 5 1 0 1 3 10 8 5 5 1 2 0 0 2 0 7 9 7 3 3 7 3 2 10 7 9 14 6 4 3 10 4 5 5 7 14 2 9 10 3 5 4 5 12 1 5 10 4 4 3 1 7 6 3 1 7 3 8 1 0 0 >SFRFBAJ#5\X71970\4418..5290\873\g454900\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbC"/codon_start=1/db_xref="PID:g454900"/db_xref="SWISS-PROT:P37779"/transl_table=11 1 1 0 9 1 0 1 0 14 8 2 3 2 2 1 1 3 5 4 2 6 2 4 0 10 3 6 3 4 7 2 6 2 16 5 0 5 5 15 3 6 6 9 5 3 0 12 4 7 14 1 15 1 2 3 6 1 3 17 10 1 1 0 0 >SFRFBAJ#6\X71970\5295..5840\546\g454901\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbD"/codon_start=1/db_xref="PID:g454901"/db_xref="SWISS-PROT:P37780"/transl_table=11 1 2 2 2 0 0 1 0 3 2 3 2 4 0 1 2 2 2 2 0 0 2 3 0 2 2 1 0 1 5 4 2 2 5 7 2 2 9 11 4 2 8 5 3 1 2 10 5 2 9 1 4 1 1 4 11 4 0 6 3 4 0 0 1 >SFRFBAJ#7\X71970\5856..7112\1257\g454902\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbE"/codon_start=1/db_xref="PID:g454902"/db_xref="SWISS-PROT:P37781"/transl_table=11 3 1 0 3 4 3 7 2 6 7 19 12 7 2 4 11 3 7 5 2 0 4 5 1 3 3 18 5 4 10 6 5 8 10 8 5 6 12 18 1 3 15 5 1 0 6 9 3 1 8 0 17 3 4 6 28 18 9 28 8 6 1 0 0 >SFRFBAJ#8\X71970\7142..8032\891\g454903\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbF"/codon_start=1/db_xref="PID:g454903"/db_xref="SWISS-PROT:P37782"/transl_table=11 3 1 0 4 5 3 1 1 3 10 7 3 5 2 1 3 1 2 4 2 2 6 3 1 1 3 9 0 0 4 5 3 5 4 6 4 2 10 20 4 2 19 4 1 1 8 13 6 1 13 2 11 2 5 1 9 7 7 23 7 1 0 1 0 >SFRFBAJ#9\X71970\8061..8930\870\g454904\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbG"/codon_start=1/db_xref="PID:g454904"/db_xref="SWISS-PROT:P37783"/transl_table=11 2 0 3 0 5 1 0 0 2 4 13 6 7 1 2 0 3 4 3 0 3 3 3 1 1 0 8 1 2 7 1 2 4 5 4 2 3 2 20 7 6 20 8 3 0 2 11 1 3 18 2 17 2 5 2 15 9 5 16 3 6 1 0 0 >SFRFBAJ#10\X71970\8950..10098\1149\g454905\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfc"/codon_start=1/db_xref="PID:g454905"/db_xref="SWISS-PROT:P37784"/transl_table=11 2 1 0 1 5 1 4 2 6 13 32 12 12 2 1 5 2 8 10 2 1 5 3 2 0 4 3 1 3 2 8 6 1 10 7 5 2 10 15 1 1 18 3 1 1 1 6 4 2 7 4 13 0 4 8 41 25 4 19 8 2 1 0 0 >SFRFBAJ#11\X71970\10102..10476\375\g454906\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbI"/codon_start=1/db_xref="PID:g454906"/db_xref="SWISS-PROT:P37785"/transl_table=11 1 0 0 1 2 0 0 1 0 1 10 3 2 0 0 5 0 5 1 4 0 1 1 0 0 0 6 0 2 4 2 2 3 2 2 1 0 3 3 2 1 4 1 0 0 1 0 0 0 1 0 7 2 2 3 19 5 0 4 3 1 0 1 0 >SFRFBAJ#12\X71970\10539..10769\231\g454907\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rfbJ"/codon_start=1/db_xref="PID:g454907"/db_xref="SWISS-PROT:P37786"/transl_table=11 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 3 1 1 2 0 1 2 1 0 0 3 5 0 0 3 1 1 1 0 4 2 1 2 3 2 0 7 1 2 2 0 0 2 1 3 0 3 0 2 1 2 3 1 3 2 0 0 1 0 >SFRFBAJ#13\X71970\10985..11476\492\g454908\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="ORF10x9"/codon_start=1/db_xref="PID:g454908"/db_xref="SWISS-PROT:P37787"/transl_table=11 1 1 1 3 4 1 3 0 2 5 7 5 4 2 3 4 1 3 6 0 0 5 2 1 1 0 2 2 0 3 2 3 3 2 2 0 2 4 7 3 1 2 0 0 0 2 7 3 0 3 2 7 0 2 1 9 4 4 9 6 1 1 0 0 >SFRFBAJ#14\X71970\11647..12246\600\g506558\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="ORF11x6"/codon_start=1/db_xref="PID:g506558"/db_xref="SWISS-PROT:P37788"/transl_table=11 1 0 0 3 2 1 3 1 5 5 14 6 2 1 2 3 2 1 2 0 4 3 2 1 1 2 5 1 0 6 2 3 1 3 2 1 2 8 4 1 0 7 5 4 2 2 2 2 0 7 1 9 2 4 2 14 4 4 14 4 4 1 0 0 >SFRFBAJ#15\X71970\12347..12898\552\g581660\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="ORG12x3"/codon_start=1/db_xref="PID:g581660"/db_xref="SWISS-PROT:P37789"/transl_except=(pos:12347..12349,aa:Met)/transl_table=11 2 0 1 2 1 2 2 0 2 5 5 7 4 0 1 3 1 5 7 0 1 1 1 1 0 3 4 1 2 3 3 3 0 5 2 3 1 7 4 2 2 9 6 2 1 1 2 0 1 6 3 6 0 2 1 14 7 4 14 0 5 0 0 1 >SFRFBAJ#16\X71970\12895..13254\360\g581661\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="ORG12x8"/codon_start=1/db_xref="PID:g581661"/db_xref="SWISS-PROT:P37790"/transl_except=(pos:12895..12897,aa:Met)/transl_table=11 1 2 0 0 1 0 0 0 1 3 5 2 1 0 1 2 2 6 1 0 0 1 3 2 0 0 3 0 0 2 2 2 1 2 1 1 0 2 6 4 0 8 1 1 0 0 4 5 1 6 1 8 0 1 2 5 4 3 4 4 1 1 0 0 >SFRFBAJ#17\X71970\13363..14769\1407\g506561\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="gnd"/codon_start=1/db_xref="PID:g506561"/db_xref="SWISS-PROT:P37756"/transl_table=11 0 8 0 11 0 0 1 6 29 3 1 0 3 3 1 13 5 2 0 11 4 6 3 0 6 6 13 10 15 15 1 18 3 19 2 4 9 13 20 8 11 9 3 18 1 3 24 10 9 18 11 14 2 0 14 3 0 21 14 7 4 1 0 0 >SFRFBAJ#18\X71970\join(15019..15882,15885..16139)\1119\g530776\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="udg"/codon_start=1/db_xref="PID:g530776"/db_xref="SWISS-PROT:P37791"/transl_table=11 0 8 2 9 0 0 1 5 9 4 6 3 9 4 2 6 2 3 2 9 1 6 1 1 9 3 11 6 9 4 1 7 3 8 6 7 5 9 13 10 9 15 5 7 1 4 17 5 6 18 7 10 0 2 8 9 3 14 17 9 2 1 0 0 >SFRFBAJ#19\X71970\16285..17262\978\g530777\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="rol"/codon_start=1/db_xref="PID:g530777"/db_xref="SWISS-PROT:P37792"/transl_table=11 0 3 1 8 2 0 3 1 9 4 7 13 2 1 2 6 1 2 4 3 6 5 4 1 5 2 9 4 9 7 1 6 6 3 3 2 11 8 9 11 9 9 10 21 0 3 13 7 4 15 4 7 0 0 4 1 0 6 19 7 2 1 0 0 >SFRFBAJ#20\X71970\complement(17448..18059)\612\g506562\Shigella flexneri\S.flexneri bB, galF, rfbA-J, rfbX, gnd, udg, rol and rfc genes./gene="hisIE"/codon_start=1/db_xref="PID:g506562"/db_xref="SWISS-PROT:P37793"/transl_table=11 1 4 1 2 0 0 0 2 18 0 5 2 0 1 2 2 3 2 3 11 2 2 1 1 4 0 4 6 3 1 0 9 1 2 4 1 8 0 11 0 5 3 5 6 4 3 13 3 8 4 2 4 3 0 4 2 0 3 4 5 3 0 0 1 >SFSEPAGN\Z48219\262..4362\4101\g886953\Shigella flexneri\Shigella flexneri sepA gene./gene="sepA"/codon_start=1/db_xref="PID:g886953"/transl_table=11 2 9 4 15 7 5 2 10 67 18 9 5 17 24 7 21 38 25 21 43 30 22 7 2 15 6 26 36 17 31 48 25 30 47 14 21 24 32 60 18 38 56 11 46 7 15 24 19 42 43 16 38 2 0 26 23 9 12 35 26 18 0 0 1 >SFU04539\U04539\241..981\741\g532976\Shigella flexneri\Shigella flexneri 2a apyrase, ATP diphosphohydrolase gene, completecds./EC_number="3.6.1.5"/codon_start=1/function="ATP + 2H2O = AMP + 2 Orthophosphate"/product="ATP diphosphohydrolase, apyrase"/db_xref="PID:g532976"/transl_table=11 1 1 2 7 1 1 1 3 3 8 4 2 6 1 2 2 5 2 4 6 0 4 4 2 3 5 11 3 3 9 3 3 1 5 7 1 1 4 12 1 2 10 5 3 0 5 12 7 3 9 3 8 1 2 2 11 3 4 5 5 2 1 0 0 >SFU28354#1\U28354\55..381\327\g1016675\Shigella flexneri\Shigella flexneri invasion plasmid pWR100 ipgH ORFA and ipgH ORFBgenes, complete cds./gene="ipgH ORFA"/codon_start=1/db_xref="PID:g1016675"/transl_table=11 0 5 2 8 0 0 0 2 5 1 0 0 1 3 0 0 0 2 1 3 1 3 1 1 2 0 2 0 2 4 1 3 2 2 0 3 0 1 4 2 1 3 2 3 0 1 7 4 2 2 0 2 0 2 1 2 0 1 3 2 3 1 0 0 >SFU28354#2\U28354\381..1382\1002\g1016676\Shigella flexneri\Shigella flexneri invasion plasmid pWR100 ipgH ORFA and ipgH ORFBgenes, complete cds./gene="ipgH ORFB"/codon_start=1/db_xref="PID:g1016676"/transl_table=11 1 0 2 2 6 1 1 3 22 9 8 1 10 4 3 2 0 6 6 1 1 1 5 2 5 7 6 9 2 6 10 6 8 16 3 6 8 8 8 3 4 6 2 2 2 5 9 2 3 6 8 11 2 2 6 10 0 12 14 10 9 0 0 1 >SFU28354#3\U28354\complement(1767..2000)\234\g1016677\Shigella flexneri\Shigella flexneri invasion plasmid pWR100 ipgH ORFA and ipgH ORFBgenes, complete cds./codon_start=1/db_xref="PID:g1016677"/transl_table=11 1 2 1 2 0 0 0 2 2 1 2 0 1 0 1 1 1 0 2 2 1 0 0 1 2 0 3 2 2 0 1 0 2 0 1 1 2 0 3 1 1 2 1 4 0 2 4 2 2 0 0 2 0 1 5 0 2 1 1 4 0 1 0 0 >SFU29654\U29654\42..722\681\g912578\Shigella flexneri\Shigella flexneri positive transcriptional regulator CriR (criR)gene, complete cds./gene="criR"/codon_start=1/product="CriR"/db_xref="PID:g912578"/transl_table=11 2 5 1 6 2 1 5 2 10 2 3 3 0 0 0 1 5 3 1 6 6 2 2 4 3 3 4 7 6 4 2 4 4 4 2 0 7 3 4 4 2 3 4 6 3 6 11 6 5 5 1 8 1 1 2 5 2 4 11 7 0 0 0 1 >SFU32973\U32973\172..951\780\g1136230\Shigella flexneri\Shigella flexneri invasion plasmid antigen J (ipaJ) gene, completecds./gene="ipaJ"/codon_start=1/product="invasion plasmid antigen J"/db_xref="PID:g1136230"/transl_table=11 1 0 3 1 7 5 0 2 0 3 10 7 1 3 2 9 1 6 2 0 1 5 3 1 1 4 3 2 2 9 8 2 4 6 6 3 3 8 5 5 4 12 6 3 2 3 10 3 2 12 2 10 1 8 0 6 11 1 7 11 1 1 0 0 >SFU35656#1\U35656\186..4304\4119\g2114325\Shigella flexneri\Shigella flexneri 2a mucinase (she) gene and enterotoxin 1 (set1Aand set1B) genes, complete cds./gene="she"/codon_start=1/product="mucinase"/db_xref="PID:g2114325"/transl_table=11 2 6 9 18 6 7 0 5 67 19 5 6 14 13 6 17 29 31 33 40 24 12 7 8 19 12 29 49 14 32 39 27 27 62 19 21 24 29 52 23 46 52 5 37 6 22 24 13 55 42 15 35 2 2 24 28 13 18 32 21 18 0 0 1 >SFU35656#2\U35656\complement(1764..2297)\534\g1017741\Shigella flexneri\Shigella flexneri 2a mucinase (she) gene and enterotoxin 1 (set1Aand set1B) genes, complete cds./gene="set1A"/codon_start=1/product="enterotoxin 1"/db_xref="PID:g1017741"/transl_table=11 1 0 6 1 1 0 0 1 10 2 0 1 0 4 0 1 3 2 0 6 1 5 3 4 1 1 0 4 1 6 2 4 2 5 1 4 0 9 5 1 4 3 0 13 2 4 3 1 3 5 2 3 3 4 3 8 2 6 4 4 2 1 0 0 >SFU35656#3\U35656\complement(2301..2486)\186\g1017742\Shigella flexneri\Shigella flexneri 2a mucinase (she) gene and enterotoxin 1 (set1Aand set1B) genes, complete cds./gene="set1B"/codon_start=1/product="enterotoxin 1"/db_xref="PID:g1017742"/transl_table=11 2 0 2 1 1 0 0 1 1 1 0 0 0 3 0 0 0 0 0 1 1 2 0 1 0 2 0 0 0 2 0 1 0 2 0 5 0 4 1 0 0 3 0 3 2 0 0 0 2 1 0 0 1 2 2 1 2 2 4 2 0 0 0 1 >SFU46133#2\U46133\171..1706\1536\g1184262\Shigella flexneri\Shigella flexneri amino acid antiporter (gadC) gene, complete cds,and glutamate decarboxylase (gadB) gene, partial cds./gene="gadC"/codon_start=1/product="GadC"/db_xref="PID:g1184262"/transl_table=11 1 4 0 3 1 0 1 8 35 4 12 5 6 9 4 6 2 3 7 10 7 6 5 6 8 6 19 9 15 12 3 14 7 19 9 10 14 16 17 3 9 9 2 7 6 3 12 2 6 5 5 11 1 2 19 14 1 18 25 20 8 1 0 0 >SFU48775\U48775\215..1075\861\g1399173\Shigella flexneri\Shigella flexneri beta-lactamase gene, complete cds./codon_start=1/product="beta-lactamase"/db_xref="PID:g1399173"/transl_table=11 2 7 1 7 2 0 5 2 8 9 5 4 2 3 1 3 2 5 4 3 7 6 6 3 3 2 9 8 3 9 4 3 5 9 5 2 2 6 6 5 5 3 5 4 3 4 11 9 5 11 3 1 2 1 0 10 5 7 5 10 4 1 0 0 >SFU52684\U52684\169..798\630\g1279837\Shigella flexneri\Shigella flexneri enterobactin biosythesis (entD) gene, completecds./gene="entD"/function="enterobactin biosythesis"/codon_start=1/product="EntD"/db_xref="PID:g1279837"/transl_table=11 1 2 3 2 0 0 2 3 8 0 4 1 0 2 1 2 4 2 4 1 4 3 1 2 4 1 10 5 6 3 2 5 2 2 1 3 4 3 7 2 1 3 6 4 6 4 8 9 4 6 2 5 1 3 1 9 4 5 9 3 4 1 0 0 >SFU61977#1\U61977\393..791\399\g1508826\Shigella flexneri\Shigella flexneri Shf1 (shf1), Shf2 (shf2) genes, complete cds./gene="shf1"/codon_start=1/product="Shf1"/db_xref="PID:g1508826"/transl_table=11 0 1 3 1 0 1 0 2 3 2 5 3 2 0 0 3 2 1 4 1 0 0 0 3 2 2 1 1 0 1 4 2 2 2 2 1 1 4 7 2 4 3 2 1 1 7 6 2 2 4 1 4 3 0 2 7 1 0 5 3 3 0 0 1 >SFU61977#2\U61977\799..1236\438\g1508827\Shigella flexneri\Shigella flexneri Shf1 (shf1), Shf2 (shf2) genes, complete cds./gene="shf2"/codon_start=1/product="Shf2"/db_xref="PID:g1508827"/transl_table=11 2 2 3 0 6 0 0 0 3 4 2 6 2 0 1 2 2 3 6 2 1 2 1 0 3 1 1 1 0 3 4 0 2 2 1 2 0 1 8 3 2 1 1 3 0 7 13 0 1 4 0 9 2 2 2 5 2 0 1 4 4 1 0 0 >SFU73461\U73461\612..1559\948\g1809307\Shigella flexneri\Shigella flexneri SopA (sopA) gene, complete cds./gene="sopA"/function="outer membrane protease"/codon_start=1/product="SopA"/db_xref="PID:g1809307"/transl_table=11 1 2 0 2 4 1 3 3 4 7 5 1 1 4 0 7 3 15 6 6 2 8 2 3 1 4 9 0 3 4 7 4 6 11 3 1 1 6 22 3 7 17 4 5 1 6 9 6 4 9 8 13 1 1 5 9 8 3 13 3 8 0 0 1 >SFU82621#2\U82621\complement(1818..2636)\819\g2109261\Shigella flexneri\Shigella flexneri plasmid pMYSH6000, MsbB homolog (msbB) gene,partial cds, hypothetical protein gene, complete cds, TraD homolog(traD) pseudogene, parital sequence, TrbH homolog (trbH), putativeSTBORF2 (stborf2) and putative STBORF1 (stborf1) genes, completecds, and traI pseudogene, partial sequence./codon_start=1/product="hypothetical protein"/db_xref="PID:g2109261"/transl_table=11 2 6 6 9 2 4 3 3 13 1 0 1 4 2 1 3 5 1 6 1 6 2 4 1 4 2 6 6 4 5 4 3 2 7 4 3 2 4 10 4 7 8 1 13 5 3 7 11 4 5 9 6 2 3 5 3 2 7 4 7 4 1 0 0 >SFU82621#4\U82621\3198..3917\720\g2109262\Shigella flexneri\Shigella flexneri plasmid pMYSH6000, MsbB homolog (msbB) gene,partial cds, hypothetical protein gene, complete cds, TraD homolog(traD) pseudogene, parital sequence, TrbH homolog (trbH), putativeSTBORF2 (stborf2) and putative STBORF1 (stborf1) genes, completecds, and traI pseudogene, partial sequence./gene="trbH"/codon_start=1/product="TrbH homolog"/db_xref="PID:g2109262"/transl_table=11 1 0 1 4 1 4 0 4 11 5 2 2 2 8 3 4 3 3 2 5 8 3 1 3 6 1 3 4 3 5 1 8 3 4 2 3 4 7 7 1 4 7 1 8 3 8 0 2 4 6 0 5 6 6 6 6 5 6 6 5 3 0 0 1 >SFU82621#5\U82621\complement(3207..3605)\399\g2109263\Shigella flexneri\Shigella flexneri plasmid pMYSH6000, MsbB homolog (msbB) gene,partial cds, hypothetical protein gene, complete cds, TraD homolog(traD) pseudogene, parital sequence, TrbH homolog (trbH), putativeSTBORF2 (stborf2) and putative STBORF1 (stborf1) genes, completecds, and traI pseudogene, partial sequence./gene="stborf2"/function="Shigella virulence plasmid stability"/codon_start=1/product="putative STBORF2"/db_xref="PID:g2109263"/transl_table=110 3 2 4 2 1 0 2 7 1 0 0 0 1 1 0 3 2 1 4 1 2 1 1 0 2 4 4 0 3 2 3 3 2 0 3 3 2 3 2 5 2 1 4 1 1 6 3 2 4 1 1 1 1 0 6 3 4 4 6 1 0 0 1 >SFU82621#6\U82621\complement(3605..3832)\228\g2109264\Shigella flexneri\Shigella flexneri plasmid pMYSH6000, MsbB homolog (msbB) gene,partial cds, hypothetical protein gene, complete cds, TraD homolog(traD) pseudogene, parital sequence, TrbH homolog (trbH), putativeSTBORF2 (stborf2) and putative STBORF1 (stborf1) genes, completecds, and traI pseudogene, partial sequence./gene="stborf1"/function="Shigella virulence plasmid stability"/codon_start=1/product="putative STBORF1"/db_xref="PID:g2109264"/transl_table=111 2 0 0 2 2 0 1 1 0 0 1 1 0 0 0 4 0 1 4 1 0 2 1 1 0 1 1 2 1 3 1 0 0 2 3 1 2 2 0 3 0 1 2 1 0 6 2 2 2 0 0 0 0 2 2 0 1 2 3 2 0 0 1 >SFU89135\U89135\511..1050\540\g2062682\Shigella flexneri\Shigella flexneri type 1 fimbrial subunit (fimA) gene, completecds./gene="fimA"/codon_start=1/product="type 1 fimbrial subunit"/db_xref="PID:g2062682"/transl_table=11 0 0 0 4 1 0 0 1 11 0 1 1 0 2 1 3 2 4 5 10 5 4 0 0 2 0 13 6 4 11 2 4 2 6 1 0 1 13 4 2 5 4 3 8 1 0 1 1 2 8 0 3 2 0 3 3 0 3 5 1 0 1 0 0 >SFU97489\U97489\complement(821..2116)\1296\g2642472\Shigella flexneri\Shigella flexneri SBA1336 reverse transcriptase-like protein (sfiA)gene, complete cds./gene="sfiA"/codon_start=1/product="reverse transcriptase-like protein"/db_xref="PID:g2642472"/transl_table=11/IGNORED_CODON=2 5 12 12 6 5 6 3 9 25 2 4 2 6 2 3 0 3 11 5 7 5 2 3 5 4 3 5 15 11 5 2 13 3 6 2 9 11 7 19 7 10 3 7 9 5 7 11 10 6 14 9 6 1 2 10 6 3 17 4 12 12 1 0 0 >SFU97492\U97492\564..1382\819\g2642476\Shigella flexneri\Shigella flexneri SBA1336 IS600-like insertion element,hypothetical 31 KD protein gene, complete cds./codon_start=1/product="hypothetical 31 KD protein"/db_xref="PID:g2642476"/transl_table=11/IGNORED_CODON=2 2 6 6 9 2 4 3 3 14 1 0 1 4 2 1 2 5 1 6 1 6 3 4 1 3 1 6 6 4 4 4 2 2 7 4 3 2 4 10 4 7 8 1 13 5 3 7 11 4 5 9 6 2 3 5 4 2 7 4 7 4 1 0 0 >SFVIRB\X14340\260..1189\930\g47065\Shigella flexneri\Shigella flexneri 230 kb invasion plasmid virB gene./codon_start=1/db_xref="PID:g47065"/db_xref="SWISS-PROT:P11656"/transl_table=11 1 3 2 2 8 2 9 1 3 8 8 3 5 3 3 11 3 2 8 1 1 6 3 1 1 3 8 5 2 2 3 2 1 4 3 2 1 5 28 9 9 9 8 3 0 4 17 5 7 12 2 7 1 0 4 8 20 6 9 2 0 1 0 0 >SFVIRFP#1\X16661\197..985\789\g47067\Shigella flexneri\S.flexneri 2a 140-megadalton plasmid virF gene./codon_start=1/product="virF protein"/db_xref="PID:g47067"/db_xref="SWISS-PROT:Q04248"/transl_table=11 2 2 0 1 6 4 0 2 0 8 12 6 8 2 2 11 6 4 1 0 1 4 4 0 0 1 3 0 0 6 2 2 2 1 1 1 0 6 18 6 6 9 6 1 1 5 8 11 1 10 1 11 1 1 3 9 17 6 12 7 1 1 0 0 >SFVIRFP#2\X16661\complement(250..435)\186\g47068\Shigella flexneri\S.flexneri 2a 140-megadalton plasmid virF gene./codon_start=1/db_xref="PID:g47068"/transl_table=11 0 1 0 0 0 1 2 0 1 3 1 1 5 0 1 1 0 0 0 1 1 0 0 0 0 2 2 0 0 0 1 0 0 0 0 2 0 1 4 0 0 3 0 0 1 0 1 2 0 1 0 1 1 1 0 6 6 1 3 3 0 0 1 0 >SFVIRR\X66848 S45820\94..507\414\g47070\Shigella flexneri\S.flexneri virR gene./gene="virR"/codon_start=1/db_xref="PID:g47070"/db_xref="SWISS-PROT:P09120"/transl_table=11 0 3 0 7 1 0 0 1 8 4 1 0 0 1 0 1 4 0 1 2 1 5 1 0 2 0 4 1 2 8 0 4 0 2 1 0 0 6 10 2 5 1 4 3 0 0 17 2 4 2 1 2 0 1 1 0 0 4 2 4 1 1 0 0 >SHFCRP\M13772\1..633\633\g152731\Shigella flexneri\Shigella flexneri 2B crp gene encoding catabolite gene activatorprotein, complete cds./codon_start=1/db_xref="PID:g152731"/transl_table=11 0 3 0 8 0 0 0 3 15 2 0 2 1 3 1 4 2 0 1 4 3 5 2 0 4 0 6 1 4 2 1 9 0 6 2 3 7 2 12 3 4 1 5 9 4 2 13 3 5 3 5 1 1 2 2 3 0 7 10 7 2 1 0 0 >SHFDSBA\D38253\416..1042\627\g927224\Shigella flexneri\Shigella flexneri dsbA gene for disulfide oxidoreductase, completecds./gene="dsbA"/codon_start=1/product="disulfide oxidoreductase"/db_xref="PID:d1007986"/db_xref="PID:g927224"/transl_table=11 0 1 0 2 0 0 0 0 12 0 2 3 1 1 1 4 3 0 1 4 0 4 0 0 7 0 3 1 9 6 0 6 0 8 3 2 11 7 15 4 3 4 2 11 2 1 11 3 3 9 3 5 2 0 5 7 0 2 5 6 3 1 0 0 >SHFDSBB\D38254\630..1160\531\g927226\Shigella flexneri\Shigella flexneri dsbB gene for disulfide oxidoreductase, completecds./gene="dsbB"/codon_start=1/product="disulfide oxidoreductase"/db_xref="PID:d1007987"/db_xref="PID:g927226"/transl_table=11 1 1 1 6 0 0 0 3 16 1 4 4 1 1 1 1 0 1 0 2 1 3 0 0 8 2 2 4 8 3 0 5 2 5 1 2 7 3 5 1 1 0 3 6 1 1 4 2 0 5 2 4 3 3 5 8 0 3 5 8 6 1 0 0 >SHFENTC#2\M63306\295..576\282\g152734\Shigella flexneri\S.flexneri SA101 fepB gene, 3' end, and entC gene, complete cds./gene="entC"/codon_start=1/db_xref="PID:g152734"/transl_table=11 0 2 0 2 0 0 0 1 3 1 0 0 2 1 4 0 0 2 1 1 3 0 1 5 3 1 1 4 4 2 1 1 2 0 1 1 2 0 3 0 1 2 1 5 0 0 3 1 1 5 1 1 0 1 5 4 0 1 2 4 0 0 1 0 >SHFFLICSF1\D16819\142..1794\1653\g391898\Shigella flexneri\Shigella flexneri fliC-SF gene for flagellin, complete cds./gene="fliC-SF"/codon_start=1/product="flagellin"/db_xref="PID:d1004612"/db_xref="PID:g391898"/transl_table=11 0 3 0 9 0 0 1 3 22 1 2 8 5 13 7 19 7 9 12 18 10 23 0 1 3 0 19 9 15 25 5 14 5 23 8 4 9 15 23 7 30 16 3 26 0 0 8 4 16 32 5 8 0 0 5 5 0 13 19 3 0 1 0 0 >SHFGALU#1\L32811\234..1142\909\g487881\Shigella flexneri\Shigella flexneri UDP-glucose pyrophosphorylase (galU) gene,complete cds and virR gene, partial cds./gene="galU"/EC_number="2.7.7.9"/codon_start=1/evidence=experimental/product="UDP-glucose pyrophosphorylase"/db_xref="PID:g487881"/transl_table=11 0 2 0 5 0 1 0 2 11 5 4 5 2 1 0 4 4 1 1 6 5 2 3 1 12 2 5 6 9 7 4 6 1 10 7 3 10 13 17 4 4 4 3 6 5 4 23 3 2 15 4 3 2 3 1 4 0 5 16 12 2 1 0 0 >SHFIGPGDEF#1\L04309\372..1988\1617\g310374\Shigella flexneri\Shigella flexneri ipgD, ipgE, ipgF genes, complete cds./gene="ipgD"/codon_start=1/db_xref="PID:g310374"/transl_table=11 2 0 1 3 14 2 7 1 3 8 24 12 11 2 4 12 8 9 6 4 5 8 5 1 4 2 9 3 4 12 14 4 12 15 9 3 11 9 44 14 7 37 10 8 2 8 22 16 5 14 0 14 2 5 1 12 18 4 13 13 6 1 0 0 >SHFIGPGDEF#2\L04309\1998..2360\363\g310375\Shigella flexneri\Shigella flexneri ipgD, ipgE, ipgF genes, complete cds./gene="ipgE"/codon_start=1/db_xref="PID:g310375"/transl_table=11 3 0 0 2 1 0 3 0 1 3 6 3 2 0 1 0 1 0 1 1 0 1 0 0 0 3 3 1 3 1 2 1 2 1 1 0 2 2 1 3 0 7 1 0 0 0 9 1 0 15 1 6 3 1 1 2 6 3 5 3 1 1 0 0 >SHFIGPGDEF#3\L04309\2360..2818\459\g310376\Shigella flexneri\Shigella flexneri ipgD, ipgE, ipgF genes, complete cds./gene="ipgF"/codon_start=1/db_xref="PID:g310376"/transl_table=11 1 1 1 1 6 2 1 0 1 2 5 3 1 2 0 5 1 3 0 0 1 0 3 0 1 0 7 1 2 3 6 0 2 2 2 1 0 2 8 5 1 10 1 1 0 4 6 5 1 4 2 7 0 3 1 5 4 2 4 7 2 1 0 0 >SHFIPABCD#1\J04117\606..1073\468\g152741\Shigella flexneri\S.flexneri ipaBCD region encoding invasion plasmid antigens./codon_start=1/db_xref="PID:g152741"/transl_table=11 0 0 1 0 1 1 0 2 1 2 5 2 2 0 0 3 2 0 2 1 0 2 1 1 0 1 9 1 0 7 4 1 0 0 4 1 0 1 10 1 2 6 5 4 1 1 7 3 7 7 5 6 1 2 5 4 4 3 9 4 0 1 0 0 >SHFIPABCD#2\J04117\1079..2821\1743\g152742\Shigella flexneri\S.flexneri ipaBCD region encoding invasion plasmid antigens./codon_start=1/db_xref="PID:g152742"/transl_table=11 0 0 1 1 8 1 13 11 8 18 20 6 13 8 4 18 4 6 13 10 2 20 4 1 1 2 37 9 4 19 10 7 3 8 7 5 0 18 45 5 14 22 25 12 1 3 30 5 10 14 0 4 0 1 5 10 13 9 20 11 1 0 0 1 >SHFIPABCD#3\J04117\2784..3932\1149\g152743\Shigella flexneri\S.flexneri ipaBCD region encoding invasion plasmid antigens./codon_start=1/db_xref="PID:g152743"/transl_table=11 1 2 1 2 3 0 4 2 5 14 12 6 14 7 1 15 5 8 15 6 2 13 5 2 0 0 12 8 5 10 3 3 3 8 4 2 0 6 24 6 9 16 24 10 1 4 13 8 4 12 1 3 1 0 1 2 7 5 17 5 0 1 0 0 >SHFIPABCD#4\J04117\3983..4981\999\g152744\Shigella flexneri\S.flexneri ipaBCD region encoding invasion plasmid antigens./codon_start=1/db_xref="PID:g152744"/transl_table=11 0 0 0 0 3 1 5 3 3 11 10 4 9 7 2 7 4 12 12 6 2 7 4 1 2 1 9 7 0 3 7 3 1 4 5 2 2 8 21 5 10 23 10 5 0 7 16 3 4 14 1 9 0 1 3 3 7 4 7 8 4 0 0 1 >SHFIPAH#1\M32063\251..1849\1599\g152747\Shigella flexneri\S.flexner invasion plasmid antigen H (ipaH) gene, complete cds./codon_start=1/db_xref="PID:g152747"/transl_table=11 4 8 4 8 6 7 2 15 22 13 14 7 12 10 3 12 3 5 9 8 3 10 6 4 6 4 11 10 6 16 5 7 1 3 5 7 8 7 12 6 12 22 9 21 2 12 30 17 12 14 6 7 1 2 11 14 4 1 10 8 8 1 0 0 >SHFIPAHZ\M76445\1..1725\1725\g152752\Shigella flexneri\Shigella flexneri ipaH gene, 5'end./gene="ipaH"/codon_start=1/product="antigen"/db_xref="PID:g152752"/transl_table=11 3 11 4 13 8 4 10 17 21 13 16 11 11 14 5 11 5 3 11 9 5 9 11 3 7 6 10 10 7 13 5 7 1 6 6 8 7 7 10 5 10 25 9 21 2 11 32 18 11 14 6 4 0 7 11 9 8 5 10 8 10 0 0 1 >SHFISPA\D42071\61..600\540\g1754527\Shigella flexneri\Shigella flexneri ispA gene for intracellular septation A, completecds./gene="ispA"/codon_start=1/evidence=experimental/product="intracellular septation A"/db_xref="PID:d1008250"/db_xref="PID:g1754527"/transl_table=11 0 2 1 1 0 0 2 1 13 4 5 2 0 1 1 0 3 1 2 2 3 3 0 0 6 0 3 5 4 3 0 2 0 3 1 8 3 6 5 7 2 3 3 3 2 0 2 2 1 3 3 5 1 0 7 11 0 10 6 5 7 1 0 0 >SHFMXIA\M91664\347..2347\2001\g152763\Shigella flexneri\Shigella flexneri MxiA gene, complete cds./gene="MxiA"/codon_start=1/function="facilitates export of Shigella virulence factors"/db_xref="PID:g152763"/transl_table=11 2 3 2 8 13 6 6 4 6 16 24 18 13 3 3 20 3 16 13 4 3 13 3 1 2 7 13 4 5 20 13 4 5 19 11 9 5 29 20 8 4 26 8 8 1 5 24 13 5 34 1 17 0 2 9 29 32 3 46 20 2 0 1 0 >SHFMXIHIJK#1\M98390\188..439\252\g152765\Shigella flexneri\Shigella flexneri lipoprotein (mxiJ) gene, complete cds; mxiH gene,mxiI gene, complete cds's; mxiK gene, 5' end of cds./gene="mxiH"/codon_start=1/db_xref="PID:g152765"/transl_table=11 0 0 0 0 1 1 2 0 1 0 5 3 1 1 1 2 0 3 6 0 0 2 1 0 1 1 2 0 1 3 1 0 0 1 1 0 2 2 4 1 2 4 5 1 0 0 4 0 0 7 1 2 0 0 1 1 0 0 3 1 1 1 0 0 >SHFMXIHIJK#2\M98390\452..745\294\g152766\Shigella flexneri\Shigella flexneri lipoprotein (mxiJ) gene, complete cds; mxiH gene,mxiI gene, complete cds's; mxiK gene, 5' end of cds./gene="mxiI"/codon_start=1/db_xref="PID:g152766"/transl_table=11 0 0 0 0 1 0 0 1 1 0 6 1 6 0 2 3 1 3 2 0 3 1 3 0 0 0 1 2 0 3 1 1 0 0 3 2 1 3 3 3 1 4 4 2 0 0 4 2 1 5 1 3 0 0 0 1 3 1 4 4 0 1 0 0 >SHFMXIHIJK#3\M98390\751..1476\726\g152767\Shigella flexneri\Shigella flexneri lipoprotein (mxiJ) gene, complete cds; mxiH gene,mxiI gene, complete cds's; mxiK gene, 5' end of cds./gene="mxiJ"/codon_start=1/function="involved in the secretion of the IPA antigens"/evidence=experimental/product="lipoprotein"/db_xref="PID:g152767"/transl_table=11 1 2 1 2 5 1 3 1 2 2 10 7 5 0 4 11 1 2 5 1 0 2 2 0 4 2 5 1 0 5 2 0 4 4 6 3 2 12 12 6 2 9 6 3 0 3 15 5 1 7 1 8 0 1 3 7 10 3 10 7 2 0 0 1 >SHFMXIME#1\M98391\35..463\429\g152770\Shigella flexneri\Shigella flexneri lipoprotein (mxiM) gene, complete cds; mxiE gene,5' end of cds./gene="mxiM"/codon_start=1/function="probably invovled in the secretion of IPA antigens"/evidence=experimental/product="lipoprotein"/db_xref="PID:g152770"/transl_table=11 2 0 0 0 0 0 2 0 2 1 8 2 2 0 1 5 0 7 2 2 0 0 1 0 0 1 2 0 1 2 0 1 5 4 2 0 0 7 10 8 1 10 1 0 0 2 4 1 1 7 1 2 1 2 2 6 8 1 6 4 2 1 0 0 >SHFPMYSH#1\D13663\612..1013\402\g303888\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./codon_start=1/db_xref="PID:d1003329"/db_xref="PID:g303888"/transl_table=11 0 0 0 1 2 1 0 0 2 4 11 1 3 0 0 3 2 5 1 1 1 0 2 0 0 2 2 0 1 4 0 0 2 1 2 2 0 7 2 0 3 7 1 4 1 3 1 6 2 8 2 3 0 1 1 4 2 1 11 6 1 1 0 0 >SHFPMYSH#2\D13663\1017..2309\1293\g303889\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa47"/codon_start=1/db_xref="PID:d1003330"/db_xref="PID:g303889"/transl_table=11 5 0 2 5 9 7 4 5 1 10 16 8 4 2 5 9 7 7 10 0 4 11 3 2 3 7 10 10 2 13 12 4 5 11 7 2 1 18 13 7 4 9 6 7 0 6 19 14 1 22 4 12 0 5 0 19 8 3 24 6 0 1 0 0 >SHFPMYSH#3\D13663\2402..2740\339\g303890\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa13"/codon_start=1/db_xref="PID:d1003331"/db_xref="PID:g303890"/transl_table=11 1 0 1 1 5 1 1 0 3 4 3 2 1 0 0 2 0 3 1 0 0 0 0 0 0 1 2 1 0 3 1 3 0 0 2 0 1 1 10 4 1 4 4 4 0 2 4 6 1 5 1 2 0 1 2 1 4 2 9 1 0 1 0 0 >SHFPMYSH#4\D13663\2727..3605\879\g303891\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa32"/codon_start=1/db_xref="PID:d1003332"/db_xref="PID:g303891"/transl_table=11 1 0 0 0 4 3 5 1 2 2 5 5 8 1 0 12 2 12 2 1 0 4 3 0 1 3 5 1 2 4 6 2 3 4 3 0 1 7 19 10 5 26 7 3 2 6 18 5 5 16 3 5 1 1 2 10 7 4 15 6 1 1 0 0 >SHFPMYSH#5\D13663\3599..4480\882\g303892\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa33"/codon_start=1/db_xref="PID:d1003333"/db_xref="PID:g303892"/transl_table=11 0 1 1 3 2 1 3 1 4 6 16 5 7 2 3 13 0 5 6 0 1 7 1 1 1 0 4 0 0 2 1 1 5 7 10 2 3 7 16 5 2 17 4 4 1 7 13 9 5 10 1 8 3 4 4 13 4 6 18 5 2 1 0 0 >SHFPMYSH#6\D13663\4485..5135\651\g303893\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa24"/codon_start=1/db_xref="PID:d1003334"/db_xref="PID:g303893"/transl_table=11 1 0 0 2 0 1 3 3 2 8 7 9 4 2 0 7 1 4 4 1 1 1 5 1 0 3 6 1 3 7 0 2 1 7 4 1 1 8 6 5 0 9 4 2 0 1 8 2 1 9 1 9 0 1 3 12 5 5 10 11 1 0 1 0 >SHFPMYSH#7\D13663\5150..5410\261\g303894\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa9"/codon_start=1/db_xref="PID:d1003335"/db_xref="PID:g303894"/transl_table=11 0 0 0 0 0 0 1 1 0 6 6 3 1 1 0 5 0 1 2 0 1 1 1 0 0 1 0 0 0 2 2 0 1 6 1 1 2 4 0 3 0 1 2 2 0 1 1 2 0 1 0 3 0 1 0 4 6 2 3 2 2 0 0 1 >SHFPMYSH#8\D13663\5410..6180\771\g303895\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa29"/codon_start=1/db_xref="PID:d1003336"/db_xref="PID:g303895"/transl_table=11 0 0 0 2 4 0 3 4 2 9 14 6 6 2 1 15 2 7 2 0 2 4 3 1 2 3 6 2 0 5 1 2 1 9 6 2 2 12 4 2 3 7 3 3 0 4 6 1 3 2 2 2 2 2 9 24 10 2 16 5 2 1 0 0 >SHFPMYSH#9\D13663\6187..7215\1029\g303896\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./gene="spa40"/codon_start=1/db_xref="PID:d1003337"/db_xref="PID:g303896"/transl_table=11 1 0 0 4 5 2 4 2 3 11 11 6 5 1 2 5 1 4 10 1 1 8 3 0 3 4 8 2 2 4 2 2 3 3 5 3 7 13 24 9 4 7 2 6 2 4 10 10 3 12 3 8 0 2 8 25 15 2 25 7 3 1 0 0 >SHFPMYSH#10\D13663\7228..7470\243\g303897\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./codon_start=1/db_xref="PID:d1003338"/db_xref="PID:g303897"/transl_table=11 0 0 0 1 2 0 0 1 2 1 2 2 1 2 0 4 1 0 1 0 0 0 1 0 0 1 0 0 0 2 1 0 0 1 1 1 0 4 3 2 2 5 0 1 0 0 5 2 2 4 0 2 0 4 2 1 5 1 5 2 0 1 0 0 >SHFPMYSH#11\D13663\7587..7856\270\g303898\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 DNA, region-5 containing 11ORFs, complete cds./codon_start=1/db_xref="PID:d1003339"/db_xref="PID:g303898"/transl_table=11 2 1 0 2 3 1 1 0 2 3 6 0 2 1 0 2 0 5 0 2 0 1 1 1 0 0 2 0 0 1 2 0 0 0 1 0 0 3 5 4 1 4 1 1 0 2 0 2 1 5 2 3 1 1 1 1 5 1 2 1 0 0 1 0 >SHFRFBAB#2\L14842\763..1848\1086\g294896\Shigella flexneri\Shigella flexneri dTDP-D-glucose 4,6-dehydratase (rfbB) gene,dTDP-6-deoxy-D-glucose-3,5 epimerase (rfbC) gene,glucose-1-phosphate thymidylyltransferase (rfbA) gene,dTDP-6-deoxy-L-mannose-dehydrogenase (rfbD) gene, complete cds, andorf2.8, 3' end./gene="rfbB"/codon_start=1/transl_table=11/product="dTDP-D-glucose 4,6-dehydratase"/db_xref="PID:g294896"/transl_except=(pos:763..765,aa:Met) 0 6 1 10 0 0 1 2 6 3 7 6 2 1 3 8 6 3 3 4 6 9 4 1 7 3 7 6 10 10 1 4 6 11 6 2 7 12 14 5 7 14 5 4 5 8 18 9 6 17 4 16 2 1 3 6 4 2 18 2 7 1 0 0 >SHFRFBAB#3\L14842\1848..2747\900\g294897\Shigella flexneri\Shigella flexneri dTDP-D-glucose 4,6-dehydratase (rfbB) gene,dTDP-6-deoxy-D-glucose-3,5 epimerase (rfbC) gene,glucose-1-phosphate thymidylyltransferase (rfbA) gene,dTDP-6-deoxy-L-mannose-dehydrogenase (rfbD) gene, complete cds, andorf2.8, 3' end./gene="rfbC"/codon_start=1/transl_table=11/product="dTDP-6-deoxy-D-glucose-3,5 epimerase"/db_xref="PID:g294897" 0 6 0 5 1 0 2 3 9 7 4 5 1 2 0 1 2 0 7 7 7 3 5 4 3 2 11 7 9 17 3 4 4 9 4 5 6 7 13 2 10 10 3 5 4 5 19 1 3 9 4 4 3 1 6 5 2 2 7 3 6 1 0 0 >SHFRFBAB#4\L14842\2806..3684\879\g294898\Shigella flexneri\Shigella flexneri dTDP-D-glucose 4,6-dehydratase (rfbB) gene,dTDP-6-deoxy-D-glucose-3,5 epimerase (rfbC) gene,glucose-1-phosphate thymidylyltransferase (rfbA) gene,dTDP-6-deoxy-L-mannose-dehydrogenase (rfbD) gene, complete cds, andorf2.8, 3' end./gene="rfbA"/codon_start=1/transl_table=11/product="glucose-1-phosphate thymidylyltransferase"/db_xref="PID:g294898" 1 1 0 9 1 0 1 0 14 9 2 3 1 2 0 2 3 6 4 2 6 2 3 0 10 2 7 2 5 7 2 4 5 16 5 1 5 5 15 2 6 5 9 5 3 1 13 5 5 14 1 15 1 1 3 6 1 3 18 10 2 1 0 0 >SHFRFBAB#5\L14842\3689..4234\546\g294899\Shigella flexneri\Shigella flexneri dTDP-D-glucose 4,6-dehydratase (rfbB) gene,dTDP-6-deoxy-D-glucose-3,5 epimerase (rfbC) gene,glucose-1-phosphate thymidylyltransferase (rfbA) gene,dTDP-6-deoxy-L-mannose-dehydrogenase (rfbD) gene, complete cds, andorf2.8, 3' end./gene="rfbD"/codon_start=1/transl_table=11/product="dTDP-6-deoxy-L-mannose-dehydrogenase"/db_xref="PID:g294899" 1 2 2 2 0 0 1 0 3 2 3 2 4 0 1 2 2 2 2 0 0 2 3 0 2 2 1 0 1 5 4 2 2 5 7 2 2 9 11 4 2 8 5 3 1 2 10 5 2 9 1 4 1 1 4 11 4 0 6 3 4 0 0 1 >SHFSPA#1\M81458\612..1013\402\g152791\Shigella flexneri\S.flexneri spa15, spa47, spa32, spa33, and spa24 genes, completecds./codon_start=1/product="spa15"/db_xref="PID:g152791"/transl_table=11 0 0 0 1 2 1 0 0 2 4 11 1 3 0 0 3 2 5 1 1 1 0 2 0 0 2 2 0 1 4 0 0 2 1 2 2 0 7 2 0 3 7 1 4 1 3 1 6 2 8 2 3 0 1 1 4 2 1 11 6 1 1 0 0 >SHFSPA#2\M81458\1017..2309\1293\g152792\Shigella flexneri\S.flexneri spa15, spa47, spa32, spa33, and spa24 genes, completecds./codon_start=1/product="spa47"/db_xref="PID:g152792"/transl_table=11 5 0 2 5 9 7 4 5 1 10 16 8 3 2 5 10 7 7 10 0 4 11 3 2 3 7 10 10 2 13 12 4 5 11 7 2 1 18 13 7 4 9 6 7 0 6 19 14 1 22 4 12 0 5 0 19 8 3 24 6 0 1 0 0 >SHFSPA#3\M81458\2727..3605\879\g152793\Shigella flexneri\S.flexneri spa15, spa47, spa32, spa33, and spa24 genes, completecds./codon_start=1/product="spa32"/db_xref="PID:g152793"/transl_table=11 1 0 0 0 4 3 5 1 2 2 5 5 8 1 0 12 2 12 2 1 0 4 3 0 1 3 5 1 2 4 6 2 3 4 3 0 1 7 19 10 5 26 7 3 2 6 18 5 5 16 3 5 1 1 2 10 7 4 15 6 1 1 0 0 >SHFSPA#4\M81458\3599..4480\882\g152794\Shigella flexneri\S.flexneri spa15, spa47, spa32, spa33, and spa24 genes, completecds./codon_start=1/product="spa33"/db_xref="PID:g152794"/transl_table=11 0 1 1 3 2 1 3 1 4 6 17 5 6 2 3 13 0 5 6 0 1 7 1 1 1 0 4 0 0 2 1 1 5 7 10 2 3 7 16 5 2 17 4 4 1 7 13 9 5 10 1 8 3 4 4 13 4 6 18 5 2 1 0 0 >SHFSPA#5\M81458\4485..5135\651\g152795\Shigella flexneri\S.flexneri spa15, spa47, spa32, spa33, and spa24 genes, completecds./codon_start=1/product="spa24"/db_xref="PID:g152795"/transl_table=11 1 0 0 2 0 1 3 3 2 8 7 9 4 2 0 7 1 4 4 1 1 1 5 1 0 3 6 1 3 7 0 2 1 7 4 1 1 8 6 5 0 9 4 2 0 1 8 2 1 9 1 9 0 1 3 12 5 5 10 11 1 0 1 0 >SHFVACB#1\D11024\210..635\426\g912442\Shigella flexneri\Shigella flexneri vacB gene./codon_start=1/product="ORF-1"/db_xref="PID:d1002251"/db_xref="PID:g912442"/transl_table=11 0 2 1 5 0 1 0 0 6 5 4 4 1 1 1 2 1 6 1 1 3 3 1 1 2 1 1 4 4 1 2 4 1 2 0 3 8 2 5 1 1 5 3 2 1 1 4 5 1 4 5 1 2 1 1 2 2 2 4 3 0 0 0 1 >SHFVACB#2\D11024\674..2956\2283\g391901\Shigella flexneri\Shigella flexneri vacB gene./gene="vacB"/codon_start=1/evidence=experimental/product="ORF-2"/db_xref="PID:d1002252"/db_xref="PID:g391901"/transl_table=11 2 28 4 35 3 2 1 8 49 1 5 6 3 5 14 5 12 5 0 16 8 5 3 1 21 6 9 13 32 5 1 26 9 16 8 17 13 15 30 8 11 4 7 27 13 13 45 19 27 23 15 12 5 4 17 13 0 11 21 18 5 1 0 0 >SHFVACC#1\D26469\215..1342\1128\g599588\Shigella flexneri\Shigella flexneri genes for VacC and ORF./gene="vacC"/codon_start=1/product="VacC"/db_xref="PID:d1006024"/db_xref="PID:g599588"/transl_table=11 3 11 0 16 0 0 0 5 12 5 5 4 1 1 2 3 4 2 0 11 3 3 3 0 12 5 4 2 6 5 1 21 2 13 7 4 6 7 14 4 9 4 2 9 5 5 14 9 11 20 11 3 3 5 7 10 3 9 11 14 4 1 0 0 >SHFVACC#2\D26469\1365..1697\333\g599589\Shigella flexneri\Shigella flexneri genes for VacC and ORF./codon_start=1/product="ORF"/db_xref="PID:d1006025"/db_xref="PID:g599589"/transl_table=11 0 2 0 2 0 0 0 0 9 0 0 2 0 1 0 2 2 0 0 4 2 1 1 0 3 0 2 2 6 2 0 3 0 6 6 1 1 3 6 3 2 1 1 2 1 0 4 0 3 2 1 1 0 0 4 2 0 2 6 6 0 1 0 0 >SHFVACJ\D16293\917..1672\756\g904221\Shigella flexneri\Shigella flexneri vacJ gene, complete cds./function="intercellular spreading"/codon_start=1/product="VacJ"/db_xref="PID:d1004315"/db_xref="PID:g904221"/transl_table=11 1 6 1 6 0 0 0 1 11 8 4 3 0 4 2 3 2 2 1 5 4 3 0 0 11 5 1 1 9 5 1 7 8 10 1 3 5 6 4 1 10 3 4 9 2 2 10 0 4 14 6 6 0 1 10 4 0 3 5 9 4 1 0 0 >SHFVIRA#1\D26468\773..1975\1203\g1255688\Shigella flexneri\Plasmid pMYSH6000 (from Shigella flexneri 2a) virA region gene,complete cds./gene="virA"/codon_start=1/product="VirA protein"/db_xref="PID:d1006022"/db_xref="PID:g1255688"/transl_table=11 2 1 1 1 2 2 9 3 1 9 6 3 18 3 3 10 6 9 11 0 1 11 8 3 1 6 9 6 0 4 6 3 4 2 5 2 1 10 23 1 15 17 14 1 7 6 19 3 8 13 4 6 2 6 9 10 21 6 16 7 4 1 0 0 >SHFVIRA#2\D26468\2479..3042\564\g1255689\Shigella flexneri\Plasmid pMYSH6000 (from Shigella flexneri 2a) virA region gene,complete cds./codon_start=1/product="21k"/db_xref="PID:d1006023"/db_xref="PID:g1255689"/transl_table=11 2 5 4 8 2 0 0 2 11 1 2 1 3 1 0 0 1 2 0 2 4 4 4 0 6 0 4 7 4 2 1 4 2 5 5 5 6 5 6 4 1 2 3 9 3 7 3 3 3 6 7 1 2 3 0 1 1 1 1 3 2 1 0 0 >SHFVIRF#1\M29172\197..985\789\g152801\Shigella flexneri\S.flexneri 2a plasmid virF locus encoding two ORF's, complete cds./codon_start=1/db_xref="PID:g152801"/transl_table=11 2 2 0 1 6 4 0 2 0 8 12 6 8 2 2 11 6 4 1 0 1 4 4 0 0 1 3 0 0 6 2 2 2 1 1 1 0 6 18 6 6 9 6 1 1 5 8 11 1 10 1 11 1 1 3 9 17 6 12 7 1 1 0 0 >SHFVIRF#2\M29172\complement(250..435)\186\g455356\Shigella flexneri\S.flexneri 2a plasmid virF locus encoding two ORF's, complete cds./codon_start=1/db_xref="PID:g455356"/transl_table=11 0 1 0 0 0 1 2 0 1 3 1 1 5 0 1 1 0 0 0 1 1 0 0 0 0 2 2 0 0 0 1 0 0 0 0 2 0 1 4 0 0 3 0 0 1 0 1 2 0 1 0 1 1 1 0 6 6 1 3 3 0 0 1 0 >SHFVIRH\D10999\287..2347\2061\g216942\Shigella flexneri\Shigella flexneri plasmid virulence protein (virH) gene, completecds./gene="virH"/function="excretion of IpaB, IpaC and IpaD"/codon_start=1/product="virulence protein"/db_xref="PID:d1002246"/db_xref="PID:g216942"/transl_table=11 2 3 1 7 13 6 6 4 6 17 26 18 13 3 3 21 4 17 13 4 2 14 3 1 2 8 13 4 6 21 13 4 5 19 12 9 7 30 20 10 4 26 9 9 1 5 25 13 5 34 2 16 0 2 9 30 33 5 47 19 2 0 1 0 >SHFVIRK\D11025\373..1323\951\g216944\Shigella flexneri\Shigella flexneri plasmid pMYSH6000 virulence protein (virK) gene,complete cds./gene="virK"/codon_start=1/product="virulence protein"/db_xref="PID:d1002253"/db_xref="PID:g216944"/transl_table=11 7 4 8 1 3 1 1 1 5 3 6 13 7 3 1 7 1 7 2 5 1 2 5 3 3 3 7 5 1 7 6 1 7 3 4 5 3 5 17 2 2 8 7 6 3 6 8 8 3 9 6 11 2 7 8 14 4 5 14 4 5 1 0 0 >SHIGKATF\U00119\294..1382\1089\g391964\Shigella flexneri\Shigella flexneri RNA polymerase sigma factor (rpoS) gene completecds./gene="rpoS"/codon_start=1/evidence=experimental/product="RNA polymerase sigma factor"/db_xref="PID:g391964"/transl_table=11 3 11 3 17 0 2 0 3 23 7 5 9 4 2 2 1 5 4 3 7 6 2 4 1 6 0 6 8 8 2 3 4 4 11 10 4 2 7 7 7 8 5 7 10 1 3 24 16 9 14 4 5 0 1 8 3 1 11 10 6 3 1 0 0 .